Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.14□□□□□ -1.119e-23■■□□□ 11.4
RPS3P23396 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.08□□□□□ -1.122e-6■■□□□ 11.4
RPS3P23396 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.88□□□□□ -1.152e-6■■□□□ 11.4
RPS3P23396 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.162e-6■■□□□ 11.4
RPS3P23396 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.74□□□□□ -1.172e-6■■□□□ 11.4
RPS3P23396 HNRNPA1-208ENST00000548688 711 ntTSL 37.31□□□□□ -1.249e-23■■□□□ 11.4
RPS3P23396 HNRNPA1-210ENST00000550994 569 ntTSL 46.8□□□□□ -1.327e-23■■□□□ 11.4
RPS3P23396 HNRNPA1-207ENST00000547870 920 ntTSL 36.12□□□□□ -1.439e-23■■□□□ 11.4
RPS3P23396 DCTN1-222ENST00000492717 371 ntTSL 25.59□□□□□ -1.512e-6■■□□□ 11.4
RPS3P23396 PRMT5-226ENST00000557443 337 ntTSL 35.53□□□□□ -1.523e-6■■□□□ 11.4
RPS3P23396 HERPUD1-212ENST00000567944 435 ntTSL 22.27□□□□□ -2.052e-6■■□□□ 11.4
RPS3P23396 HNRNPA1-213ENST00000551702 481 ntTSL 31.7□□□□□ -2.149e-23■■□□□ 11.4
RPS3P23396 IPO4-218ENST00000561199 3249 ntTSL 211.76□□□□□ -0.533e-7■■□□□ 11.4
RPS3P23396 IPO4-207ENST00000558780 3540 ntTSL 211.54□□□□□ -0.563e-7■■□□□ 11.4
RPS3P23396 IPO4-214ENST00000560798 3581 ntTSL 211.53□□□□□ -0.563e-7■■□□□ 11.4
RPS3P23396 IPO4-203ENST00000558046 3440 ntTSL 211.49□□□□□ -0.573e-7■■□□□ 11.4
RPS3P23396 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.583e-7■■□□□ 11.4
RPS3P23396 IPO4-211ENST00000560155 3485 ntTSL 1 (best)11.43□□□□□ -0.583e-7■■□□□ 11.4
RPS3P23396 IPO4-217ENST00000561090 3632 ntTSL 210.89□□□□□ -0.673e-7■■□□□ 11.4
RPS3P23396 IPO4-209ENST00000559588 3537 ntTSL 1 (best)10.76□□□□□ -0.693e-7■■□□□ 11.4
RPS3P23396 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.733e-7■■□□□ 11.4
RPS3P23396 CCND1-205ENST00000542367 476 ntTSL 1 (best)15.85■□□□□ 0.131e-6■■□□□ 11.4
RPS3P23396 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.417e-12■■□□□ 11.4
RPS3P23396 ARHGDIA-214ENST00000583791 351 ntTSL 219.93■□□□□ 0.787e-12■■□□□ 11.4
RPS3P23396 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.557e-12■■□□□ 11.4
RPS3P23396 ARHGDIA-205ENST00000579121 637 ntTSL 315.36■□□□□ 0.057e-12■■□□□ 11.4
RPS3P23396 RELN-206ENST00000473945 688 ntTSL 38.6□□□□□ -1.031e-8■■□□□ 11.4
RPS3P23396 PSMD4-203ENST00000427779 649 ntTSL 316.06■□□□□ 0.161e-6■■□□□ 11.4
RPS3P23396 SNRNP200-206ENST00000484372 581 ntTSL 211.49□□□□□ -0.573e-9■■□□□ 11.4
RPS3P23396 SND1-210ENST00000483503 603 ntTSL 511.87□□□□□ -0.518e-8■■□□□ 11.4
RPS3P23396 SND1-215ENST00000492772 549 ntTSL 410.42□□□□□ -0.748e-8■■□□□ 11.4
RPS3P23396 PRKCSH-202ENST00000585540 501 ntTSL 313.55□□□□□ -0.245e-18■■□□□ 11.4
RPS3P23396 NDRG1-227ENST00000523892 562 ntTSL 48.4□□□□□ -1.061e-8■■□□□ 11.4
RPS3P23396 DCBLD2-202ENST00000326857 3959 ntTSL 1 (best) BASIC11.69□□□□□ -0.549e-16■■□□□ 11.4
RPS3P23396 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.044e-9■■□□□ 11.4
RPS3P23396 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.114e-9■■□□□ 11.4
RPS3P23396 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.134e-9■■□□□ 11.4
RPS3P23396 OAZ1-203ENST00000586054 2832 nt20.64■□□□□ 0.892e-18■■□□□ 11.4
RPS3P23396 OAZ1-208ENST00000592727 726 ntTSL 214.71□□□□□ -0.052e-18■■□□□ 11.4
RPS3P23396 SNRNP70-207ENST00000598984 547 ntTSL 518.12■□□□□ 0.494e-7■■□□□ 11.4
RPS3P23396 SNRNP70-210ENST00000601411 377 ntTSL 59.82□□□□□ -0.844e-7■■□□□ 11.4
RPS3P23396 SNRNP70-208ENST00000599687 563 ntTSL 28.39□□□□□ -1.074e-7■■□□□ 11.4
RPS3P23396 CLU-205ENST00000519742 583 ntTSL 317.96■□□□□ 0.477e-13■■□□□ 11.4
RPS3P23396 CLU-206ENST00000520491 580 ntTSL 315.33■□□□□ 0.047e-13■■□□□ 11.4
RPS3P23396 KIF22-210ENST00000570173 562 ntTSL 511.51□□□□□ -0.575e-6■■□□□ 11.4
RPS3P23396 IGF2BP1-205ENST00000510023 754 ntTSL 315.47■□□□□ 0.077e-8■■□□□ 11.4
RPS3P23396 ERGIC3-218ENST00000489071 582 ntTSL 28.45□□□□□ -1.061e-24■■□□□ 11.4
RPS3P23396 SAE1-211ENST00000600753 483 ntTSL 419.99■□□□□ 0.791e-7■■□□□ 11.4
RPS3P23396 SAE1-208ENST00000597808 570 ntTSL 217.43■□□□□ 0.381e-7■■□□□ 11.4
RPS3P23396 SAE1-205ENST00000594144 723 ntTSL 314.01□□□□□ -0.171e-7■■□□□ 11.4
RPS3P23396 SAE1-206ENST00000594526 709 ntTSL 313.37□□□□□ -0.271e-7■■□□□ 11.4
RPS3P23396 SAE1-210ENST00000600706 744 ntTSL 59.45□□□□□ -0.91e-7■■□□□ 11.4
RPS3P23396 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC11.26□□□□□ -0.613e-16■■□□□ 11.4
RPS3P23396 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.571e-11■■□□□ 11.4
RPS3P23396 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.451e-11■■□□□ 11.4
RPS3P23396 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.11e-11■■□□□ 11.4
RPS3P23396 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.041e-11■■□□□ 11.4
RPS3P23396 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.47□□□□□ -0.251e-46■■□□□ 11.4
RPS3P23396 RPL18-216ENST00000552851 691 ntTSL 511.44□□□□□ -0.581e-8■■□□□ 11.4
RPS3P23396 RFC4-203ENST00000411792 560 ntTSL 517.78■□□□□ 0.443e-9■■□□□ 11.4
RPS3P23396 ARHGDIA-209ENST00000582309 628 ntTSL 216.94■□□□□ 0.33e-9■■□□□ 11.4
RPS3P23396 EWSR1-213ENST00000447973 582 ntTSL 413.04□□□□□ -0.323e-9■■□□□ 11.4
RPS3P23396 EWSR1-210ENST00000436425 553 ntTSL 412.8□□□□□ -0.363e-9■■□□□ 11.4
RPS3P23396 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.453e-9■■□□□ 11.4
RPS3P23396 RFC4-206ENST00000427785 485 ntTSL 311.95□□□□□ -0.53e-9■■□□□ 11.4
RPS3P23396 RFC4-208ENST00000447345 785 ntTSL 211.63□□□□□ -0.553e-9■■□□□ 11.4
RPS3P23396 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.573e-9■■□□□ 11.4
RPS3P23396 RFC4-214ENST00000494047 1393 ntTSL 211.37□□□□□ -0.593e-9■■□□□ 11.4
RPS3P23396 SEM1-205ENST00000444799 1590 ntTSL 2 BASIC10.52□□□□□ -0.733e-9■■□□□ 11.4
RPS3P23396 SEM1-204ENST00000417009 350 ntTSL 3 BASIC10.14□□□□□ -0.793e-9■■□□□ 11.4
RPS3P23396 RFC4-201ENST00000296273 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.813e-9■■□□□ 11.4
RPS3P23396 SEM1-206ENST00000449279 699 ntTSL 39.7□□□□□ -0.863e-9■■□□□ 11.4
RPS3P23396 RFC4-210ENST00000449502 799 ntTSL 39.61□□□□□ -0.873e-9■■□□□ 11.4
RPS3P23396 SEM1-210ENST00000488005 775 ntTSL 2 BASIC9.34□□□□□ -0.913e-9■■□□□ 11.4
RPS3P23396 RFC4-207ENST00000433496 1111 ntTSL 5 BASIC9.3□□□□□ -0.923e-9■■□□□ 11.4
RPS3P23396 SEM1-223ENST00000623498 582 ntTSL 5 BASIC8.84□□□□□ -0.993e-9■■□□□ 11.4
RPS3P23396 SEM1-214ENST00000613919 610 ntTSL 28.76□□□□□ -1.013e-9■■□□□ 11.4
RPS3P23396 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC8.55□□□□□ -1.043e-9■■□□□ 11.4
RPS3P23396 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.52□□□□□ -1.053e-9■■□□□ 11.4
RPS3P23396 SEM1-207ENST00000466986 507 ntTSL 27.52□□□□□ -1.213e-9■■□□□ 11.4
RPS3P23396 RFC4-209ENST00000448497 453 ntTSL 56.89□□□□□ -1.313e-9■■□□□ 11.4
RPS3P23396 SEM1-219ENST00000618105 544 ntTSL 24.43□□□□□ -1.73e-9■■□□□ 11.4
RPS3P23396 SEM1-220ENST00000619259 462 ntTSL 24.18□□□□□ -1.743e-9■■□□□ 11.4
RPS3P23396 SEM1-217ENST00000617133 591 ntTSL 24.18□□□□□ -1.743e-9■■□□□ 11.4
RPS3P23396 EWSR1-209ENST00000415761 587 ntTSL 33.07□□□□□ -1.923e-9■■□□□ 11.4
RPS3P23396 RFC4-205ENST00000418288 701 ntTSL 22.89□□□□□ -1.953e-9■■□□□ 11.4
RPS3P23396 SEM1-209ENST00000482389 2773 ntTSL 20.27□□□□□ -2.373e-9■■□□□ 11.4
RPS3P23396 RAB5C-209ENST00000552162 551 ntTSL 415.44■□□□□ 0.068e-7■■□□□ 11.4
RPS3P23396 RAB5C-205ENST00000550013 555 ntTSL 214.65□□□□□ -0.068e-7■■□□□ 11.4
RPS3P23396 RAB5C-206ENST00000550406 500 ntTSL 312.84□□□□□ -0.358e-7■■□□□ 11.4
RPS3P23396 RAB5C-203ENST00000546881 608 ntTSL 210.91□□□□□ -0.668e-7■■□□□ 11.4
RPS3P23396 RAB5C-207ENST00000550504 583 ntTSL 310.16□□□□□ -0.788e-7■■□□□ 11.4
RPS3P23396 FLNB-209ENST00000477629 2058 ntTSL 213.06□□□□□ -0.324e-14■■□□□ 11.4
RPS3P23396 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.469e-7■■□□□ 11.4
RPS3P23396 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.439e-7■■□□□ 11.4
RPS3P23396 PSMD11-210ENST00000584340 559 ntTSL 410.56□□□□□ -0.729e-7■■□□□ 11.4
RPS3P23396 PTPRF-215ENST00000496447 5887 ntTSL 1 (best)12.54□□□□□ -0.48e-7■■□□□ 11.4
RPS3P23396 PTPRF-203ENST00000372407 4600 ntTSL 210.97□□□□□ -0.658e-7■■□□□ 11.4
RPS3P23396 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.01□□□□□ -0.333e-16■□□□□ 11.3
RPS3P23396 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.373e-16■□□□□ 11.3
Retrieved 100 of 24,271 protein–RNA pairs in 557.6 ms