RNA–Protein interactions for RNA: ENST00000473945.1

RELN-206, Transcript of reelin, humanhuman

TSL 3

Gene RELN, Length 688 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELN-206ENST00000473945 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
RELN-206ENST00000473945 ABCC9O60706 1549 aa20.5■□□□□ 0.87
RELN-206ENST00000473945 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
RELN-206ENST00000473945 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
RELN-206ENST00000473945 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
RELN-206ENST00000473945 NACADO15069 1562 aa19.16■□□□□ 0.66
RELN-206ENST00000473945 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
RELN-206ENST00000473945 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
RELN-206ENST00000473945 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
RELN-206ENST00000473945 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
RELN-206ENST00000473945 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
RELN-206ENST00000473945 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
RELN-206ENST00000473945 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.55
RELN-206ENST00000473945 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
RELN-206ENST00000473945 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
RELN-206ENST00000473945 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
RELN-206ENST00000473945 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
RELN-206ENST00000473945 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
RELN-206ENST00000473945 DNAJC5Q9H3Z4 198 aa18.22■□□□□ 0.51
RELN-206ENST00000473945 CUX2O14529 1486 aa17.86■□□□□ 0.45
RELN-206ENST00000473945 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
RELN-206ENST00000473945 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
RELN-206ENST00000473945 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
RELN-206ENST00000473945 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
RELN-206ENST00000473945 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
RELN-206ENST00000473945 NESP48681 1621 aa17.48■□□□□ 0.39
RELN-206ENST00000473945 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
RELN-206ENST00000473945 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
RELN-206ENST00000473945 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
RELN-206ENST00000473945 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
RELN-206ENST00000473945 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
RELN-206ENST00000473945 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
RELN-206ENST00000473945 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
RELN-206ENST00000473945 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
RELN-206ENST00000473945 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
RELN-206ENST00000473945 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
RELN-206ENST00000473945 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
RELN-206ENST00000473945 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
RELN-206ENST00000473945 WDR62O43379 1518 aa17.09■□□□□ 0.33
RELN-206ENST00000473945 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
RELN-206ENST00000473945 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
RELN-206ENST00000473945 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
RELN-206ENST00000473945 WIZO95785 1651 aa16.93■□□□□ 0.3
RELN-206ENST00000473945 CFTRP13569 1480 aa16.83■□□□□ 0.28
RELN-206ENST00000473945 RIMBP3CA6NJZ7 1639 aa16.79■□□□□ 0.28
RELN-206ENST00000473945 RIMBP3BA6NNM3 1639 aa16.79■□□□□ 0.28
RELN-206ENST00000473945 RIMBP3Q9UFD9 1639 aa16.79■□□□□ 0.28
RELN-206ENST00000473945 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
RELN-206ENST00000473945 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
RELN-206ENST00000473945 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
RELN-206ENST00000473945 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
RELN-206ENST00000473945 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
RELN-206ENST00000473945 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
RELN-206ENST00000473945 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
RELN-206ENST00000473945 CYB5RLQ6IPT4 315 aa16.58■□□□□ 0.24
RELN-206ENST00000473945 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
RELN-206ENST00000473945 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
RELN-206ENST00000473945 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
RELN-206ENST00000473945 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
RELN-206ENST00000473945 CHD1O14646 1710 aa16.53■□□□□ 0.24
RELN-206ENST00000473945 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
RELN-206ENST00000473945 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
RELN-206ENST00000473945 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
RELN-206ENST00000473945 FBLN2P98095 1184 aa16.45■□□□□ 0.22
RELN-206ENST00000473945 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
RELN-206ENST00000473945 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.22
RELN-206ENST00000473945 AEBP2Q6ZN18 517 aaPredicted RBP16.38■□□□□ 0.21
RELN-206ENST00000473945 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
RELN-206ENST00000473945 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
RELN-206ENST00000473945 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
RELN-206ENST00000473945 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
RELN-206ENST00000473945 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
RELN-206ENST00000473945 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
RELN-206ENST00000473945 SOGA1O94964 1423 aa16.28■□□□□ 0.2
RELN-206ENST00000473945 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
RELN-206ENST00000473945 CHMP7Q8WUX9 453 aaPredicted RBP16.27■□□□□ 0.2
RELN-206ENST00000473945 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
RELN-206ENST00000473945 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
RELN-206ENST00000473945 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
RELN-206ENST00000473945 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
RELN-206ENST00000473945 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
RELN-206ENST00000473945 PBRM1Q86U86 1689 aa16.14■□□□□ 0.18
RELN-206ENST00000473945 CUX1P39880 1505 aa16.13■□□□□ 0.17
RELN-206ENST00000473945 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
RELN-206ENST00000473945 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
RELN-206ENST00000473945 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
RELN-206ENST00000473945 GRIN2AQ12879 1464 aa15.98■□□□□ 0.15
RELN-206ENST00000473945 CEP170Q5SW79 1584 aa15.97■□□□□ 0.15
RELN-206ENST00000473945 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
RELN-206ENST00000473945 ADAMTS12P58397 1594 aa15.94■□□□□ 0.14
RELN-206ENST00000473945 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
RELN-206ENST00000473945 NUP160Q12769 1436 aa15.93■□□□□ 0.14
RELN-206ENST00000473945 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
RELN-206ENST00000473945 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
RELN-206ENST00000473945 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
RELN-206ENST00000473945 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
RELN-206ENST00000473945 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
RELN-206ENST00000473945 BIVM-ERCC5R4GMW8 1640 aa15.81■□□□□ 0.12
RELN-206ENST00000473945 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
RELN-206ENST00000473945 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms