RNA–Protein interactions for RNA: ENST00000436425.5

EWSR1-210, Transcript of EWS RNA binding protein 1, humanhuman

TSL 4

Gene EWSR1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-210ENST00000436425 NISCHQ9Y2I1 1504 aa32.17■■■□□ 2.74
EWSR1-210ENST00000436425 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
EWSR1-210ENST00000436425 ABCC9O60706 1549 aa28.28■■■□□ 2.12
EWSR1-210ENST00000436425 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
EWSR1-210ENST00000436425 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
EWSR1-210ENST00000436425 NACADO15069 1562 aa26.85■■□□□ 1.89
EWSR1-210ENST00000436425 ZCCHC6Q5VYS8 1495 aaKnown RBP26.71■■□□□ 1.87
EWSR1-210ENST00000436425 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
EWSR1-210ENST00000436425 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
EWSR1-210ENST00000436425 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.82
EWSR1-210ENST00000436425 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
EWSR1-210ENST00000436425 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
EWSR1-210ENST00000436425 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
EWSR1-210ENST00000436425 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
EWSR1-210ENST00000436425 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
EWSR1-210ENST00000436425 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
EWSR1-210ENST00000436425 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
EWSR1-210ENST00000436425 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
EWSR1-210ENST00000436425 SMARCA4P51532 1647 aa24.96■■□□□ 1.59
EWSR1-210ENST00000436425 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
EWSR1-210ENST00000436425 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
EWSR1-210ENST00000436425 BAZ1AQ9NRL2 1556 aaPredicted RBP24.85■■□□□ 1.57
EWSR1-210ENST00000436425 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
EWSR1-210ENST00000436425 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
EWSR1-210ENST00000436425 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
EWSR1-210ENST00000436425 WIZO95785 1651 aa24.62■■□□□ 1.53
EWSR1-210ENST00000436425 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
EWSR1-210ENST00000436425 PEG3Q9GZU2 1588 aa24.61■■□□□ 1.53
EWSR1-210ENST00000436425 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
EWSR1-210ENST00000436425 NESP48681 1621 aa24.48■■□□□ 1.51
EWSR1-210ENST00000436425 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
EWSR1-210ENST00000436425 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
EWSR1-210ENST00000436425 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
EWSR1-210ENST00000436425 LAMC3Q9Y6N6 1575 aa24.14■■□□□ 1.45
EWSR1-210ENST00000436425 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
EWSR1-210ENST00000436425 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
EWSR1-210ENST00000436425 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
EWSR1-210ENST00000436425 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
EWSR1-210ENST00000436425 CFTRP13569 1480 aa23.96■■□□□ 1.43
EWSR1-210ENST00000436425 CUX2O14529 1486 aa23.94■■□□□ 1.42
EWSR1-210ENST00000436425 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
EWSR1-210ENST00000436425 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
EWSR1-210ENST00000436425 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
EWSR1-210ENST00000436425 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
EWSR1-210ENST00000436425 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
EWSR1-210ENST00000436425 WDR62O43379 1518 aa23.69■■□□□ 1.38
EWSR1-210ENST00000436425 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
EWSR1-210ENST00000436425 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
EWSR1-210ENST00000436425 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
EWSR1-210ENST00000436425 DNMBPQ6XZF7 1577 aa23.39■■□□□ 1.33
EWSR1-210ENST00000436425 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
EWSR1-210ENST00000436425 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
EWSR1-210ENST00000436425 CUX1P39880 1505 aa23.33■■□□□ 1.32
EWSR1-210ENST00000436425 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
EWSR1-210ENST00000436425 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
EWSR1-210ENST00000436425 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
EWSR1-210ENST00000436425 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.322e-7■■■■□ 21.3
EWSR1-210ENST00000436425 SOGA1O94964 1423 aa23.25■■□□□ 1.31
EWSR1-210ENST00000436425 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
EWSR1-210ENST00000436425 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
EWSR1-210ENST00000436425 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
EWSR1-210ENST00000436425 OSCARQ8IYS5 282 aa23.14■■□□□ 1.29
EWSR1-210ENST00000436425 EIF4G3O43432 1585 aaKnown RBP23.13■■□□□ 1.29
EWSR1-210ENST00000436425 FBLN2P98095 1184 aa23.09■■□□□ 1.29
EWSR1-210ENST00000436425 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
EWSR1-210ENST00000436425 SYNJ1O43426 1573 aa23.07■■□□□ 1.28
EWSR1-210ENST00000436425 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
EWSR1-210ENST00000436425 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
EWSR1-210ENST00000436425 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
EWSR1-210ENST00000436425 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
EWSR1-210ENST00000436425 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
EWSR1-210ENST00000436425 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
EWSR1-210ENST00000436425 CHD1O14646 1710 aa22.92■■□□□ 1.26
EWSR1-210ENST00000436425 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
EWSR1-210ENST00000436425 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
EWSR1-210ENST00000436425 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
EWSR1-210ENST00000436425 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
EWSR1-210ENST00000436425 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
EWSR1-210ENST00000436425 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
EWSR1-210ENST00000436425 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
EWSR1-210ENST00000436425 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
EWSR1-210ENST00000436425 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
EWSR1-210ENST00000436425 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
EWSR1-210ENST00000436425 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
EWSR1-210ENST00000436425 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
EWSR1-210ENST00000436425 IGF1RP08069 1367 aa22.64■■□□□ 1.22
EWSR1-210ENST00000436425 FHAD1B1AJZ9 1412 aa22.63■■□□□ 1.21
EWSR1-210ENST00000436425 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
EWSR1-210ENST00000436425 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
EWSR1-210ENST00000436425 GRIN2AQ12879 1464 aa22.61■■□□□ 1.21
EWSR1-210ENST00000436425 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
EWSR1-210ENST00000436425 KIF27Q86VH2 1401 aa22.59■■□□□ 1.21
EWSR1-210ENST00000436425 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.21
EWSR1-210ENST00000436425 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
EWSR1-210ENST00000436425 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
EWSR1-210ENST00000436425 NUP160Q12769 1436 aa22.51■■□□□ 1.19
EWSR1-210ENST00000436425 CARMIL1Q5VZK9 1371 aa22.48■■□□□ 1.19
EWSR1-210ENST00000436425 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
EWSR1-210ENST00000436425 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
EWSR1-210ENST00000436425 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms