RNA–Protein interactions for RNA: ENST00000623498.3

SEM1-223, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 5 BASIC

Gene SEM1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-223ENST00000623498 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
SEM1-223ENST00000623498 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
SEM1-223ENST00000623498 ABCC9O60706 1549 aa17.38■□□□□ 0.37
SEM1-223ENST00000623498 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
SEM1-223ENST00000623498 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
SEM1-223ENST00000623498 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
SEM1-223ENST00000623498 MYO15BQ96JP2 1530 aa17.07■□□□□ 0.32
SEM1-223ENST00000623498 NACADO15069 1562 aa17.02■□□□□ 0.32
SEM1-223ENST00000623498 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
SEM1-223ENST00000623498 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
SEM1-223ENST00000623498 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
SEM1-223ENST00000623498 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
SEM1-223ENST00000623498 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
SEM1-223ENST00000623498 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
SEM1-223ENST00000623498 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
SEM1-223ENST00000623498 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEM1-223ENST00000623498 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
SEM1-223ENST00000623498 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
SEM1-223ENST00000623498 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
SEM1-223ENST00000623498 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
SEM1-223ENST00000623498 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
SEM1-223ENST00000623498 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
SEM1-223ENST00000623498 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
SEM1-223ENST00000623498 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
SEM1-223ENST00000623498 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
SEM1-223ENST00000623498 WIZO95785 1651 aa15.79■□□□□ 0.12
SEM1-223ENST00000623498 SMARCA2P51531 1590 aa15.78■□□□□ 0.12
SEM1-223ENST00000623498 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
SEM1-223ENST00000623498 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
SEM1-223ENST00000623498 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
SEM1-223ENST00000623498 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
SEM1-223ENST00000623498 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
SEM1-223ENST00000623498 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
SEM1-223ENST00000623498 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
SEM1-223ENST00000623498 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
SEM1-223ENST00000623498 CUX2O14529 1486 aa15.33■□□□□ 0.05
SEM1-223ENST00000623498 CFTRP13569 1480 aa15.25■□□□□ 0.03
SEM1-223ENST00000623498 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
SEM1-223ENST00000623498 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
SEM1-223ENST00000623498 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
SEM1-223ENST00000623498 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
SEM1-223ENST00000623498 NESP48681 1621 aa15.12■□□□□ 0.01
SEM1-223ENST00000623498 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
SEM1-223ENST00000623498 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
SEM1-223ENST00000623498 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
SEM1-223ENST00000623498 ABCC8Q09428 1581 aa15.02□□□□□ -0.01
SEM1-223ENST00000623498 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
SEM1-223ENST00000623498 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
SEM1-223ENST00000623498 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
SEM1-223ENST00000623498 TOP2BQ02880 1626 aa14.94□□□□□ -0.02
SEM1-223ENST00000623498 BIVM-ERCC5R4GMW8 1640 aa14.94□□□□□ -0.02
SEM1-223ENST00000623498 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
SEM1-223ENST00000623498 CUX1P39880 1505 aa14.92□□□□□ -0.02
SEM1-223ENST00000623498 DNMBPQ6XZF7 1577 aa14.91□□□□□ -0.02
SEM1-223ENST00000623498 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
SEM1-223ENST00000623498 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
SEM1-223ENST00000623498 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
SEM1-223ENST00000623498 WDR62O43379 1518 aa14.82□□□□□ -0.04
SEM1-223ENST00000623498 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
SEM1-223ENST00000623498 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
SEM1-223ENST00000623498 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
SEM1-223ENST00000623498 SOGA1O94964 1423 aa14.74□□□□□ -0.05
SEM1-223ENST00000623498 EEA1Q15075 1411 aa14.73□□□□□ -0.05
SEM1-223ENST00000623498 ABCA10Q8WWZ4 1543 aa14.7□□□□□ -0.06
SEM1-223ENST00000623498 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
SEM1-223ENST00000623498 RAD54L2Q9Y4B4 1467 aa14.69□□□□□ -0.06
SEM1-223ENST00000623498 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
SEM1-223ENST00000623498 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
SEM1-223ENST00000623498 WDR97A6NE52 1622 aa14.67□□□□□ -0.06
SEM1-223ENST00000623498 RUSC2Q8N2Y8 1516 aa14.63□□□□□ -0.07
SEM1-223ENST00000623498 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
SEM1-223ENST00000623498 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
SEM1-223ENST00000623498 ABCA5Q8WWZ7 1642 aa14.59□□□□□ -0.07
SEM1-223ENST00000623498 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
SEM1-223ENST00000623498 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
SEM1-223ENST00000623498 IGF1RP08069 1367 aa14.54□□□□□ -0.08
SEM1-223ENST00000623498 ERICH3Q5RHP9 1530 aa14.54□□□□□ -0.08
SEM1-223ENST00000623498 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
SEM1-223ENST00000623498 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
SEM1-223ENST00000623498 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
SEM1-223ENST00000623498 KIF21BO75037 1637 aa14.52□□□□□ -0.08
SEM1-223ENST00000623498 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.08
SEM1-223ENST00000623498 CUL7Q14999 1698 aa14.52□□□□□ -0.09
SEM1-223ENST00000623498 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
SEM1-223ENST00000623498 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
SEM1-223ENST00000623498 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
SEM1-223ENST00000623498 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
SEM1-223ENST00000623498 GOLGA3Q08378 1498 aa14.46□□□□□ -0.09
SEM1-223ENST00000623498 RAPGEF2Q9Y4G8 1499 aa14.44□□□□□ -0.1
SEM1-223ENST00000623498 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
SEM1-223ENST00000623498 MAGI1Q96QZ7 1491 aaPredicted RBP14.43□□□□□ -0.1
SEM1-223ENST00000623498 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
SEM1-223ENST00000623498 SENP3Q9H4L4 574 aaPredicted RBP14.42□□□□□ -0.1
SEM1-223ENST00000623498 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
SEM1-223ENST00000623498 UBTFP17480 764 aaKnown RBP14.4□□□□□ -0.1
SEM1-223ENST00000623498 SNAPC4Q5SXM2 1469 aa14.39□□□□□ -0.11
SEM1-223ENST00000623498 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
SEM1-223ENST00000623498 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
SEM1-223ENST00000623498 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
SEM1-223ENST00000623498 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms