RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
IPO4-209ENST00000559588 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
IPO4-209ENST00000559588 HRCP23327 699 aa18.07■□□□□ 0.48
IPO4-209ENST00000559588 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
IPO4-209ENST00000559588 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
IPO4-209ENST00000559588 MYT1Q01538 1121 aa18.03■□□□□ 0.48
IPO4-209ENST00000559588 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
IPO4-209ENST00000559588 PCGF6Q9BYE7 350 aa17.85■□□□□ 0.45
IPO4-209ENST00000559588 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
IPO4-209ENST00000559588 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
IPO4-209ENST00000559588 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
IPO4-209ENST00000559588 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
IPO4-209ENST00000559588 ABCC9O60706 1549 aa17.05■□□□□ 0.32
IPO4-209ENST00000559588 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
IPO4-209ENST00000559588 BCL11AQ9H165 835 aa16.96■□□□□ 0.31
IPO4-209ENST00000559588 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
IPO4-209ENST00000559588 NEUROD1Q13562 356 aa16.95■□□□□ 0.3
IPO4-209ENST00000559588 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
IPO4-209ENST00000559588 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
IPO4-209ENST00000559588 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
IPO4-209ENST00000559588 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
IPO4-209ENST00000559588 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
IPO4-209ENST00000559588 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
IPO4-209ENST00000559588 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
IPO4-209ENST00000559588 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
IPO4-209ENST00000559588 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
IPO4-209ENST00000559588 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
IPO4-209ENST00000559588 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
IPO4-209ENST00000559588 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
IPO4-209ENST00000559588 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
IPO4-209ENST00000559588 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■■□□ 18.5
IPO4-209ENST00000559588 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
IPO4-209ENST00000559588 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
IPO4-209ENST00000559588 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
IPO4-209ENST00000559588 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
IPO4-209ENST00000559588 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
IPO4-209ENST00000559588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
IPO4-209ENST00000559588 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
IPO4-209ENST00000559588 NACADO15069 1562 aa16.15■□□□□ 0.18
IPO4-209ENST00000559588 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
IPO4-209ENST00000559588 BCANQ96GW7 911 aa16.06■□□□□ 0.16
IPO4-209ENST00000559588 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
IPO4-209ENST00000559588 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
IPO4-209ENST00000559588 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
IPO4-209ENST00000559588 MIER1Q8N108 512 aa15.91■□□□□ 0.14
IPO4-209ENST00000559588 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
IPO4-209ENST00000559588 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
IPO4-209ENST00000559588 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
IPO4-209ENST00000559588 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
IPO4-209ENST00000559588 APLP2Q06481 763 aa15.82■□□□□ 0.12
IPO4-209ENST00000559588 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
IPO4-209ENST00000559588 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
IPO4-209ENST00000559588 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
IPO4-209ENST00000559588 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
IPO4-209ENST00000559588 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
IPO4-209ENST00000559588 ITGAEP38570 1179 aa15.65■□□□□ 0.1
IPO4-209ENST00000559588 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
IPO4-209ENST00000559588 NEFLP07196 543 aa15.65■□□□□ 0.1
IPO4-209ENST00000559588 RBM19Q9Y4C8 960 aaKnown RBP15.64■□□□□ 0.09
IPO4-209ENST00000559588 DEKP35659 375 aaKnown RBP15.63■□□□□ 0.09
IPO4-209ENST00000559588 FKBP8Q14318 412 aa15.63■□□□□ 0.09
IPO4-209ENST00000559588 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
IPO4-209ENST00000559588 NBR1Q14596 966 aa15.59■□□□□ 0.09
IPO4-209ENST00000559588 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
IPO4-209ENST00000559588 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
IPO4-209ENST00000559588 WIZO95785 1651 aa15.56■□□□□ 0.08
IPO4-209ENST00000559588 CLSPNQ9HAW4 1339 aa15.5■□□□□ 0.07
IPO4-209ENST00000559588 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
IPO4-209ENST00000559588 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
IPO4-209ENST00000559588 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
IPO4-209ENST00000559588 SMARCA4P51532 1647 aa15.41■□□□□ 0.06
IPO4-209ENST00000559588 MSH5O43196 834 aa15.39■□□□□ 0.05
IPO4-209ENST00000559588 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
IPO4-209ENST00000559588 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
IPO4-209ENST00000559588 MYT1LQ9UL68 1186 aa15.35■□□□□ 0.05
IPO4-209ENST00000559588 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
IPO4-209ENST00000559588 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.05
IPO4-209ENST00000559588 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
IPO4-209ENST00000559588 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
IPO4-209ENST00000559588 PKNOX2Q96KN3 472 aa15.28■□□□□ 0.04
IPO4-209ENST00000559588 CEP162Q5TB80 1403 aa15.27■□□□□ 0.03
IPO4-209ENST00000559588 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
IPO4-209ENST00000559588 SOGA1O94964 1423 aa15.26■□□□□ 0.03
IPO4-209ENST00000559588 IRX6P78412 446 aaPredicted RBP15.26■□□□□ 0.03
IPO4-209ENST00000559588 TOP2AP11388 1531 aaKnown RBP15.26■□□□□ 0.03
IPO4-209ENST00000559588 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
IPO4-209ENST00000559588 TRIM52Q96A61 297 aa15.22■□□□□ 0.03
IPO4-209ENST00000559588 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
IPO4-209ENST00000559588 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
IPO4-209ENST00000559588 KCNH8Q96L42 1107 aa15.19■□□□□ 0.02
IPO4-209ENST00000559588 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
IPO4-209ENST00000559588 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
IPO4-209ENST00000559588 SLC24A1O60721 1099 aa15.18■□□□□ 0.02
IPO4-209ENST00000559588 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
IPO4-209ENST00000559588 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
IPO4-209ENST00000559588 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
IPO4-209ENST00000559588 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
IPO4-209ENST00000559588 NOP58Q9Y2X3 529 aaKnown RBP15.08■□□□□ 0.01
IPO4-209ENST00000559588 GLIPR1L2Q4G1C9 344 aa15.06■□□□□ 0
IPO4-209ENST00000559588 FANCIQ9NVI1 1328 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms