RNA–Protein interactions for RNA: ENST00000613919.4

SEM1-214, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 610 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-214ENST00000613919 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.21
SEM1-214ENST00000613919 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
SEM1-214ENST00000613919 ABCC9O60706 1549 aa20.14■□□□□ 0.81
SEM1-214ENST00000613919 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
SEM1-214ENST00000613919 NACADO15069 1562 aa19.08■□□□□ 0.65
SEM1-214ENST00000613919 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
SEM1-214ENST00000613919 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
SEM1-214ENST00000613919 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
SEM1-214ENST00000613919 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
SEM1-214ENST00000613919 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
SEM1-214ENST00000613919 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
SEM1-214ENST00000613919 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
SEM1-214ENST00000613919 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
SEM1-214ENST00000613919 SCRIBQ14160 1630 aa18.46■□□□□ 0.55
SEM1-214ENST00000613919 SHROOM4Q9ULL8 1493 aa18.38■□□□□ 0.53
SEM1-214ENST00000613919 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
SEM1-214ENST00000613919 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
SEM1-214ENST00000613919 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
SEM1-214ENST00000613919 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
SEM1-214ENST00000613919 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
SEM1-214ENST00000613919 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
SEM1-214ENST00000613919 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
SEM1-214ENST00000613919 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
SEM1-214ENST00000613919 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
SEM1-214ENST00000613919 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
SEM1-214ENST00000613919 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
SEM1-214ENST00000613919 PEG3Q9GZU2 1588 aa17.43■□□□□ 0.38
SEM1-214ENST00000613919 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
SEM1-214ENST00000613919 NESP48681 1621 aa17.35■□□□□ 0.37
SEM1-214ENST00000613919 CUX2O14529 1486 aa17.26■□□□□ 0.35
SEM1-214ENST00000613919 WIZO95785 1651 aa17.23■□□□□ 0.35
SEM1-214ENST00000613919 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
SEM1-214ENST00000613919 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
SEM1-214ENST00000613919 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
SEM1-214ENST00000613919 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
SEM1-214ENST00000613919 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
SEM1-214ENST00000613919 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
SEM1-214ENST00000613919 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
SEM1-214ENST00000613919 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
SEM1-214ENST00000613919 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
SEM1-214ENST00000613919 CFTRP13569 1480 aa16.95■□□□□ 0.3
SEM1-214ENST00000613919 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
SEM1-214ENST00000613919 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
SEM1-214ENST00000613919 WDR62O43379 1518 aa16.91■□□□□ 0.3
SEM1-214ENST00000613919 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
SEM1-214ENST00000613919 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
SEM1-214ENST00000613919 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
SEM1-214ENST00000613919 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
SEM1-214ENST00000613919 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
SEM1-214ENST00000613919 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
SEM1-214ENST00000613919 ABCC8Q09428 1581 aa16.56■□□□□ 0.24
SEM1-214ENST00000613919 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
SEM1-214ENST00000613919 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
SEM1-214ENST00000613919 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
SEM1-214ENST00000613919 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
SEM1-214ENST00000613919 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
SEM1-214ENST00000613919 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
SEM1-214ENST00000613919 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
SEM1-214ENST00000613919 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEM1-214ENST00000613919 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
SEM1-214ENST00000613919 CUX1P39880 1505 aa16.4■□□□□ 0.22
SEM1-214ENST00000613919 SOGA1O94964 1423 aa16.39■□□□□ 0.21
SEM1-214ENST00000613919 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
SEM1-214ENST00000613919 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
SEM1-214ENST00000613919 FBLN2P98095 1184 aa16.3■□□□□ 0.2
SEM1-214ENST00000613919 CHD1O14646 1710 aa16.27■□□□□ 0.19
SEM1-214ENST00000613919 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.19
SEM1-214ENST00000613919 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.19
SEM1-214ENST00000613919 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.19
SEM1-214ENST00000613919 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
SEM1-214ENST00000613919 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
SEM1-214ENST00000613919 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
SEM1-214ENST00000613919 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
SEM1-214ENST00000613919 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
SEM1-214ENST00000613919 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
SEM1-214ENST00000613919 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
SEM1-214ENST00000613919 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
SEM1-214ENST00000613919 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
SEM1-214ENST00000613919 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
SEM1-214ENST00000613919 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
SEM1-214ENST00000613919 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
SEM1-214ENST00000613919 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
SEM1-214ENST00000613919 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
SEM1-214ENST00000613919 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
SEM1-214ENST00000613919 PBRM1Q86U86 1689 aa16.12■□□□□ 0.17
SEM1-214ENST00000613919 CLASP1Q7Z460 1538 aa16.12■□□□□ 0.17
SEM1-214ENST00000613919 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
SEM1-214ENST00000613919 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
SEM1-214ENST00000613919 ADAMTS12P58397 1594 aa16.02■□□□□ 0.16
SEM1-214ENST00000613919 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
SEM1-214ENST00000613919 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
SEM1-214ENST00000613919 NUP160Q12769 1436 aa15.96■□□□□ 0.15
SEM1-214ENST00000613919 CEP170Q5SW79 1584 aa15.96■□□□□ 0.14
SEM1-214ENST00000613919 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
SEM1-214ENST00000613919 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
SEM1-214ENST00000613919 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
SEM1-214ENST00000613919 IGF1RP08069 1367 aa15.85■□□□□ 0.13
SEM1-214ENST00000613919 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
SEM1-214ENST00000613919 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
SEM1-214ENST00000613919 JPH4Q96JJ6 628 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms