RNA–Protein interactions for RNA: ENST00000618105.4

SEM1-219, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 544 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-219ENST00000618105 NISCHQ9Y2I1 1504 aa14.98□□□□□ -0.01
SEM1-219ENST00000618105 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
SEM1-219ENST00000618105 ABCC9O60706 1549 aa14.84□□□□□ -0.03
SEM1-219ENST00000618105 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
SEM1-219ENST00000618105 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
SEM1-219ENST00000618105 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
SEM1-219ENST00000618105 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEM1-219ENST00000618105 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
SEM1-219ENST00000618105 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
SEM1-219ENST00000618105 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
SEM1-219ENST00000618105 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
SEM1-219ENST00000618105 NACADO15069 1562 aa13.41□□□□□ -0.26
SEM1-219ENST00000618105 CUX2O14529 1486 aa13.3□□□□□ -0.28
SEM1-219ENST00000618105 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
SEM1-219ENST00000618105 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
SEM1-219ENST00000618105 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
SEM1-219ENST00000618105 MYO15BQ96JP2 1530 aa12.96□□□□□ -0.33
SEM1-219ENST00000618105 ERCC6Q03468 1493 aa12.84□□□□□ -0.35
SEM1-219ENST00000618105 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
SEM1-219ENST00000618105 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
SEM1-219ENST00000618105 AEBP2Q6ZN18 517 aaPredicted RBP12.64□□□□□ -0.39
SEM1-219ENST00000618105 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
SEM1-219ENST00000618105 NESP48681 1621 aa12.48□□□□□ -0.41
SEM1-219ENST00000618105 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
SEM1-219ENST00000618105 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
SEM1-219ENST00000618105 RIMBP3CA6NJZ7 1639 aa12.45□□□□□ -0.42
SEM1-219ENST00000618105 RIMBP3BA6NNM3 1639 aa12.45□□□□□ -0.42
SEM1-219ENST00000618105 RIMBP3Q9UFD9 1639 aa12.45□□□□□ -0.42
SEM1-219ENST00000618105 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
SEM1-219ENST00000618105 DCAF1Q9Y4B6 1507 aa12.39□□□□□ -0.43
SEM1-219ENST00000618105 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
SEM1-219ENST00000618105 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
SEM1-219ENST00000618105 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
SEM1-219ENST00000618105 KIF21AQ7Z4S6 1674 aa12.31□□□□□ -0.44
SEM1-219ENST00000618105 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
SEM1-219ENST00000618105 WDR62O43379 1518 aa12.24□□□□□ -0.45
SEM1-219ENST00000618105 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
SEM1-219ENST00000618105 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
SEM1-219ENST00000618105 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
SEM1-219ENST00000618105 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
SEM1-219ENST00000618105 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
SEM1-219ENST00000618105 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
SEM1-219ENST00000618105 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
SEM1-219ENST00000618105 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
SEM1-219ENST00000618105 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
SEM1-219ENST00000618105 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
SEM1-219ENST00000618105 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
SEM1-219ENST00000618105 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
SEM1-219ENST00000618105 PEG3Q9GZU2 1588 aa11.89□□□□□ -0.51
SEM1-219ENST00000618105 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
SEM1-219ENST00000618105 KDM4FA0A1W2PPD8 638 aa11.81□□□□□ -0.52
SEM1-219ENST00000618105 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
SEM1-219ENST00000618105 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
SEM1-219ENST00000618105 CHD1O14646 1710 aa11.79□□□□□ -0.52
SEM1-219ENST00000618105 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
SEM1-219ENST00000618105 LMTK3Q96Q04 1460 aa11.77□□□□□ -0.52
SEM1-219ENST00000618105 FANCD2Q9BXW9 1451 aa11.77□□□□□ -0.52
SEM1-219ENST00000618105 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
SEM1-219ENST00000618105 SOCS7O14512 581 aa11.73□□□□□ -0.53
SEM1-219ENST00000618105 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.54
SEM1-219ENST00000618105 HECW2Q9P2P5 1572 aa11.7□□□□□ -0.54
SEM1-219ENST00000618105 CLASP1Q7Z460 1538 aa11.7□□□□□ -0.54
SEM1-219ENST00000618105 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
SEM1-219ENST00000618105 KIF13AQ9H1H9 1805 aa11.64□□□□□ -0.55
SEM1-219ENST00000618105 ILDR2Q71H61 639 aa11.62□□□□□ -0.55
SEM1-219ENST00000618105 CFTRP13569 1480 aa11.61□□□□□ -0.55
SEM1-219ENST00000618105 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
SEM1-219ENST00000618105 MROH2BQ7Z745 1585 aa11.52□□□□□ -0.57
SEM1-219ENST00000618105 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
SEM1-219ENST00000618105 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
SEM1-219ENST00000618105 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
SEM1-219ENST00000618105 ADGRL1O94910 1474 aa11.49□□□□□ -0.57
SEM1-219ENST00000618105 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
SEM1-219ENST00000618105 KDM6BO15054 1643 aa11.48□□□□□ -0.57
SEM1-219ENST00000618105 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
SEM1-219ENST00000618105 FBLN2P98095 1184 aa11.46□□□□□ -0.57
SEM1-219ENST00000618105 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
SEM1-219ENST00000618105 DISP3Q9P2K9 1392 aa11.41□□□□□ -0.58
SEM1-219ENST00000618105 ABCC10Q5T3U5 1492 aa11.4□□□□□ -0.58
SEM1-219ENST00000618105 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
SEM1-219ENST00000618105 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
SEM1-219ENST00000618105 MAGI1Q96QZ7 1491 aaPredicted RBP11.34□□□□□ -0.59
SEM1-219ENST00000618105 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
SEM1-219ENST00000618105 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
SEM1-219ENST00000618105 SPATA31D1Q6ZQQ2 1576 aa11.33□□□□□ -0.6
SEM1-219ENST00000618105 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
SEM1-219ENST00000618105 MAPKBP1O60336 1514 aa11.31□□□□□ -0.6
SEM1-219ENST00000618105 WIZO95785 1651 aa11.3□□□□□ -0.6
SEM1-219ENST00000618105 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
SEM1-219ENST00000618105 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
SEM1-219ENST00000618105 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
SEM1-219ENST00000618105 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
SEM1-219ENST00000618105 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
SEM1-219ENST00000618105 TDRD9Q8NDG6 1382 aaKnown RBP11.23□□□□□ -0.61
SEM1-219ENST00000618105 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
SEM1-219ENST00000618105 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
SEM1-219ENST00000618105 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
SEM1-219ENST00000618105 TOP2BQ02880 1626 aa11.18□□□□□ -0.62
SEM1-219ENST00000618105 PPRC1Q5VV67 1664 aaKnown RBP11.17□□□□□ -0.62
SEM1-219ENST00000618105 COL17A1Q9UMD9 1497 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms