RNA–Protein interactions for RNA: ENST00000449279.5

SEM1-206, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-206ENST00000449279 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
SEM1-206ENST00000449279 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
SEM1-206ENST00000449279 ABCC9O60706 1549 aa20.23■□□□□ 0.83
SEM1-206ENST00000449279 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
SEM1-206ENST00000449279 NACADO15069 1562 aa19.58■□□□□ 0.73
SEM1-206ENST00000449279 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
SEM1-206ENST00000449279 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
SEM1-206ENST00000449279 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
SEM1-206ENST00000449279 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
SEM1-206ENST00000449279 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
SEM1-206ENST00000449279 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
SEM1-206ENST00000449279 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
SEM1-206ENST00000449279 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
SEM1-206ENST00000449279 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
SEM1-206ENST00000449279 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
SEM1-206ENST00000449279 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
SEM1-206ENST00000449279 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
SEM1-206ENST00000449279 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
SEM1-206ENST00000449279 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
SEM1-206ENST00000449279 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
SEM1-206ENST00000449279 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
SEM1-206ENST00000449279 WIZO95785 1651 aa18.24■□□□□ 0.51
SEM1-206ENST00000449279 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
SEM1-206ENST00000449279 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
SEM1-206ENST00000449279 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
SEM1-206ENST00000449279 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
SEM1-206ENST00000449279 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
SEM1-206ENST00000449279 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
SEM1-206ENST00000449279 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
SEM1-206ENST00000449279 TOP2AP11388 1531 aaKnown RBP17.94■□□□□ 0.46
SEM1-206ENST00000449279 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
SEM1-206ENST00000449279 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
SEM1-206ENST00000449279 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
SEM1-206ENST00000449279 NESP48681 1621 aa17.65■□□□□ 0.42
SEM1-206ENST00000449279 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
SEM1-206ENST00000449279 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
SEM1-206ENST00000449279 CFTRP13569 1480 aa17.5■□□□□ 0.39
SEM1-206ENST00000449279 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
SEM1-206ENST00000449279 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
SEM1-206ENST00000449279 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
SEM1-206ENST00000449279 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
SEM1-206ENST00000449279 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
SEM1-206ENST00000449279 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
SEM1-206ENST00000449279 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
SEM1-206ENST00000449279 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
SEM1-206ENST00000449279 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
SEM1-206ENST00000449279 WDR62O43379 1518 aa17.21■□□□□ 0.34
SEM1-206ENST00000449279 CUX1P39880 1505 aa17.18■□□□□ 0.34
SEM1-206ENST00000449279 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
SEM1-206ENST00000449279 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
SEM1-206ENST00000449279 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
SEM1-206ENST00000449279 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
SEM1-206ENST00000449279 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
SEM1-206ENST00000449279 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
SEM1-206ENST00000449279 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
SEM1-206ENST00000449279 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
SEM1-206ENST00000449279 CUX2O14529 1486 aa17.02■□□□□ 0.32
SEM1-206ENST00000449279 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
SEM1-206ENST00000449279 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
SEM1-206ENST00000449279 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
SEM1-206ENST00000449279 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
SEM1-206ENST00000449279 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
SEM1-206ENST00000449279 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
SEM1-206ENST00000449279 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
SEM1-206ENST00000449279 SOGA1O94964 1423 aa16.87■□□□□ 0.29
SEM1-206ENST00000449279 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
SEM1-206ENST00000449279 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
SEM1-206ENST00000449279 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
SEM1-206ENST00000449279 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
SEM1-206ENST00000449279 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
SEM1-206ENST00000449279 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
SEM1-206ENST00000449279 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
SEM1-206ENST00000449279 CHD1O14646 1710 aa16.73■□□□□ 0.27
SEM1-206ENST00000449279 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
SEM1-206ENST00000449279 ADAMTS12P58397 1594 aa16.67■□□□□ 0.26
SEM1-206ENST00000449279 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
SEM1-206ENST00000449279 SNAPC4Q5SXM2 1469 aa16.66■□□□□ 0.26
SEM1-206ENST00000449279 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
SEM1-206ENST00000449279 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
SEM1-206ENST00000449279 CUL7Q14999 1698 aa16.63■□□□□ 0.25
SEM1-206ENST00000449279 MAGI1Q96QZ7 1491 aaPredicted RBP16.59■□□□□ 0.25
SEM1-206ENST00000449279 IGF1RP08069 1367 aa16.55■□□□□ 0.24
SEM1-206ENST00000449279 FAM9AQ8IZU1 332 aaPredicted RBP16.55■□□□□ 0.24
SEM1-206ENST00000449279 SYNJ2O15056 1496 aa16.53■□□□□ 0.24
SEM1-206ENST00000449279 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
SEM1-206ENST00000449279 EEA1Q15075 1411 aa16.5■□□□□ 0.23
SEM1-206ENST00000449279 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
SEM1-206ENST00000449279 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
SEM1-206ENST00000449279 KIF21BO75037 1637 aa16.48■□□□□ 0.23
SEM1-206ENST00000449279 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
SEM1-206ENST00000449279 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
SEM1-206ENST00000449279 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
SEM1-206ENST00000449279 FBLN2P98095 1184 aa16.44■□□□□ 0.22
SEM1-206ENST00000449279 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
SEM1-206ENST00000449279 CSRNP3Q8WYN3 585 aa16.43■□□□□ 0.22
SEM1-206ENST00000449279 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
SEM1-206ENST00000449279 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
SEM1-206ENST00000449279 NUP160Q12769 1436 aa16.37■□□□□ 0.21
SEM1-206ENST00000449279 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
SEM1-206ENST00000449279 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms