RNA–Protein interactions for RNA: ENST00000560798.5

IPO4-214, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 3,581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-214ENST00000560798 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
IPO4-214ENST00000560798 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
IPO4-214ENST00000560798 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
IPO4-214ENST00000560798 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
IPO4-214ENST00000560798 PPARGC1BQ86YN6 1023 aaKnown RBP19.89■□□□□ 0.78
IPO4-214ENST00000560798 PCGF6Q9BYE7 350 aa19.89■□□□□ 0.77
IPO4-214ENST00000560798 HRCP23327 699 aa19.85■□□□□ 0.77
IPO4-214ENST00000560798 ABCC9O60706 1549 aa19.62■□□□□ 0.73
IPO4-214ENST00000560798 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.72
IPO4-214ENST00000560798 CCDC180Q9P1Z9 1646 aa19.35■□□□□ 0.69
IPO4-214ENST00000560798 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
IPO4-214ENST00000560798 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
IPO4-214ENST00000560798 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
IPO4-214ENST00000560798 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
IPO4-214ENST00000560798 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
IPO4-214ENST00000560798 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.641e-6■■■□□ 18.5
IPO4-214ENST00000560798 SCRIBQ14160 1630 aa18.95■□□□□ 0.62
IPO4-214ENST00000560798 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
IPO4-214ENST00000560798 MYT1Q01538 1121 aa18.93■□□□□ 0.62
IPO4-214ENST00000560798 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.61
IPO4-214ENST00000560798 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
IPO4-214ENST00000560798 ZEB1P37275 1124 aaPredicted RBP18.58■□□□□ 0.57
IPO4-214ENST00000560798 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
IPO4-214ENST00000560798 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
IPO4-214ENST00000560798 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
IPO4-214ENST00000560798 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
IPO4-214ENST00000560798 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
IPO4-214ENST00000560798 YTHDC1Q96MU7 727 aaKnown RBP18.43■□□□□ 0.54
IPO4-214ENST00000560798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
IPO4-214ENST00000560798 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
IPO4-214ENST00000560798 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
IPO4-214ENST00000560798 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.53
IPO4-214ENST00000560798 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
IPO4-214ENST00000560798 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
IPO4-214ENST00000560798 NACADO15069 1562 aa18.3■□□□□ 0.52
IPO4-214ENST00000560798 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
IPO4-214ENST00000560798 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
IPO4-214ENST00000560798 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
IPO4-214ENST00000560798 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
IPO4-214ENST00000560798 WIZO95785 1651 aa18.03■□□□□ 0.48
IPO4-214ENST00000560798 BCL11AQ9H165 835 aa17.88■□□□□ 0.45
IPO4-214ENST00000560798 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
IPO4-214ENST00000560798 MIER1Q8N108 512 aa17.77■□□□□ 0.44
IPO4-214ENST00000560798 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
IPO4-214ENST00000560798 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
IPO4-214ENST00000560798 ZNF316A6NFI3 1004 aaPredicted RBP17.74■□□□□ 0.43
IPO4-214ENST00000560798 UBTFP17480 764 aaKnown RBP17.72■□□□□ 0.43
IPO4-214ENST00000560798 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
IPO4-214ENST00000560798 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
IPO4-214ENST00000560798 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
IPO4-214ENST00000560798 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
IPO4-214ENST00000560798 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
IPO4-214ENST00000560798 BCANQ96GW7 911 aa17.59■□□□□ 0.41
IPO4-214ENST00000560798 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
IPO4-214ENST00000560798 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
IPO4-214ENST00000560798 SOGA1O94964 1423 aa17.49■□□□□ 0.39
IPO4-214ENST00000560798 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
IPO4-214ENST00000560798 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
IPO4-214ENST00000560798 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
IPO4-214ENST00000560798 RUSC2Q8N2Y8 1516 aa17.45■□□□□ 0.38
IPO4-214ENST00000560798 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
IPO4-214ENST00000560798 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
IPO4-214ENST00000560798 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
IPO4-214ENST00000560798 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
IPO4-214ENST00000560798 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
IPO4-214ENST00000560798 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
IPO4-214ENST00000560798 TSHZ2Q9NRE2 1034 aa17.32■□□□□ 0.36
IPO4-214ENST00000560798 APLP2Q06481 763 aa17.31■□□□□ 0.36
IPO4-214ENST00000560798 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
IPO4-214ENST00000560798 ITGAEP38570 1179 aa17.21■□□□□ 0.35
IPO4-214ENST00000560798 FKBP8Q14318 412 aa17.2■□□□□ 0.34
IPO4-214ENST00000560798 NESP48681 1621 aa17.2■□□□□ 0.34
IPO4-214ENST00000560798 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
IPO4-214ENST00000560798 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
IPO4-214ENST00000560798 ARID3CA6NKF2 412 aa17.16■□□□□ 0.34
IPO4-214ENST00000560798 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
IPO4-214ENST00000560798 ERICH6Q7L0X2 663 aa17.12■□□□□ 0.33
IPO4-214ENST00000560798 NEFLP07196 543 aa17.1■□□□□ 0.33
IPO4-214ENST00000560798 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
IPO4-214ENST00000560798 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
IPO4-214ENST00000560798 FBLN2P98095 1184 aa17.05■□□□□ 0.32
IPO4-214ENST00000560798 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
IPO4-214ENST00000560798 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
IPO4-214ENST00000560798 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
IPO4-214ENST00000560798 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
IPO4-214ENST00000560798 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
IPO4-214ENST00000560798 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
IPO4-214ENST00000560798 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
IPO4-214ENST00000560798 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
IPO4-214ENST00000560798 CUX2O14529 1486 aa16.94■□□□□ 0.3
IPO4-214ENST00000560798 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
IPO4-214ENST00000560798 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
IPO4-214ENST00000560798 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
IPO4-214ENST00000560798 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
IPO4-214ENST00000560798 CUX1P39880 1505 aa16.89■□□□□ 0.29
IPO4-214ENST00000560798 CLIP1P30622 1438 aa16.88■□□□□ 0.29
IPO4-214ENST00000560798 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
IPO4-214ENST00000560798 CFTRP13569 1480 aa16.87■□□□□ 0.29
IPO4-214ENST00000560798 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
IPO4-214ENST00000560798 HMGXB3Q12766 1538 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms