RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 NISCHQ9Y2I1 1504 aa20.89■□□□□ 0.94
ERGIC3-218ENST00000489071 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
ERGIC3-218ENST00000489071 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
ERGIC3-218ENST00000489071 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
ERGIC3-218ENST00000489071 ABCC9O60706 1549 aa18.72■□□□□ 0.59
ERGIC3-218ENST00000489071 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
ERGIC3-218ENST00000489071 NACADO15069 1562 aa17.75■□□□□ 0.43
ERGIC3-218ENST00000489071 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
ERGIC3-218ENST00000489071 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
ERGIC3-218ENST00000489071 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.39
ERGIC3-218ENST00000489071 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
ERGIC3-218ENST00000489071 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
ERGIC3-218ENST00000489071 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
ERGIC3-218ENST00000489071 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
ERGIC3-218ENST00000489071 BICRAQ9NZM4 1560 aa17.3■□□□□ 0.36
ERGIC3-218ENST00000489071 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
ERGIC3-218ENST00000489071 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
ERGIC3-218ENST00000489071 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
ERGIC3-218ENST00000489071 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
ERGIC3-218ENST00000489071 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
ERGIC3-218ENST00000489071 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
ERGIC3-218ENST00000489071 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
ERGIC3-218ENST00000489071 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
ERGIC3-218ENST00000489071 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
ERGIC3-218ENST00000489071 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
ERGIC3-218ENST00000489071 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
ERGIC3-218ENST00000489071 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
ERGIC3-218ENST00000489071 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
ERGIC3-218ENST00000489071 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-218ENST00000489071 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
ERGIC3-218ENST00000489071 CUX2O14529 1486 aa16.17■□□□□ 0.18
ERGIC3-218ENST00000489071 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-218ENST00000489071 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
ERGIC3-218ENST00000489071 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
ERGIC3-218ENST00000489071 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.16
ERGIC3-218ENST00000489071 NESP48681 1621 aa16.07■□□□□ 0.16
ERGIC3-218ENST00000489071 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
ERGIC3-218ENST00000489071 PDS5BQ9NTI5 1447 aa15.93■□□□□ 0.14
ERGIC3-218ENST00000489071 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
ERGIC3-218ENST00000489071 WIZO95785 1651 aa15.89■□□□□ 0.13
ERGIC3-218ENST00000489071 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
ERGIC3-218ENST00000489071 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
ERGIC3-218ENST00000489071 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
ERGIC3-218ENST00000489071 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
ERGIC3-218ENST00000489071 WDR62O43379 1518 aa15.72■□□□□ 0.11
ERGIC3-218ENST00000489071 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.1
ERGIC3-218ENST00000489071 TOP2AP11388 1531 aaKnown RBP15.7■□□□□ 0.1
ERGIC3-218ENST00000489071 CFTRP13569 1480 aa15.69■□□□□ 0.1
ERGIC3-218ENST00000489071 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
ERGIC3-218ENST00000489071 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
ERGIC3-218ENST00000489071 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
ERGIC3-218ENST00000489071 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.07
ERGIC3-218ENST00000489071 FOXD1Q16676 465 aa15.49■□□□□ 0.07
ERGIC3-218ENST00000489071 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
ERGIC3-218ENST00000489071 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
ERGIC3-218ENST00000489071 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
ERGIC3-218ENST00000489071 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
ERGIC3-218ENST00000489071 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
ERGIC3-218ENST00000489071 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
ERGIC3-218ENST00000489071 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
ERGIC3-218ENST00000489071 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
ERGIC3-218ENST00000489071 ADRA2BP18089 450 aa15.25■□□□□ 0.03
ERGIC3-218ENST00000489071 TARBP1Q13395 1621 aaKnown RBP15.24■□□□□ 0.03
ERGIC3-218ENST00000489071 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
ERGIC3-218ENST00000489071 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.03
ERGIC3-218ENST00000489071 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
ERGIC3-218ENST00000489071 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
ERGIC3-218ENST00000489071 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
ERGIC3-218ENST00000489071 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
ERGIC3-218ENST00000489071 SOGA1O94964 1423 aa15.17■□□□□ 0.02
ERGIC3-218ENST00000489071 CHD1O14646 1710 aa15.17■□□□□ 0.02
ERGIC3-218ENST00000489071 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
ERGIC3-218ENST00000489071 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
ERGIC3-218ENST00000489071 FBLN2P98095 1184 aa15.14■□□□□ 0.01
ERGIC3-218ENST00000489071 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
ERGIC3-218ENST00000489071 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
ERGIC3-218ENST00000489071 TDRD9Q8NDG6 1382 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-218ENST00000489071 CUX1P39880 1505 aa15.1■□□□□ 0.01
ERGIC3-218ENST00000489071 SUPT5HO00267 1087 aaKnown RBP15.07■□□□□ 0
ERGIC3-218ENST00000489071 CYB5RLQ6IPT4 315 aa15.07■□□□□ 0
ERGIC3-218ENST00000489071 SNAPC4Q5SXM2 1469 aa15.06■□□□□ 0
ERGIC3-218ENST00000489071 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
ERGIC3-218ENST00000489071 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
ERGIC3-218ENST00000489071 GRIN2BQ13224 1484 aa15.04■□□□□ -0
ERGIC3-218ENST00000489071 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
ERGIC3-218ENST00000489071 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
ERGIC3-218ENST00000489071 SYNJ2O15056 1496 aa14.99□□□□□ -0.01
ERGIC3-218ENST00000489071 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
ERGIC3-218ENST00000489071 PBRM1Q86U86 1689 aa14.98□□□□□ -0.01
ERGIC3-218ENST00000489071 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
ERGIC3-218ENST00000489071 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
ERGIC3-218ENST00000489071 ABCA5Q8WWZ7 1642 aa14.93□□□□□ -0.02
ERGIC3-218ENST00000489071 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
ERGIC3-218ENST00000489071 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
ERGIC3-218ENST00000489071 TOP2BQ02880 1626 aa14.89□□□□□ -0.03
ERGIC3-218ENST00000489071 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
ERGIC3-218ENST00000489071 GRIN2AQ12879 1464 aa14.83□□□□□ -0.03
ERGIC3-218ENST00000489071 ADAMTS12P58397 1594 aa14.82□□□□□ -0.04
ERGIC3-218ENST00000489071 FHAD1B1AJZ9 1412 aa14.81□□□□□ -0.04
ERGIC3-218ENST00000489071 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms