RNA–Protein interactions for RNA: ENST00000466986.5

SEM1-207, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-207ENST00000466986 NISCHQ9Y2I1 1504 aa18.34■□□□□ 0.53
SEM1-207ENST00000466986 CCDC180Q9P1Z9 1646 aa16.31■□□□□ 0.2
SEM1-207ENST00000466986 ABCC9O60706 1549 aa15.62■□□□□ 0.09
SEM1-207ENST00000466986 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
SEM1-207ENST00000466986 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
SEM1-207ENST00000466986 NACADO15069 1562 aa15.37■□□□□ 0.05
SEM1-207ENST00000466986 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
SEM1-207ENST00000466986 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
SEM1-207ENST00000466986 DCAF8L2P0C7V8 631 aa15.01□□□□□ -0.01
SEM1-207ENST00000466986 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
SEM1-207ENST00000466986 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
SEM1-207ENST00000466986 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
SEM1-207ENST00000466986 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
SEM1-207ENST00000466986 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
SEM1-207ENST00000466986 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
SEM1-207ENST00000466986 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
SEM1-207ENST00000466986 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
SEM1-207ENST00000466986 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
SEM1-207ENST00000466986 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
SEM1-207ENST00000466986 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
SEM1-207ENST00000466986 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
SEM1-207ENST00000466986 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
SEM1-207ENST00000466986 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
SEM1-207ENST00000466986 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
SEM1-207ENST00000466986 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
SEM1-207ENST00000466986 MROH2BQ7Z745 1585 aa14.01□□□□□ -0.17
SEM1-207ENST00000466986 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
SEM1-207ENST00000466986 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
SEM1-207ENST00000466986 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
SEM1-207ENST00000466986 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
SEM1-207ENST00000466986 WIZO95785 1651 aa13.79□□□□□ -0.2
SEM1-207ENST00000466986 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
SEM1-207ENST00000466986 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
SEM1-207ENST00000466986 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
SEM1-207ENST00000466986 CFTRP13569 1480 aa13.67□□□□□ -0.22
SEM1-207ENST00000466986 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
SEM1-207ENST00000466986 CUX2O14529 1486 aa13.55□□□□□ -0.24
SEM1-207ENST00000466986 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
SEM1-207ENST00000466986 NESP48681 1621 aa13.52□□□□□ -0.25
SEM1-207ENST00000466986 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
SEM1-207ENST00000466986 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
SEM1-207ENST00000466986 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
SEM1-207ENST00000466986 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
SEM1-207ENST00000466986 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
SEM1-207ENST00000466986 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
SEM1-207ENST00000466986 WDR62O43379 1518 aa13.41□□□□□ -0.26
SEM1-207ENST00000466986 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
SEM1-207ENST00000466986 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
SEM1-207ENST00000466986 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
SEM1-207ENST00000466986 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
SEM1-207ENST00000466986 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
SEM1-207ENST00000466986 IFT140Q96RY7 1462 aa13.25□□□□□ -0.29
SEM1-207ENST00000466986 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
SEM1-207ENST00000466986 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
SEM1-207ENST00000466986 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
SEM1-207ENST00000466986 CUX1P39880 1505 aa13.15□□□□□ -0.3
SEM1-207ENST00000466986 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
SEM1-207ENST00000466986 SOGA1O94964 1423 aa13.13□□□□□ -0.31
SEM1-207ENST00000466986 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
SEM1-207ENST00000466986 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
SEM1-207ENST00000466986 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
SEM1-207ENST00000466986 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
SEM1-207ENST00000466986 TRIM41Q8WV44 630 aa13.01□□□□□ -0.33
SEM1-207ENST00000466986 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
SEM1-207ENST00000466986 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
SEM1-207ENST00000466986 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
SEM1-207ENST00000466986 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
SEM1-207ENST00000466986 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
SEM1-207ENST00000466986 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
SEM1-207ENST00000466986 ERICH3Q5RHP9 1530 aa12.98□□□□□ -0.33
SEM1-207ENST00000466986 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
SEM1-207ENST00000466986 OSCARQ8IYS5 282 aa12.96□□□□□ -0.33
SEM1-207ENST00000466986 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
SEM1-207ENST00000466986 TDRD9Q8NDG6 1382 aaKnown RBP12.95□□□□□ -0.34
SEM1-207ENST00000466986 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
SEM1-207ENST00000466986 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
SEM1-207ENST00000466986 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
SEM1-207ENST00000466986 FHAD1B1AJZ9 1412 aa12.89□□□□□ -0.35
SEM1-207ENST00000466986 EEA1Q15075 1411 aa12.88□□□□□ -0.35
SEM1-207ENST00000466986 IGF1RP08069 1367 aa12.87□□□□□ -0.35
SEM1-207ENST00000466986 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
SEM1-207ENST00000466986 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
SEM1-207ENST00000466986 PBRM1Q86U86 1689 aa12.83□□□□□ -0.36
SEM1-207ENST00000466986 NUP160Q12769 1436 aa12.81□□□□□ -0.36
SEM1-207ENST00000466986 CUL7Q14999 1698 aa12.81□□□□□ -0.36
SEM1-207ENST00000466986 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
SEM1-207ENST00000466986 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
SEM1-207ENST00000466986 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
SEM1-207ENST00000466986 CHIC1Q5VXU3 224 aa12.76□□□□□ -0.37
SEM1-207ENST00000466986 CLASP1Q7Z460 1538 aa12.75□□□□□ -0.37
SEM1-207ENST00000466986 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
SEM1-207ENST00000466986 PRXQ9BXM0 1461 aa12.72□□□□□ -0.37
SEM1-207ENST00000466986 CHD1O14646 1710 aa12.72□□□□□ -0.37
SEM1-207ENST00000466986 RAPGEF2Q9Y4G8 1499 aa12.72□□□□□ -0.37
SEM1-207ENST00000466986 FBLN2P98095 1184 aa12.71□□□□□ -0.37
SEM1-207ENST00000466986 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
SEM1-207ENST00000466986 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
SEM1-207ENST00000466986 JPH4Q96JJ6 628 aa12.65□□□□□ -0.38
SEM1-207ENST00000466986 CEP170Q5SW79 1584 aa12.64□□□□□ -0.39
SEM1-207ENST00000466986 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms