RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
RAB5C-207ENST00000550504 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
RAB5C-207ENST00000550504 ABCC9O60706 1549 aa20.44■□□□□ 0.86
RAB5C-207ENST00000550504 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
RAB5C-207ENST00000550504 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
RAB5C-207ENST00000550504 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
RAB5C-207ENST00000550504 NACADO15069 1562 aa19.85■□□□□ 0.77
RAB5C-207ENST00000550504 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
RAB5C-207ENST00000550504 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
RAB5C-207ENST00000550504 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
RAB5C-207ENST00000550504 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
RAB5C-207ENST00000550504 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
RAB5C-207ENST00000550504 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
RAB5C-207ENST00000550504 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
RAB5C-207ENST00000550504 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
RAB5C-207ENST00000550504 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
RAB5C-207ENST00000550504 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
RAB5C-207ENST00000550504 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
RAB5C-207ENST00000550504 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
RAB5C-207ENST00000550504 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
RAB5C-207ENST00000550504 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
RAB5C-207ENST00000550504 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
RAB5C-207ENST00000550504 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
RAB5C-207ENST00000550504 WIZO95785 1651 aa18.46■□□□□ 0.55
RAB5C-207ENST00000550504 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
RAB5C-207ENST00000550504 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
RAB5C-207ENST00000550504 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
RAB5C-207ENST00000550504 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
RAB5C-207ENST00000550504 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
RAB5C-207ENST00000550504 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
RAB5C-207ENST00000550504 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
RAB5C-207ENST00000550504 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
RAB5C-207ENST00000550504 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
RAB5C-207ENST00000550504 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
RAB5C-207ENST00000550504 NESP48681 1621 aa17.82■□□□□ 0.44
RAB5C-207ENST00000550504 CFTRP13569 1480 aa17.8■□□□□ 0.44
RAB5C-207ENST00000550504 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
RAB5C-207ENST00000550504 CUX2O14529 1486 aa17.75■□□□□ 0.43
RAB5C-207ENST00000550504 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
RAB5C-207ENST00000550504 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
RAB5C-207ENST00000550504 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
RAB5C-207ENST00000550504 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
RAB5C-207ENST00000550504 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
RAB5C-207ENST00000550504 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
RAB5C-207ENST00000550504 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
RAB5C-207ENST00000550504 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
RAB5C-207ENST00000550504 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
RAB5C-207ENST00000550504 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
RAB5C-207ENST00000550504 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
RAB5C-207ENST00000550504 CUX1P39880 1505 aa17.44■□□□□ 0.38
RAB5C-207ENST00000550504 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
RAB5C-207ENST00000550504 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
RAB5C-207ENST00000550504 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
RAB5C-207ENST00000550504 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
RAB5C-207ENST00000550504 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
RAB5C-207ENST00000550504 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
RAB5C-207ENST00000550504 BIVM-ERCC5R4GMW8 1640 aa17.37■□□□□ 0.37
RAB5C-207ENST00000550504 WDR62O43379 1518 aa17.37■□□□□ 0.37
RAB5C-207ENST00000550504 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
RAB5C-207ENST00000550504 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
RAB5C-207ENST00000550504 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
RAB5C-207ENST00000550504 SOGA1O94964 1423 aa17.23■□□□□ 0.35
RAB5C-207ENST00000550504 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
RAB5C-207ENST00000550504 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
RAB5C-207ENST00000550504 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
RAB5C-207ENST00000550504 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
RAB5C-207ENST00000550504 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
RAB5C-207ENST00000550504 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
RAB5C-207ENST00000550504 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
RAB5C-207ENST00000550504 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-207ENST00000550504 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
RAB5C-207ENST00000550504 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.324e-6■■■■■ 31
RAB5C-207ENST00000550504 ABCA5Q8WWZ7 1642 aa17.04■□□□□ 0.32
RAB5C-207ENST00000550504 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
RAB5C-207ENST00000550504 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
RAB5C-207ENST00000550504 EEA1Q15075 1411 aa17.01■□□□□ 0.31
RAB5C-207ENST00000550504 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
RAB5C-207ENST00000550504 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
RAB5C-207ENST00000550504 IGF1RP08069 1367 aa16.96■□□□□ 0.31
RAB5C-207ENST00000550504 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
RAB5C-207ENST00000550504 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
RAB5C-207ENST00000550504 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
RAB5C-207ENST00000550504 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
RAB5C-207ENST00000550504 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
RAB5C-207ENST00000550504 CUL7Q14999 1698 aa16.88■□□□□ 0.29
RAB5C-207ENST00000550504 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
RAB5C-207ENST00000550504 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
RAB5C-207ENST00000550504 PRXQ9BXM0 1461 aa16.85■□□□□ 0.29
RAB5C-207ENST00000550504 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
RAB5C-207ENST00000550504 KIF21BO75037 1637 aa16.82■□□□□ 0.28
RAB5C-207ENST00000550504 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
RAB5C-207ENST00000550504 FBLN2P98095 1184 aa16.81■□□□□ 0.28
RAB5C-207ENST00000550504 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
RAB5C-207ENST00000550504 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
RAB5C-207ENST00000550504 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
RAB5C-207ENST00000550504 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
RAB5C-207ENST00000550504 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
RAB5C-207ENST00000550504 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
RAB5C-207ENST00000550504 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
RAB5C-207ENST00000550504 CHD1O14646 1710 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms