RNA–Protein interactions for RNA: ENST00000523892.5

NDRG1-227, Transcript of N-myc downstream regulated 1, humanhuman

TSL 4

Gene NDRG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-227ENST00000523892 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
NDRG1-227ENST00000523892 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
NDRG1-227ENST00000523892 ABCC9O60706 1549 aa19.88■□□□□ 0.77
NDRG1-227ENST00000523892 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
NDRG1-227ENST00000523892 NACADO15069 1562 aa18.8■□□□□ 0.6
NDRG1-227ENST00000523892 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
NDRG1-227ENST00000523892 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
NDRG1-227ENST00000523892 DCAF8L2P0C7V8 631 aa18.61■□□□□ 0.57
NDRG1-227ENST00000523892 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.56
NDRG1-227ENST00000523892 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
NDRG1-227ENST00000523892 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
NDRG1-227ENST00000523892 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
NDRG1-227ENST00000523892 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
NDRG1-227ENST00000523892 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
NDRG1-227ENST00000523892 SHROOM4Q9ULL8 1493 aa18.08■□□□□ 0.49
NDRG1-227ENST00000523892 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
NDRG1-227ENST00000523892 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
NDRG1-227ENST00000523892 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
NDRG1-227ENST00000523892 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
NDRG1-227ENST00000523892 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
NDRG1-227ENST00000523892 ATAD2BQ9ULI0 1458 aa17.35■□□□□ 0.37
NDRG1-227ENST00000523892 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
NDRG1-227ENST00000523892 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
NDRG1-227ENST00000523892 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
NDRG1-227ENST00000523892 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
NDRG1-227ENST00000523892 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
NDRG1-227ENST00000523892 NESP48681 1621 aa17.15■□□□□ 0.34
NDRG1-227ENST00000523892 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
NDRG1-227ENST00000523892 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
NDRG1-227ENST00000523892 CUX2O14529 1486 aa17.04■□□□□ 0.32
NDRG1-227ENST00000523892 WIZO95785 1651 aa17.01■□□□□ 0.31
NDRG1-227ENST00000523892 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
NDRG1-227ENST00000523892 THOC2Q8NI27 1593 aaKnown RBP16.97■□□□□ 0.31
NDRG1-227ENST00000523892 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
NDRG1-227ENST00000523892 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
NDRG1-227ENST00000523892 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
NDRG1-227ENST00000523892 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
NDRG1-227ENST00000523892 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
NDRG1-227ENST00000523892 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
NDRG1-227ENST00000523892 WDR62O43379 1518 aa16.7■□□□□ 0.26
NDRG1-227ENST00000523892 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
NDRG1-227ENST00000523892 CFTRP13569 1480 aa16.68■□□□□ 0.26
NDRG1-227ENST00000523892 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
NDRG1-227ENST00000523892 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
NDRG1-227ENST00000523892 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
NDRG1-227ENST00000523892 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
NDRG1-227ENST00000523892 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
NDRG1-227ENST00000523892 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
NDRG1-227ENST00000523892 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
NDRG1-227ENST00000523892 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
NDRG1-227ENST00000523892 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
NDRG1-227ENST00000523892 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
NDRG1-227ENST00000523892 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
NDRG1-227ENST00000523892 ABCC8Q09428 1581 aa16.22■□□□□ 0.19
NDRG1-227ENST00000523892 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
NDRG1-227ENST00000523892 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
NDRG1-227ENST00000523892 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
NDRG1-227ENST00000523892 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.183e-15■■■■■ 31.8
NDRG1-227ENST00000523892 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
NDRG1-227ENST00000523892 CHD1O14646 1710 aa16.15■□□□□ 0.18
NDRG1-227ENST00000523892 CUX1P39880 1505 aa16.14■□□□□ 0.18
NDRG1-227ENST00000523892 RIMBP3CA6NJZ7 1639 aa16.14■□□□□ 0.17
NDRG1-227ENST00000523892 RIMBP3BA6NNM3 1639 aa16.14■□□□□ 0.17
NDRG1-227ENST00000523892 RIMBP3Q9UFD9 1639 aa16.14■□□□□ 0.17
NDRG1-227ENST00000523892 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
NDRG1-227ENST00000523892 ARHGEF11O15085 1522 aa16.08■□□□□ 0.16
NDRG1-227ENST00000523892 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
NDRG1-227ENST00000523892 SOGA1O94964 1423 aa16.07■□□□□ 0.16
NDRG1-227ENST00000523892 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
NDRG1-227ENST00000523892 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
NDRG1-227ENST00000523892 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
NDRG1-227ENST00000523892 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
NDRG1-227ENST00000523892 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
NDRG1-227ENST00000523892 ARAP1Q96P48 1450 aa15.95■□□□□ 0.14
NDRG1-227ENST00000523892 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
NDRG1-227ENST00000523892 FBLN2P98095 1184 aa15.93■□□□□ 0.14
NDRG1-227ENST00000523892 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
NDRG1-227ENST00000523892 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
NDRG1-227ENST00000523892 ABCA10Q8WWZ4 1543 aa15.92■□□□□ 0.14
NDRG1-227ENST00000523892 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
NDRG1-227ENST00000523892 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
NDRG1-227ENST00000523892 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
NDRG1-227ENST00000523892 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
NDRG1-227ENST00000523892 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
NDRG1-227ENST00000523892 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
NDRG1-227ENST00000523892 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
NDRG1-227ENST00000523892 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
NDRG1-227ENST00000523892 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
NDRG1-227ENST00000523892 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
NDRG1-227ENST00000523892 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
NDRG1-227ENST00000523892 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
NDRG1-227ENST00000523892 NUP160Q12769 1436 aa15.72■□□□□ 0.11
NDRG1-227ENST00000523892 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
NDRG1-227ENST00000523892 SHROOM2Q13796 1616 aa15.69■□□□□ 0.1
NDRG1-227ENST00000523892 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
NDRG1-227ENST00000523892 RUSC2Q8N2Y8 1516 aa15.59■□□□□ 0.09
NDRG1-227ENST00000523892 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
NDRG1-227ENST00000523892 IGF1RP08069 1367 aa15.53■□□□□ 0.08
NDRG1-227ENST00000523892 PRG4Q92954 1404 aaPredicted RBP15.52■□□□□ 0.08
NDRG1-227ENST00000523892 CUL7Q14999 1698 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms