RNA–Protein interactions for RNA: ENST00000447973.5

EWSR1-213, Transcript of EWS RNA binding protein 1, humanhuman

TSL 4

Gene EWSR1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-213ENST00000447973 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
EWSR1-213ENST00000447973 ABCC9O60706 1549 aa31.39■■■□□ 2.62
EWSR1-213ENST00000447973 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.58
EWSR1-213ENST00000447973 RB1CC1Q8TDY2 1594 aa29.74■■■□□ 2.35
EWSR1-213ENST00000447973 DNAJC5BQ9UF47 199 aa29.69■■■□□ 2.34
EWSR1-213ENST00000447973 NACADO15069 1562 aa29.53■■■□□ 2.32
EWSR1-213ENST00000447973 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
EWSR1-213ENST00000447973 PABPN1Q86U42 306 aaKnown RBP eCLIP29.25■■■□□ 2.27
EWSR1-213ENST00000447973 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
EWSR1-213ENST00000447973 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
EWSR1-213ENST00000447973 BICRAQ9NZM4 1560 aa29.03■■■□□ 2.24
EWSR1-213ENST00000447973 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
EWSR1-213ENST00000447973 DCAF1Q9Y4B6 1507 aa28.71■■■□□ 2.19
EWSR1-213ENST00000447973 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
EWSR1-213ENST00000447973 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
EWSR1-213ENST00000447973 CC2D2AQ9P2K1 1620 aa28.33■■■□□ 2.13
EWSR1-213ENST00000447973 CECR2Q9BXF3 1484 aa28.26■■■□□ 2.11
EWSR1-213ENST00000447973 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
EWSR1-213ENST00000447973 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
EWSR1-213ENST00000447973 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
EWSR1-213ENST00000447973 DNAJC5Q9H3Z4 198 aa27.21■■□□□ 1.95
EWSR1-213ENST00000447973 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
EWSR1-213ENST00000447973 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
EWSR1-213ENST00000447973 SMARCA2P51531 1590 aa27.06■■□□□ 1.92
EWSR1-213ENST00000447973 CUX2O14529 1486 aa27.01■■□□□ 1.91
EWSR1-213ENST00000447973 ERCC6Q03468 1493 aa27■■□□□ 1.91
EWSR1-213ENST00000447973 NESP48681 1621 aa26.99■■□□□ 1.91
EWSR1-213ENST00000447973 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
EWSR1-213ENST00000447973 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
EWSR1-213ENST00000447973 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
EWSR1-213ENST00000447973 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
EWSR1-213ENST00000447973 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
EWSR1-213ENST00000447973 LAMC3Q9Y6N6 1575 aa26.65■■□□□ 1.86
EWSR1-213ENST00000447973 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
EWSR1-213ENST00000447973 WIZO95785 1651 aa26.52■■□□□ 1.84
EWSR1-213ENST00000447973 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
EWSR1-213ENST00000447973 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
EWSR1-213ENST00000447973 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
EWSR1-213ENST00000447973 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
EWSR1-213ENST00000447973 WDR62O43379 1518 aa26.27■■□□□ 1.8
EWSR1-213ENST00000447973 CFTRP13569 1480 aa26.17■■□□□ 1.78
EWSR1-213ENST00000447973 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
EWSR1-213ENST00000447973 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
EWSR1-213ENST00000447973 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
EWSR1-213ENST00000447973 URB2Q14146 1524 aaKnown RBP26.02■■□□□ 1.76
EWSR1-213ENST00000447973 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
EWSR1-213ENST00000447973 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
EWSR1-213ENST00000447973 PRDM2Q13029 1718 aa25.81■■□□□ 1.72
EWSR1-213ENST00000447973 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
EWSR1-213ENST00000447973 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
EWSR1-213ENST00000447973 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
EWSR1-213ENST00000447973 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
EWSR1-213ENST00000447973 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
EWSR1-213ENST00000447973 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
EWSR1-213ENST00000447973 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
EWSR1-213ENST00000447973 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
EWSR1-213ENST00000447973 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
EWSR1-213ENST00000447973 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
EWSR1-213ENST00000447973 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
EWSR1-213ENST00000447973 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.672e-7■■■■□ 21.3
EWSR1-213ENST00000447973 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
EWSR1-213ENST00000447973 ARHGEF11O15085 1522 aa25.41■■□□□ 1.66
EWSR1-213ENST00000447973 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
EWSR1-213ENST00000447973 CHD1O14646 1710 aa25.34■■□□□ 1.65
EWSR1-213ENST00000447973 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
EWSR1-213ENST00000447973 SOGA1O94964 1423 aa25.28■■□□□ 1.64
EWSR1-213ENST00000447973 CUX1P39880 1505 aa25.23■■□□□ 1.63
EWSR1-213ENST00000447973 FGD5Q6ZNL6 1462 aa25.23■■□□□ 1.63
EWSR1-213ENST00000447973 FBLN2P98095 1184 aa25.23■■□□□ 1.63
EWSR1-213ENST00000447973 CYB5RLQ6IPT4 315 aa25.23■■□□□ 1.63
EWSR1-213ENST00000447973 ARAP1Q96P48 1450 aa25.19■■□□□ 1.62
EWSR1-213ENST00000447973 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
EWSR1-213ENST00000447973 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
EWSR1-213ENST00000447973 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
EWSR1-213ENST00000447973 GRIN2BQ13224 1484 aa25.04■■□□□ 1.6
EWSR1-213ENST00000447973 MAGI1Q96QZ7 1491 aaPredicted RBP25.03■■□□□ 1.6
EWSR1-213ENST00000447973 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
EWSR1-213ENST00000447973 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
EWSR1-213ENST00000447973 SYNJ2O15056 1496 aa24.97■■□□□ 1.59
EWSR1-213ENST00000447973 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
EWSR1-213ENST00000447973 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
EWSR1-213ENST00000447973 ABCA10Q8WWZ4 1543 aa24.93■■□□□ 1.58
EWSR1-213ENST00000447973 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
EWSR1-213ENST00000447973 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
EWSR1-213ENST00000447973 TRHP20396 242 aaPredicted RBP24.91■■□□□ 1.58
EWSR1-213ENST00000447973 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
EWSR1-213ENST00000447973 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
EWSR1-213ENST00000447973 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
EWSR1-213ENST00000447973 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
EWSR1-213ENST00000447973 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
EWSR1-213ENST00000447973 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
EWSR1-213ENST00000447973 CEP170Q5SW79 1584 aa24.7■■□□□ 1.54
EWSR1-213ENST00000447973 NUP160Q12769 1436 aa24.69■■□□□ 1.54
EWSR1-213ENST00000447973 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
EWSR1-213ENST00000447973 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
EWSR1-213ENST00000447973 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
EWSR1-213ENST00000447973 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
EWSR1-213ENST00000447973 JPH4Q96JJ6 628 aa24.42■■□□□ 1.5
EWSR1-213ENST00000447973 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
EWSR1-213ENST00000447973 IGF1RP08069 1367 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms