RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
UBR5-201ENST00000220959 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
UBR5-201ENST00000220959 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
UBR5-201ENST00000220959 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
UBR5-201ENST00000220959 APLP2Q06481 763 aa23.4■■□□□ 1.34
UBR5-201ENST00000220959 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
UBR5-201ENST00000220959 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
UBR5-201ENST00000220959 ERICH6Q7L0X2 663 aa23.04■■□□□ 1.28
UBR5-201ENST00000220959 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.26
UBR5-201ENST00000220959 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
UBR5-201ENST00000220959 ATP1B4Q9UN42 357 aaPredicted RBP22.62■■□□□ 1.21
UBR5-201ENST00000220959 MYT1Q01538 1121 aa22.6■■□□□ 1.21
UBR5-201ENST00000220959 PCGF6Q9BYE7 350 aa22.59■■□□□ 1.21
UBR5-201ENST00000220959 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
UBR5-201ENST00000220959 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
UBR5-201ENST00000220959 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
UBR5-201ENST00000220959 NEFLP07196 543 aa22.36■■□□□ 1.17
UBR5-201ENST00000220959 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
UBR5-201ENST00000220959 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
UBR5-201ENST00000220959 TRIM41Q8WV44 630 aa22.1■■□□□ 1.13
UBR5-201ENST00000220959 DAXXQ9UER7 740 aaPredicted RBP22.02■■□□□ 1.12
UBR5-201ENST00000220959 YTHDC1Q96MU7 727 aaKnown RBP22.01■■□□□ 1.11
UBR5-201ENST00000220959 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
UBR5-201ENST00000220959 POLR3GLQ9BT43 218 aa21.82■■□□□ 1.08
UBR5-201ENST00000220959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
UBR5-201ENST00000220959 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
UBR5-201ENST00000220959 SLC4A1APQ9BWU0 796 aaKnown RBP21.61■■□□□ 1.05
UBR5-201ENST00000220959 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
UBR5-201ENST00000220959 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
UBR5-201ENST00000220959 ITGAEP38570 1179 aa21.57■■□□□ 1.04
UBR5-201ENST00000220959 CNGB1Q14028 1251 aaPredicted RBP21.55■■□□□ 1.04
UBR5-201ENST00000220959 CLSPNQ9HAW4 1339 aa21.43■■□□□ 1.02
UBR5-201ENST00000220959 ZNF316A6NFI3 1004 aaPredicted RBP21.42■■□□□ 1.02
UBR5-201ENST00000220959 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
UBR5-201ENST00000220959 RTL5Q5HYW3 569 aaPredicted RBP21.28■■□□□ 1
UBR5-201ENST00000220959 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
UBR5-201ENST00000220959 HRCP23327 699 aa21.09■□□□□ 0.97
UBR5-201ENST00000220959 SLC24A1O60721 1099 aa21■□□□□ 0.95
UBR5-201ENST00000220959 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
UBR5-201ENST00000220959 FAM50AQ14320 339 aaKnown RBP20.94■□□□□ 0.94
UBR5-201ENST00000220959 BCL11AQ9H165 835 aa20.84■□□□□ 0.93
UBR5-201ENST00000220959 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
UBR5-201ENST00000220959 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
UBR5-201ENST00000220959 BCANQ96GW7 911 aa20.79■□□□□ 0.92
UBR5-201ENST00000220959 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
UBR5-201ENST00000220959 NEFMP07197 916 aa20.79■□□□□ 0.92
UBR5-201ENST00000220959 CANXP27824 592 aaKnown RBP20.77■□□□□ 0.91
UBR5-201ENST00000220959 ZNF326Q5BKZ1 582 aaKnown RBP20.73■□□□□ 0.91
UBR5-201ENST00000220959 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
UBR5-201ENST00000220959 ANP32CO43423 234 aa20.69■□□□□ 0.9
UBR5-201ENST00000220959 FBLN2P98095 1184 aa20.56■□□□□ 0.88
UBR5-201ENST00000220959 ANP32BQ92688 251 aaKnown RBP20.44■□□□□ 0.86
UBR5-201ENST00000220959 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
UBR5-201ENST00000220959 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
UBR5-201ENST00000220959 HSP90AA1P07900 732 aaKnown RBP20.37■□□□□ 0.85
UBR5-201ENST00000220959 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
UBR5-201ENST00000220959 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.85
UBR5-201ENST00000220959 STAG3Q9UJ98 1225 aa20.3■□□□□ 0.84
UBR5-201ENST00000220959 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
UBR5-201ENST00000220959 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
UBR5-201ENST00000220959 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
UBR5-201ENST00000220959 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
UBR5-201ENST00000220959 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
UBR5-201ENST00000220959 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
UBR5-201ENST00000220959 EIF5BO60841 1220 aaKnown RBP20.19■□□□□ 0.82
UBR5-201ENST00000220959 P3H3Q8IVL6 736 aa20.17■□□□□ 0.82
UBR5-201ENST00000220959 GLIPR1L2Q4G1C9 344 aa20.14■□□□□ 0.81
UBR5-201ENST00000220959 CDK11BP21127 795 aaKnown RBP20.13■□□□□ 0.81
UBR5-201ENST00000220959 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
UBR5-201ENST00000220959 NPM1P06748 294 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBR5-201ENST00000220959 A0A0G2JS52 829 aa20.01■□□□□ 0.79
UBR5-201ENST00000220959 SALL2Q9Y467 1007 aaPredicted RBP19.99■□□□□ 0.79
UBR5-201ENST00000220959 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.98■□□□□ 0.79
UBR5-201ENST00000220959 ABCC9O60706 1549 aa19.96■□□□□ 0.79
UBR5-201ENST00000220959 FKBP8Q14318 412 aa19.95■□□□□ 0.78
UBR5-201ENST00000220959 FAM9BQ8IZU0 186 aa19.93■□□□□ 0.78
UBR5-201ENST00000220959 TONSLQ96HA7 1378 aa19.92■□□□□ 0.78
UBR5-201ENST00000220959 HNRNPUQ00839 825 aaKnown RBP eCLIP19.92■□□□□ 0.78
UBR5-201ENST00000220959 WDR43Q15061 677 aaKnown RBP eCLIP19.9■□□□□ 0.785e-12■□□□□ 10
UBR5-201ENST00000220959 ARXQ96QS3 562 aa19.89■□□□□ 0.78
UBR5-201ENST00000220959 TMC1Q8TDI8 760 aa19.89■□□□□ 0.78
UBR5-201ENST00000220959 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
UBR5-201ENST00000220959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.771e-6■■□□□ 14.1
UBR5-201ENST00000220959 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
UBR5-201ENST00000220959 CCDC136Q96JN2 1154 aa19.83■□□□□ 0.77
UBR5-201ENST00000220959 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
UBR5-201ENST00000220959 NBR1Q14596 966 aa19.78■□□□□ 0.76
UBR5-201ENST00000220959 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
UBR5-201ENST00000220959 DDX10Q13206 875 aaKnown RBP19.76■□□□□ 0.75
UBR5-201ENST00000220959 NCLP19338 710 aaKnown RBP19.75■□□□□ 0.75
UBR5-201ENST00000220959 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
UBR5-201ENST00000220959 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
UBR5-201ENST00000220959 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
UBR5-201ENST00000220959 TULP1O00294 542 aaPredicted RBP19.68■□□□□ 0.74
UBR5-201ENST00000220959 HAP1P54257 671 aaPredicted RBP19.66■□□□□ 0.74
UBR5-201ENST00000220959 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
UBR5-201ENST00000220959 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
UBR5-201ENST00000220959 TRIM44Q96DX7 344 aaPredicted RBP19.65■□□□□ 0.74
UBR5-201ENST00000220959 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
UBR5-201ENST00000220959 ZRSR1Q15695 479 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms