RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
SNRNP70-208ENST00000599687 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
SNRNP70-208ENST00000599687 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
SNRNP70-208ENST00000599687 PHF23Q9BUL5 403 aaPredicted RBP26.46■■□□□ 1.83
SNRNP70-208ENST00000599687 FOXD1Q16676 465 aa25.09■■□□□ 1.61
SNRNP70-208ENST00000599687 POTEDQ86YR6 584 aa24.18■■□□□ 1.46
SNRNP70-208ENST00000599687 MSH5O43196 834 aa23.89■■□□□ 1.41
SNRNP70-208ENST00000599687 PIAS4Q8N2W9 510 aaPredicted RBP23.41■■□□□ 1.34
SNRNP70-208ENST00000599687 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
SNRNP70-208ENST00000599687 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
SNRNP70-208ENST00000599687 ADRA2BP18089 450 aa22.87■■□□□ 1.25
SNRNP70-208ENST00000599687 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
SNRNP70-208ENST00000599687 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
SNRNP70-208ENST00000599687 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
SNRNP70-208ENST00000599687 MAPK8IP2Q13387 824 aaPredicted RBP21.15■□□□□ 0.98
SNRNP70-208ENST00000599687 CACNB1Q02641 598 aaPredicted RBP20.85■□□□□ 0.93
SNRNP70-208ENST00000599687 DCAF8L1A6NGE4 600 aa20.52■□□□□ 0.88
SNRNP70-208ENST00000599687 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
SNRNP70-208ENST00000599687 HOXD11P31277 338 aaPredicted RBP20.2■□□□□ 0.82
SNRNP70-208ENST00000599687 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
SNRNP70-208ENST00000599687 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
SNRNP70-208ENST00000599687 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
SNRNP70-208ENST00000599687 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
SNRNP70-208ENST00000599687 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
SNRNP70-208ENST00000599687 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
SNRNP70-208ENST00000599687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.696e-8■■□□□ 11.8
SNRNP70-208ENST00000599687 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
SNRNP70-208ENST00000599687 KCNA4P22459 653 aa19.04■□□□□ 0.64
SNRNP70-208ENST00000599687 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
SNRNP70-208ENST00000599687 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
SNRNP70-208ENST00000599687 POTEHQ6S545 545 aa18.89■□□□□ 0.61
SNRNP70-208ENST00000599687 ABCC9O60706 1549 aa18.8■□□□□ 0.6
SNRNP70-208ENST00000599687 CAPN15O75808 1086 aa18.79■□□□□ 0.6
SNRNP70-208ENST00000599687 U3KPZ7 1027 aaPredicted RBP18.76■□□□□ 0.59
SNRNP70-208ENST00000599687 DSG3P32926 999 aa18.71■□□□□ 0.59
SNRNP70-208ENST00000599687 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
SNRNP70-208ENST00000599687 APLP2Q06481 763 aa18.47■□□□□ 0.55
SNRNP70-208ENST00000599687 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
SNRNP70-208ENST00000599687 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
SNRNP70-208ENST00000599687 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
SNRNP70-208ENST00000599687 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
SNRNP70-208ENST00000599687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
SNRNP70-208ENST00000599687 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
SNRNP70-208ENST00000599687 ABCB7O75027 752 aa18.22■□□□□ 0.51
SNRNP70-208ENST00000599687 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
SNRNP70-208ENST00000599687 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
SNRNP70-208ENST00000599687 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
SNRNP70-208ENST00000599687 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
SNRNP70-208ENST00000599687 NACADO15069 1562 aa17.95■□□□□ 0.46
SNRNP70-208ENST00000599687 DCAF8L2P0C7V8 631 aa17.92■□□□□ 0.46
SNRNP70-208ENST00000599687 CHRDL2Q6WN34 429 aa17.79■□□□□ 0.44
SNRNP70-208ENST00000599687 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
SNRNP70-208ENST00000599687 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
SNRNP70-208ENST00000599687 POLA2Q14181 598 aa17.67■□□□□ 0.42
SNRNP70-208ENST00000599687 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
SNRNP70-208ENST00000599687 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
SNRNP70-208ENST00000599687 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
SNRNP70-208ENST00000599687 ZBTB22O15209 634 aa17.59■□□□□ 0.41
SNRNP70-208ENST00000599687 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNRNP70-208ENST00000599687 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
SNRNP70-208ENST00000599687 SP7Q8TDD2 431 aaPredicted RBP17.45■□□□□ 0.38
SNRNP70-208ENST00000599687 AKT1S1Q96B36 256 aa17.43■□□□□ 0.38
SNRNP70-208ENST00000599687 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
SNRNP70-208ENST00000599687 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
SNRNP70-208ENST00000599687 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
SNRNP70-208ENST00000599687 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
SNRNP70-208ENST00000599687 REM2Q8IYK8 340 aaPredicted RBP17.22■□□□□ 0.35
SNRNP70-208ENST00000599687 PIP4P2Q8N4L2 257 aa17.19■□□□□ 0.34
SNRNP70-208ENST00000599687 HAX1O00165 279 aa17.14■□□□□ 0.33
SNRNP70-208ENST00000599687 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SNRNP70-208ENST00000599687 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
SNRNP70-208ENST00000599687 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
SNRNP70-208ENST00000599687 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
SNRNP70-208ENST00000599687 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
SNRNP70-208ENST00000599687 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
SNRNP70-208ENST00000599687 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
SNRNP70-208ENST00000599687 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNRNP70-208ENST00000599687 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
SNRNP70-208ENST00000599687 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
SNRNP70-208ENST00000599687 SPDYE2BA6NHP3 402 aa16.73■□□□□ 0.27
SNRNP70-208ENST00000599687 SPDYE6P0CI01 402 aa16.73■□□□□ 0.27
SNRNP70-208ENST00000599687 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
SNRNP70-208ENST00000599687 FBLN2P98095 1184 aa16.71■□□□□ 0.27
SNRNP70-208ENST00000599687 ATXN8OSP0DMR3 200 aa16.66■□□□□ 0.26
SNRNP70-208ENST00000599687 EVX2Q03828 476 aa16.66■□□□□ 0.26
SNRNP70-208ENST00000599687 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
SNRNP70-208ENST00000599687 SPDYE1Q8NFV5 336 aaPredicted RBP16.62■□□□□ 0.25
SNRNP70-208ENST00000599687 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
SNRNP70-208ENST00000599687 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
SNRNP70-208ENST00000599687 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
SNRNP70-208ENST00000599687 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
SNRNP70-208ENST00000599687 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
SNRNP70-208ENST00000599687 FKBP8Q14318 412 aa16.52■□□□□ 0.24
SNRNP70-208ENST00000599687 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
SNRNP70-208ENST00000599687 C19orf67A6NJJ6 358 aa16.46■□□□□ 0.23
SNRNP70-208ENST00000599687 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
SNRNP70-208ENST00000599687 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-208ENST00000599687 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
SNRNP70-208ENST00000599687 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
SNRNP70-208ENST00000599687 BAZ1BQ9UIG0 1483 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms