RNA–Protein interactions for RNA: ENST00000457654.6

PSMD11-202, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PSMD11, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-202ENST00000457654 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
PSMD11-202ENST00000457654 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
PSMD11-202ENST00000457654 ABCC9O60706 1549 aa36.46■■■■□ 3.43
PSMD11-202ENST00000457654 ZCCHC6Q5VYS8 1495 aaKnown RBP36.01■■■■□ 3.35
PSMD11-202ENST00000457654 DCAF1Q9Y4B6 1507 aa35.65■■■■□ 3.3
PSMD11-202ENST00000457654 MYO15BQ96JP2 1530 aa35.55■■■■□ 3.28
PSMD11-202ENST00000457654 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
PSMD11-202ENST00000457654 NACADO15069 1562 aa35.52■■■■□ 3.28
PSMD11-202ENST00000457654 RB1CC1Q8TDY2 1594 aa35.39■■■■□ 3.26
PSMD11-202ENST00000457654 SCRIBQ14160 1630 aa34.69■■■■□ 3.14
PSMD11-202ENST00000457654 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
PSMD11-202ENST00000457654 SHROOM4Q9ULL8 1493 aa34.35■■■■□ 3.09
PSMD11-202ENST00000457654 BICRAQ9NZM4 1560 aa34.33■■■■□ 3.09
PSMD11-202ENST00000457654 PABPN1Q86U42 306 aaKnown RBP eCLIP34.15■■■■□ 3.06
PSMD11-202ENST00000457654 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
PSMD11-202ENST00000457654 EIF4G1Q04637 1599 aaKnown RBP33.36■■■□□ 2.93
PSMD11-202ENST00000457654 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
PSMD11-202ENST00000457654 SMARCA4P51532 1647 aa33.26■■■□□ 2.91
PSMD11-202ENST00000457654 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
PSMD11-202ENST00000457654 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
PSMD11-202ENST00000457654 RSF1Q96T23 1441 aaPredicted RBP33.03■■■□□ 2.88
PSMD11-202ENST00000457654 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
PSMD11-202ENST00000457654 SMARCA2P51531 1590 aa32.88■■■□□ 2.85
PSMD11-202ENST00000457654 ATAD2BQ9ULI0 1458 aa32.88■■■□□ 2.85
PSMD11-202ENST00000457654 WIZO95785 1651 aa32.86■■■□□ 2.85
PSMD11-202ENST00000457654 DNAJC5BQ9UF47 199 aa32.83■■■□□ 2.85
PSMD11-202ENST00000457654 NCAPD3P42695 1498 aa32.75■■■□□ 2.83
PSMD11-202ENST00000457654 HMGXB3Q12766 1538 aa32.7■■■□□ 2.82
PSMD11-202ENST00000457654 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
PSMD11-202ENST00000457654 SUPT5HO00267 1087 aaKnown RBP32.62■■■□□ 2.81
PSMD11-202ENST00000457654 TOP2AP11388 1531 aaKnown RBP32.55■■■□□ 2.8
PSMD11-202ENST00000457654 CCDC88BA6NC98 1476 aa32.14■■■□□ 2.74
PSMD11-202ENST00000457654 CADPSQ9ULU8 1353 aa31.82■■■□□ 2.68
PSMD11-202ENST00000457654 CFTRP13569 1480 aa31.81■■■□□ 2.68
PSMD11-202ENST00000457654 LAMC3Q9Y6N6 1575 aa31.8■■■□□ 2.68
PSMD11-202ENST00000457654 NESP48681 1621 aa31.77■■■□□ 2.68
PSMD11-202ENST00000457654 PRDM2Q13029 1718 aa31.67■■■□□ 2.66
PSMD11-202ENST00000457654 PDS5BQ9NTI5 1447 aa31.53■■■□□ 2.64
PSMD11-202ENST00000457654 FANCD2Q9BXW9 1451 aa31.47■■■□□ 2.63
PSMD11-202ENST00000457654 KIF21AQ7Z4S6 1674 aa31.45■■■□□ 2.63
PSMD11-202ENST00000457654 CEP164Q9UPV0 1460 aa31.37■■■□□ 2.61
PSMD11-202ENST00000457654 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
PSMD11-202ENST00000457654 ABCC8Q09428 1581 aa31.19■■■□□ 2.58
PSMD11-202ENST00000457654 MRC2Q9UBG0 1479 aa31.19■■■□□ 2.58
PSMD11-202ENST00000457654 THOC2Q8NI27 1593 aaKnown RBP31.19■■■□□ 2.58
PSMD11-202ENST00000457654 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.57
PSMD11-202ENST00000457654 WRNQ14191 1432 aaPredicted RBP eCLIP31.11■■■□□ 2.57
PSMD11-202ENST00000457654 WDR62O43379 1518 aa31.09■■■□□ 2.57
PSMD11-202ENST00000457654 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
PSMD11-202ENST00000457654 CUX1P39880 1505 aa31.09■■■□□ 2.57
PSMD11-202ENST00000457654 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
PSMD11-202ENST00000457654 SYNJ1O43426 1573 aa31.04■■■□□ 2.56
PSMD11-202ENST00000457654 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
PSMD11-202ENST00000457654 BIVM-ERCC5R4GMW8 1640 aa31.01■■■□□ 2.55
PSMD11-202ENST00000457654 CHIC1Q5VXU3 224 aa30.87■■■□□ 2.53
PSMD11-202ENST00000457654 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
PSMD11-202ENST00000457654 POLA1P09884 1462 aaPredicted RBP30.85■■■□□ 2.53
PSMD11-202ENST00000457654 CUX2O14529 1486 aa30.81■■■□□ 2.52
PSMD11-202ENST00000457654 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
PSMD11-202ENST00000457654 TARBP1Q13395 1621 aaKnown RBP30.69■■■□□ 2.5
PSMD11-202ENST00000457654 SOGA1O94964 1423 aa30.68■■■□□ 2.5
PSMD11-202ENST00000457654 RAD54L2Q9Y4B4 1467 aa30.68■■■□□ 2.5
PSMD11-202ENST00000457654 IFT140Q96RY7 1462 aa30.68■■■□□ 2.5
PSMD11-202ENST00000457654 WDR97A6NE52 1622 aa30.63■■■□□ 2.49
PSMD11-202ENST00000457654 ABCA10Q8WWZ4 1543 aa30.61■■■□□ 2.49
PSMD11-202ENST00000457654 ZNF608Q9ULD9 1512 aaPredicted RBP30.49■■■□□ 2.47
PSMD11-202ENST00000457654 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.47
PSMD11-202ENST00000457654 EIF4G3O43432 1585 aaKnown RBP30.44■■■□□ 2.46
PSMD11-202ENST00000457654 TDRD9Q8NDG6 1382 aaKnown RBP30.43■■■□□ 2.46
PSMD11-202ENST00000457654 KIF27Q86VH2 1401 aa30.39■■■□□ 2.46
PSMD11-202ENST00000457654 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.462e-6■■■■□ 21.5
PSMD11-202ENST00000457654 GAPVD1Q14C86 1478 aa30.37■■■□□ 2.45
PSMD11-202ENST00000457654 RUSC2Q8N2Y8 1516 aa30.34■■■□□ 2.45
PSMD11-202ENST00000457654 PBRM1Q86U86 1689 aa30.31■■■□□ 2.44
PSMD11-202ENST00000457654 EEA1Q15075 1411 aa30.27■■■□□ 2.44
PSMD11-202ENST00000457654 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
PSMD11-202ENST00000457654 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
PSMD11-202ENST00000457654 IGF1RP08069 1367 aa30.18■■■□□ 2.42
PSMD11-202ENST00000457654 SNAPC4Q5SXM2 1469 aa30.15■■■□□ 2.42
PSMD11-202ENST00000457654 MAGI1Q96QZ7 1491 aaPredicted RBP30.13■■■□□ 2.41
PSMD11-202ENST00000457654 CUL7Q14999 1698 aa30.12■■■□□ 2.41
PSMD11-202ENST00000457654 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
PSMD11-202ENST00000457654 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
PSMD11-202ENST00000457654 CSRNP3Q8WYN3 585 aa30.08■■■□□ 2.41
PSMD11-202ENST00000457654 FHAD1B1AJZ9 1412 aa30.04■■■□□ 2.4
PSMD11-202ENST00000457654 PRXQ9BXM0 1461 aa30.02■■■□□ 2.4
PSMD11-202ENST00000457654 CARMIL1Q5VZK9 1371 aa30.02■■■□□ 2.4
PSMD11-202ENST00000457654 SYNJ2O15056 1496 aa30■■■□□ 2.39
PSMD11-202ENST00000457654 KIF21BO75037 1637 aa29.94■■■□□ 2.38
PSMD11-202ENST00000457654 RAPGEF2Q9Y4G8 1499 aa29.93■■■□□ 2.38
PSMD11-202ENST00000457654 CHD1O14646 1710 aa29.92■■■□□ 2.38
PSMD11-202ENST00000457654 GRIN2AQ12879 1464 aa29.9■■■□□ 2.38
PSMD11-202ENST00000457654 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
PSMD11-202ENST00000457654 FBLN2P98095 1184 aa29.83■■■□□ 2.37
PSMD11-202ENST00000457654 GOLGA3Q08378 1498 aa29.79■■■□□ 2.36
PSMD11-202ENST00000457654 NUP160Q12769 1436 aa29.74■■■□□ 2.35
PSMD11-202ENST00000457654 CEP170Q5SW79 1584 aa29.74■■■□□ 2.35
PSMD11-202ENST00000457654 EHMT2Q96KQ7 1210 aa29.66■■■□□ 2.34
PSMD11-202ENST00000457654 CTTNBP2Q8WZ74 1663 aa29.66■■■□□ 2.34
PSMD11-202ENST00000457654 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms