RNA–Protein interactions for RNA: ENST00000547870.1

HNRNPA1-207, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 3

Gene HNRNPA1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-207ENST00000547870 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
HNRNPA1-207ENST00000547870 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
HNRNPA1-207ENST00000547870 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
HNRNPA1-207ENST00000547870 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
HNRNPA1-207ENST00000547870 FOXD1Q16676 465 aa16.03■□□□□ 0.16
HNRNPA1-207ENST00000547870 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.16
HNRNPA1-207ENST00000547870 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
HNRNPA1-207ENST00000547870 ADRA2BP18089 450 aa15.32■□□□□ 0.04
HNRNPA1-207ENST00000547870 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
HNRNPA1-207ENST00000547870 MSH5O43196 834 aa14.81□□□□□ -0.04
HNRNPA1-207ENST00000547870 NISCHQ9Y2I1 1504 aa14.64□□□□□ -0.07
HNRNPA1-207ENST00000547870 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
HNRNPA1-207ENST00000547870 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
HNRNPA1-207ENST00000547870 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
HNRNPA1-207ENST00000547870 DMRT2Q9Y5R5 561 aa13.78□□□□□ -0.2
HNRNPA1-207ENST00000547870 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
HNRNPA1-207ENST00000547870 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
HNRNPA1-207ENST00000547870 KCNA4P22459 653 aa13.68□□□□□ -0.22
HNRNPA1-207ENST00000547870 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
HNRNPA1-207ENST00000547870 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
HNRNPA1-207ENST00000547870 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
HNRNPA1-207ENST00000547870 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
HNRNPA1-207ENST00000547870 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
HNRNPA1-207ENST00000547870 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
HNRNPA1-207ENST00000547870 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
HNRNPA1-207ENST00000547870 CCDC180Q9P1Z9 1646 aa12.96□□□□□ -0.33
HNRNPA1-207ENST00000547870 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
HNRNPA1-207ENST00000547870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.374e-8■□□□□ 8.9
HNRNPA1-207ENST00000547870 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
HNRNPA1-207ENST00000547870 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
HNRNPA1-207ENST00000547870 ZBTB22O15209 634 aa12.6□□□□□ -0.39
HNRNPA1-207ENST00000547870 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
HNRNPA1-207ENST00000547870 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
HNRNPA1-207ENST00000547870 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
HNRNPA1-207ENST00000547870 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
HNRNPA1-207ENST00000547870 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
HNRNPA1-207ENST00000547870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
HNRNPA1-207ENST00000547870 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
HNRNPA1-207ENST00000547870 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
HNRNPA1-207ENST00000547870 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
HNRNPA1-207ENST00000547870 ABCC9O60706 1549 aa12.36□□□□□ -0.43
HNRNPA1-207ENST00000547870 APLP2Q06481 763 aa12.29□□□□□ -0.44
HNRNPA1-207ENST00000547870 SPINK5Q9NQ38 1064 aaPredicted RBP12.24□□□□□ -0.45
HNRNPA1-207ENST00000547870 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
HNRNPA1-207ENST00000547870 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
HNRNPA1-207ENST00000547870 ZCCHC6Q5VYS8 1495 aaKnown RBP12.22□□□□□ -0.45
HNRNPA1-207ENST00000547870 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.45
HNRNPA1-207ENST00000547870 CAPN15O75808 1086 aa12.16□□□□□ -0.46
HNRNPA1-207ENST00000547870 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
HNRNPA1-207ENST00000547870 NACADO15069 1562 aa12.16□□□□□ -0.46
HNRNPA1-207ENST00000547870 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
HNRNPA1-207ENST00000547870 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
HNRNPA1-207ENST00000547870 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
HNRNPA1-207ENST00000547870 DSG3P32926 999 aa12.05□□□□□ -0.48
HNRNPA1-207ENST00000547870 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
HNRNPA1-207ENST00000547870 ABCB7O75027 752 aa11.92□□□□□ -0.5
HNRNPA1-207ENST00000547870 POLA2Q14181 598 aa11.91□□□□□ -0.5
HNRNPA1-207ENST00000547870 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
HNRNPA1-207ENST00000547870 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
HNRNPA1-207ENST00000547870 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
HNRNPA1-207ENST00000547870 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
HNRNPA1-207ENST00000547870 SHROOM4Q9ULL8 1493 aa11.69□□□□□ -0.54
HNRNPA1-207ENST00000547870 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
HNRNPA1-207ENST00000547870 FBLN2P98095 1184 aa11.63□□□□□ -0.55
HNRNPA1-207ENST00000547870 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
HNRNPA1-207ENST00000547870 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
HNRNPA1-207ENST00000547870 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
HNRNPA1-207ENST00000547870 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
HNRNPA1-207ENST00000547870 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
HNRNPA1-207ENST00000547870 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
HNRNPA1-207ENST00000547870 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
HNRNPA1-207ENST00000547870 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
HNRNPA1-207ENST00000547870 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
HNRNPA1-207ENST00000547870 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
HNRNPA1-207ENST00000547870 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
HNRNPA1-207ENST00000547870 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
HNRNPA1-207ENST00000547870 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
HNRNPA1-207ENST00000547870 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
HNRNPA1-207ENST00000547870 PEG3Q9GZU2 1588 aa11.26□□□□□ -0.61
HNRNPA1-207ENST00000547870 CC2D2AQ9P2K1 1620 aa11.24□□□□□ -0.61
HNRNPA1-207ENST00000547870 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
HNRNPA1-207ENST00000547870 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
HNRNPA1-207ENST00000547870 SMARCA2P51531 1590 aa11.22□□□□□ -0.61
HNRNPA1-207ENST00000547870 FKBP8Q14318 412 aa11.22□□□□□ -0.61
HNRNPA1-207ENST00000547870 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
HNRNPA1-207ENST00000547870 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
HNRNPA1-207ENST00000547870 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
HNRNPA1-207ENST00000547870 PROM2Q8N271 834 aa11.2□□□□□ -0.62
HNRNPA1-207ENST00000547870 HMGXB3Q12766 1538 aa11.15□□□□□ -0.62
HNRNPA1-207ENST00000547870 WIZO95785 1651 aa11.11□□□□□ -0.63
HNRNPA1-207ENST00000547870 BAZ1BQ9UIG0 1483 aaKnown RBP11.09□□□□□ -0.63
HNRNPA1-207ENST00000547870 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
HNRNPA1-207ENST00000547870 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
HNRNPA1-207ENST00000547870 TOP2AP11388 1531 aaKnown RBP11.04□□□□□ -0.64
HNRNPA1-207ENST00000547870 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
HNRNPA1-207ENST00000547870 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
HNRNPA1-207ENST00000547870 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
HNRNPA1-207ENST00000547870 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
HNRNPA1-207ENST00000547870 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
HNRNPA1-207ENST00000547870 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms