RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 NISCHQ9Y2I1 1504 aa41.49■■■■■ 4.23
RAB5C-209ENST00000552162 ABCC9O60706 1549 aa37.65■■■■□ 3.62
RAB5C-209ENST00000552162 CCDC180Q9P1Z9 1646 aa37.42■■■■□ 3.58
RAB5C-209ENST00000552162 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
RAB5C-209ENST00000552162 DNAJC5BQ9UF47 199 aa35.53■■■■□ 3.28
RAB5C-209ENST00000552162 NACADO15069 1562 aa35.4■■■■□ 3.26
RAB5C-209ENST00000552162 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
RAB5C-209ENST00000552162 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
RAB5C-209ENST00000552162 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
RAB5C-209ENST00000552162 MYO15BQ96JP2 1530 aa34.81■■■■□ 3.16
RAB5C-209ENST00000552162 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.15
RAB5C-209ENST00000552162 ZCCHC6Q5VYS8 1495 aaKnown RBP34.34■■■■□ 3.09
RAB5C-209ENST00000552162 DCAF1Q9Y4B6 1507 aa34.25■■■■□ 3.07
RAB5C-209ENST00000552162 SHROOM4Q9ULL8 1493 aa34.21■■■■□ 3.07
RAB5C-209ENST00000552162 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
RAB5C-209ENST00000552162 CC2D2AQ9P2K1 1620 aa34.03■■■■□ 3.04
RAB5C-209ENST00000552162 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.03
RAB5C-209ENST00000552162 EIF4G1Q04637 1599 aaKnown RBP33.88■■■■□ 3.01
RAB5C-209ENST00000552162 DNAJC5Q9H3Z4 198 aa32.84■■■□□ 2.85
RAB5C-209ENST00000552162 NCAPD3P42695 1498 aa32.66■■■□□ 2.82
RAB5C-209ENST00000552162 CUX2O14529 1486 aa32.59■■■□□ 2.81
RAB5C-209ENST00000552162 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
RAB5C-209ENST00000552162 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
RAB5C-209ENST00000552162 SMARCA4P51532 1647 aa32.46■■■□□ 2.79
RAB5C-209ENST00000552162 SMARCA2P51531 1590 aa32.45■■■□□ 2.78
RAB5C-209ENST00000552162 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
RAB5C-209ENST00000552162 NESP48681 1621 aa32.26■■■□□ 2.76
RAB5C-209ENST00000552162 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
RAB5C-209ENST00000552162 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
RAB5C-209ENST00000552162 PEG3Q9GZU2 1588 aa32.14■■■□□ 2.74
RAB5C-209ENST00000552162 THOC2Q8NI27 1593 aaKnown RBP32.05■■■□□ 2.72
RAB5C-209ENST00000552162 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
RAB5C-209ENST00000552162 MROH2BQ7Z745 1585 aa31.97■■■□□ 2.71
RAB5C-209ENST00000552162 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
RAB5C-209ENST00000552162 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
RAB5C-209ENST00000552162 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
RAB5C-209ENST00000552162 WIZO95785 1651 aa31.59■■■□□ 2.65
RAB5C-209ENST00000552162 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
RAB5C-209ENST00000552162 WDR62O43379 1518 aa31.52■■■□□ 2.64
RAB5C-209ENST00000552162 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
RAB5C-209ENST00000552162 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
RAB5C-209ENST00000552162 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
RAB5C-209ENST00000552162 CFTRP13569 1480 aa31.24■■■□□ 2.59
RAB5C-209ENST00000552162 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
RAB5C-209ENST00000552162 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
RAB5C-209ENST00000552162 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
RAB5C-209ENST00000552162 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
RAB5C-209ENST00000552162 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
RAB5C-209ENST00000552162 CCDC88BA6NC98 1476 aa30.78■■■□□ 2.52
RAB5C-209ENST00000552162 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
RAB5C-209ENST00000552162 ZNF608Q9ULD9 1512 aaPredicted RBP30.74■■■□□ 2.51
RAB5C-209ENST00000552162 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
RAB5C-209ENST00000552162 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
RAB5C-209ENST00000552162 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
RAB5C-209ENST00000552162 TOPBP1Q92547 1522 aa30.69■■■□□ 2.5
RAB5C-209ENST00000552162 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
RAB5C-209ENST00000552162 ABCC8Q09428 1581 aa30.58■■■□□ 2.49
RAB5C-209ENST00000552162 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
RAB5C-209ENST00000552162 ARHGEF11O15085 1522 aa30.56■■■□□ 2.48
RAB5C-209ENST00000552162 TARBP1Q13395 1621 aaKnown RBP30.47■■■□□ 2.47
RAB5C-209ENST00000552162 CHD1O14646 1710 aa30.44■■■□□ 2.46
RAB5C-209ENST00000552162 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.464e-6■■■■■ 31
RAB5C-209ENST00000552162 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
RAB5C-209ENST00000552162 CYB5RLQ6IPT4 315 aa30.28■■■□□ 2.44
RAB5C-209ENST00000552162 FBLN2P98095 1184 aa30.25■■■□□ 2.43
RAB5C-209ENST00000552162 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
RAB5C-209ENST00000552162 ARAP1Q96P48 1450 aa30.24■■■□□ 2.43
RAB5C-209ENST00000552162 SOGA1O94964 1423 aa30.18■■■□□ 2.42
RAB5C-209ENST00000552162 TDRD9Q8NDG6 1382 aaKnown RBP30.16■■■□□ 2.42
RAB5C-209ENST00000552162 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
RAB5C-209ENST00000552162 FGD5Q6ZNL6 1462 aa30.13■■■□□ 2.41
RAB5C-209ENST00000552162 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
RAB5C-209ENST00000552162 CUX1P39880 1505 aa30.06■■■□□ 2.4
RAB5C-209ENST00000552162 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
RAB5C-209ENST00000552162 TRHP20396 242 aaPredicted RBP30.06■■■□□ 2.4
RAB5C-209ENST00000552162 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
RAB5C-209ENST00000552162 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
RAB5C-209ENST00000552162 GRIN2BQ13224 1484 aa29.98■■■□□ 2.39
RAB5C-209ENST00000552162 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
RAB5C-209ENST00000552162 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
RAB5C-209ENST00000552162 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
RAB5C-209ENST00000552162 GAPVD1Q14C86 1478 aa29.84■■■□□ 2.37
RAB5C-209ENST00000552162 ABCA5Q8WWZ7 1642 aa29.78■■■□□ 2.36
RAB5C-209ENST00000552162 ABCA10Q8WWZ4 1543 aa29.77■■■□□ 2.36
RAB5C-209ENST00000552162 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
RAB5C-209ENST00000552162 ADAMTS12P58397 1594 aa29.59■■■□□ 2.33
RAB5C-209ENST00000552162 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
RAB5C-209ENST00000552162 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
RAB5C-209ENST00000552162 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
RAB5C-209ENST00000552162 CEP170Q5SW79 1584 aa29.54■■■□□ 2.32
RAB5C-209ENST00000552162 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
RAB5C-209ENST00000552162 TOP2BQ02880 1626 aa29.51■■■□□ 2.31
RAB5C-209ENST00000552162 NUP160Q12769 1436 aa29.51■■■□□ 2.31
RAB5C-209ENST00000552162 SHROOM2Q13796 1616 aa29.45■■■□□ 2.31
RAB5C-209ENST00000552162 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
RAB5C-209ENST00000552162 AEBP2Q6ZN18 517 aaPredicted RBP29.4■■■□□ 2.3
RAB5C-209ENST00000552162 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
RAB5C-209ENST00000552162 PRG4Q92954 1404 aaPredicted RBP29.24■■■□□ 2.27
RAB5C-209ENST00000552162 KIF13AQ9H1H9 1805 aa29.23■■■□□ 2.27
RAB5C-209ENST00000552162 RUSC2Q8N2Y8 1516 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms