RNA–Protein interactions for RNA: ENST00000552851.1

RPL18-216, Transcript of ribosomal protein L18, humanhuman

TSL 5

Gene RPL18, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18-216ENST00000552851 NISCHQ9Y2I1 1504 aa31.21■■■□□ 2.59
RPL18-216ENST00000552851 ABCC9O60706 1549 aa28.63■■■□□ 2.17
RPL18-216ENST00000552851 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
RPL18-216ENST00000552851 DNAJC5BQ9UF47 199 aa27.17■■□□□ 1.94
RPL18-216ENST00000552851 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
RPL18-216ENST00000552851 NACADO15069 1562 aa26.71■■□□□ 1.87
RPL18-216ENST00000552851 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
RPL18-216ENST00000552851 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
RPL18-216ENST00000552851 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
RPL18-216ENST00000552851 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
RPL18-216ENST00000552851 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
RPL18-216ENST00000552851 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
RPL18-216ENST00000552851 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
RPL18-216ENST00000552851 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
RPL18-216ENST00000552851 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
RPL18-216ENST00000552851 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
RPL18-216ENST00000552851 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
RPL18-216ENST00000552851 EIF4G1Q04637 1599 aaKnown RBP25.67■■□□□ 1.7
RPL18-216ENST00000552851 DNAJC5Q9H3Z4 198 aa25.18■■□□□ 1.62
RPL18-216ENST00000552851 CUX2O14529 1486 aa24.73■■□□□ 1.55
RPL18-216ENST00000552851 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
RPL18-216ENST00000552851 NCAPD3P42695 1498 aa24.63■■□□□ 1.53
RPL18-216ENST00000552851 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
RPL18-216ENST00000552851 NESP48681 1621 aa24.5■■□□□ 1.51
RPL18-216ENST00000552851 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
RPL18-216ENST00000552851 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
RPL18-216ENST00000552851 HMGXB3Q12766 1538 aa24.44■■□□□ 1.5
RPL18-216ENST00000552851 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
RPL18-216ENST00000552851 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
RPL18-216ENST00000552851 KIF21AQ7Z4S6 1674 aa24.26■■□□□ 1.47
RPL18-216ENST00000552851 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
RPL18-216ENST00000552851 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
RPL18-216ENST00000552851 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
RPL18-216ENST00000552851 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.45
RPL18-216ENST00000552851 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
RPL18-216ENST00000552851 PDS5BQ9NTI5 1447 aa24.02■■□□□ 1.44
RPL18-216ENST00000552851 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
RPL18-216ENST00000552851 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
RPL18-216ENST00000552851 WIZO95785 1651 aa23.86■■□□□ 1.41
RPL18-216ENST00000552851 WDR62O43379 1518 aa23.84■■□□□ 1.41
RPL18-216ENST00000552851 CEP164Q9UPV0 1460 aa23.71■■□□□ 1.39
RPL18-216ENST00000552851 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
RPL18-216ENST00000552851 OSCARQ8IYS5 282 aa23.57■■□□□ 1.36
RPL18-216ENST00000552851 CFTRP13569 1480 aa23.53■■□□□ 1.36
RPL18-216ENST00000552851 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
RPL18-216ENST00000552851 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
RPL18-216ENST00000552851 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
RPL18-216ENST00000552851 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
RPL18-216ENST00000552851 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
RPL18-216ENST00000552851 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
RPL18-216ENST00000552851 RSF1Q96T23 1441 aaPredicted RBP23.4■■□□□ 1.34
RPL18-216ENST00000552851 ZNF608Q9ULD9 1512 aaPredicted RBP23.3■■□□□ 1.32
RPL18-216ENST00000552851 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
RPL18-216ENST00000552851 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
RPL18-216ENST00000552851 CHD1O14646 1710 aa23.18■■□□□ 1.3
RPL18-216ENST00000552851 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
RPL18-216ENST00000552851 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
RPL18-216ENST00000552851 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
RPL18-216ENST00000552851 CYB5RLQ6IPT4 315 aa23.1■■□□□ 1.29
RPL18-216ENST00000552851 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
RPL18-216ENST00000552851 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
RPL18-216ENST00000552851 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
RPL18-216ENST00000552851 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.286e-8■■■■■ 50
RPL18-216ENST00000552851 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
RPL18-216ENST00000552851 FBLN2P98095 1184 aa22.99■■□□□ 1.27
RPL18-216ENST00000552851 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
RPL18-216ENST00000552851 POLA1P09884 1462 aaPredicted RBP22.91■■□□□ 1.26
RPL18-216ENST00000552851 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
RPL18-216ENST00000552851 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
RPL18-216ENST00000552851 SOGA1O94964 1423 aa22.78■■□□□ 1.24
RPL18-216ENST00000552851 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
RPL18-216ENST00000552851 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
RPL18-216ENST00000552851 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
RPL18-216ENST00000552851 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
RPL18-216ENST00000552851 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
RPL18-216ENST00000552851 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
RPL18-216ENST00000552851 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
RPL18-216ENST00000552851 CUX1P39880 1505 aa22.65■■□□□ 1.22
RPL18-216ENST00000552851 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
RPL18-216ENST00000552851 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
RPL18-216ENST00000552851 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
RPL18-216ENST00000552851 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
RPL18-216ENST00000552851 GAPVD1Q14C86 1478 aa22.53■■□□□ 1.2
RPL18-216ENST00000552851 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
RPL18-216ENST00000552851 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
RPL18-216ENST00000552851 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
RPL18-216ENST00000552851 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
RPL18-216ENST00000552851 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
RPL18-216ENST00000552851 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
RPL18-216ENST00000552851 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
RPL18-216ENST00000552851 SHROOM2Q13796 1616 aa22.26■■□□□ 1.15
RPL18-216ENST00000552851 NUP160Q12769 1436 aa22.24■■□□□ 1.15
RPL18-216ENST00000552851 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.151e-7■■■■■ 66.8
RPL18-216ENST00000552851 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
RPL18-216ENST00000552851 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
RPL18-216ENST00000552851 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
RPL18-216ENST00000552851 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
RPL18-216ENST00000552851 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
RPL18-216ENST00000552851 PRG4Q92954 1404 aaPredicted RBP22.11■■□□□ 1.13
RPL18-216ENST00000552851 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms