RNA–Protein interactions for RNA: ENST00000617133.4

SEM1-217, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-217ENST00000617133 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
SEM1-217ENST00000617133 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
SEM1-217ENST00000617133 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
SEM1-217ENST00000617133 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
SEM1-217ENST00000617133 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
SEM1-217ENST00000617133 FOXD1Q16676 465 aa17.94■□□□□ 0.46
SEM1-217ENST00000617133 PPP6R1Q9UPN7 881 aa17.48■□□□□ 0.39
SEM1-217ENST00000617133 ADRA2BP18089 450 aa17.47■□□□□ 0.39
SEM1-217ENST00000617133 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
SEM1-217ENST00000617133 MSH5O43196 834 aa16.41■□□□□ 0.22
SEM1-217ENST00000617133 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
SEM1-217ENST00000617133 KCNA4P22459 653 aa16.22■□□□□ 0.19
SEM1-217ENST00000617133 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
SEM1-217ENST00000617133 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
SEM1-217ENST00000617133 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
SEM1-217ENST00000617133 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
SEM1-217ENST00000617133 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
SEM1-217ENST00000617133 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
SEM1-217ENST00000617133 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
SEM1-217ENST00000617133 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
SEM1-217ENST00000617133 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
SEM1-217ENST00000617133 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
SEM1-217ENST00000617133 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
SEM1-217ENST00000617133 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
SEM1-217ENST00000617133 ZBTB22O15209 634 aa14.95□□□□□ -0.02
SEM1-217ENST00000617133 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
SEM1-217ENST00000617133 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
SEM1-217ENST00000617133 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
SEM1-217ENST00000617133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.086e-10■■□□□ 13.6
SEM1-217ENST00000617133 POTEDQ86YR6 584 aa14.52□□□□□ -0.09
SEM1-217ENST00000617133 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
SEM1-217ENST00000617133 U3KPZ7 1027 aaPredicted RBP14.36□□□□□ -0.11
SEM1-217ENST00000617133 ATXN8OSP0DMR3 200 aa14.29□□□□□ -0.12
SEM1-217ENST00000617133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
SEM1-217ENST00000617133 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
SEM1-217ENST00000617133 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
SEM1-217ENST00000617133 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
SEM1-217ENST00000617133 RNF39Q9H2S5 420 aa14.11□□□□□ -0.15
SEM1-217ENST00000617133 APLP2Q06481 763 aa14.01□□□□□ -0.17
SEM1-217ENST00000617133 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
SEM1-217ENST00000617133 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
SEM1-217ENST00000617133 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
SEM1-217ENST00000617133 CAPN15O75808 1086 aa13.8□□□□□ -0.2
SEM1-217ENST00000617133 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
SEM1-217ENST00000617133 POLA2Q14181 598 aa13.63□□□□□ -0.23
SEM1-217ENST00000617133 FKBP8Q14318 412 aa13.59□□□□□ -0.23
SEM1-217ENST00000617133 ABCB7O75027 752 aa13.58□□□□□ -0.24
SEM1-217ENST00000617133 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
SEM1-217ENST00000617133 DSG3P32926 999 aa13.52□□□□□ -0.25
SEM1-217ENST00000617133 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
SEM1-217ENST00000617133 FBLN2P98095 1184 aa13.47□□□□□ -0.25
SEM1-217ENST00000617133 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
SEM1-217ENST00000617133 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
SEM1-217ENST00000617133 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
SEM1-217ENST00000617133 PROM2Q8N271 834 aa13.15□□□□□ -0.3
SEM1-217ENST00000617133 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
SEM1-217ENST00000617133 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
SEM1-217ENST00000617133 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
SEM1-217ENST00000617133 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
SEM1-217ENST00000617133 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
SEM1-217ENST00000617133 FBXO3Q9UK99 471 aa13□□□□□ -0.33
SEM1-217ENST00000617133 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
SEM1-217ENST00000617133 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
SEM1-217ENST00000617133 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
SEM1-217ENST00000617133 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
SEM1-217ENST00000617133 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
SEM1-217ENST00000617133 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
SEM1-217ENST00000617133 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
SEM1-217ENST00000617133 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
SEM1-217ENST00000617133 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
SEM1-217ENST00000617133 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
SEM1-217ENST00000617133 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
SEM1-217ENST00000617133 MIER1Q8N108 512 aa12.59□□□□□ -0.39
SEM1-217ENST00000617133 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
SEM1-217ENST00000617133 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
SEM1-217ENST00000617133 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
SEM1-217ENST00000617133 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
SEM1-217ENST00000617133 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
SEM1-217ENST00000617133 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
SEM1-217ENST00000617133 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
SEM1-217ENST00000617133 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
SEM1-217ENST00000617133 PKD2Q13563 968 aa12.37□□□□□ -0.43
SEM1-217ENST00000617133 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
SEM1-217ENST00000617133 NUBP1P53384 320 aa12.26□□□□□ -0.45
SEM1-217ENST00000617133 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
SEM1-217ENST00000617133 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
SEM1-217ENST00000617133 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
SEM1-217ENST00000617133 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
SEM1-217ENST00000617133 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
SEM1-217ENST00000617133 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
SEM1-217ENST00000617133 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
SEM1-217ENST00000617133 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
SEM1-217ENST00000617133 GSE1Q14687 1217 aa12.17□□□□□ -0.46
SEM1-217ENST00000617133 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
SEM1-217ENST00000617133 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
SEM1-217ENST00000617133 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
SEM1-217ENST00000617133 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
SEM1-217ENST00000617133 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
SEM1-217ENST00000617133 RGL2O15211 777 aa12.13□□□□□ -0.47
SEM1-217ENST00000617133 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms