RNA–Protein interactions for RNA: ENST00000547276.5

HNRNPA1-204, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best) BASIC

Gene HNRNPA1, Length 1,539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-204ENST00000547276 NISCHQ9Y2I1 1504 aa19.34■□□□□ 0.69
HNRNPA1-204ENST00000547276 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
HNRNPA1-204ENST00000547276 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
HNRNPA1-204ENST00000547276 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
HNRNPA1-204ENST00000547276 ABCC9O60706 1549 aa16.44■□□□□ 0.22
HNRNPA1-204ENST00000547276 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
HNRNPA1-204ENST00000547276 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
HNRNPA1-204ENST00000547276 DCAF8L2P0C7V8 631 aa16.14■□□□□ 0.18
HNRNPA1-204ENST00000547276 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
HNRNPA1-204ENST00000547276 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
HNRNPA1-204ENST00000547276 NACADO15069 1562 aa15.93■□□□□ 0.14
HNRNPA1-204ENST00000547276 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
HNRNPA1-204ENST00000547276 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
HNRNPA1-204ENST00000547276 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
HNRNPA1-204ENST00000547276 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
HNRNPA1-204ENST00000547276 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
HNRNPA1-204ENST00000547276 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
HNRNPA1-204ENST00000547276 BICRAQ9NZM4 1560 aa15.38■□□□□ 0.05
HNRNPA1-204ENST00000547276 FOXD1Q16676 465 aa15.22■□□□□ 0.03
HNRNPA1-204ENST00000547276 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
HNRNPA1-204ENST00000547276 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
HNRNPA1-204ENST00000547276 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
HNRNPA1-204ENST00000547276 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
HNRNPA1-204ENST00000547276 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
HNRNPA1-204ENST00000547276 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
HNRNPA1-204ENST00000547276 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
HNRNPA1-204ENST00000547276 RSF1Q96T23 1441 aaPredicted RBP14.89□□□□□ -0.03
HNRNPA1-204ENST00000547276 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
HNRNPA1-204ENST00000547276 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
HNRNPA1-204ENST00000547276 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
HNRNPA1-204ENST00000547276 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
HNRNPA1-204ENST00000547276 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
HNRNPA1-204ENST00000547276 WIZO95785 1651 aa14.76□□□□□ -0.05
HNRNPA1-204ENST00000547276 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
HNRNPA1-204ENST00000547276 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
HNRNPA1-204ENST00000547276 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.06
HNRNPA1-204ENST00000547276 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
HNRNPA1-204ENST00000547276 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
HNRNPA1-204ENST00000547276 MSH5O43196 834 aa14.49□□□□□ -0.09
HNRNPA1-204ENST00000547276 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
HNRNPA1-204ENST00000547276 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
HNRNPA1-204ENST00000547276 NESP48681 1621 aa14.31□□□□□ -0.12
HNRNPA1-204ENST00000547276 CFTRP13569 1480 aa14.3□□□□□ -0.12
HNRNPA1-204ENST00000547276 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
HNRNPA1-204ENST00000547276 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
HNRNPA1-204ENST00000547276 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
HNRNPA1-204ENST00000547276 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
HNRNPA1-204ENST00000547276 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
HNRNPA1-204ENST00000547276 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
HNRNPA1-204ENST00000547276 ADRA2BP18089 450 aa14.11□□□□□ -0.15
HNRNPA1-204ENST00000547276 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.15
HNRNPA1-204ENST00000547276 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
HNRNPA1-204ENST00000547276 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
HNRNPA1-204ENST00000547276 WRNQ14191 1432 aaPredicted RBP eCLIP14.03□□□□□ -0.16
HNRNPA1-204ENST00000547276 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
HNRNPA1-204ENST00000547276 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
HNRNPA1-204ENST00000547276 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
HNRNPA1-204ENST00000547276 KCNA4P22459 653 aa13.99□□□□□ -0.17
HNRNPA1-204ENST00000547276 CUX1P39880 1505 aa13.99□□□□□ -0.17
HNRNPA1-204ENST00000547276 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
HNRNPA1-204ENST00000547276 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
HNRNPA1-204ENST00000547276 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
HNRNPA1-204ENST00000547276 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
HNRNPA1-204ENST00000547276 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
HNRNPA1-204ENST00000547276 WDR62O43379 1518 aa13.95□□□□□ -0.18
HNRNPA1-204ENST00000547276 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
HNRNPA1-204ENST00000547276 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
HNRNPA1-204ENST00000547276 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
HNRNPA1-204ENST00000547276 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
HNRNPA1-204ENST00000547276 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
HNRNPA1-204ENST00000547276 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
HNRNPA1-204ENST00000547276 SOGA1O94964 1423 aa13.84□□□□□ -0.19
HNRNPA1-204ENST00000547276 CUX2O14529 1486 aa13.83□□□□□ -0.2
HNRNPA1-204ENST00000547276 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
HNRNPA1-204ENST00000547276 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
HNRNPA1-204ENST00000547276 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
HNRNPA1-204ENST00000547276 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
HNRNPA1-204ENST00000547276 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
HNRNPA1-204ENST00000547276 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
HNRNPA1-204ENST00000547276 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
HNRNPA1-204ENST00000547276 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
HNRNPA1-204ENST00000547276 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.226e-14■■■□□ 19
HNRNPA1-204ENST00000547276 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
HNRNPA1-204ENST00000547276 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
HNRNPA1-204ENST00000547276 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
HNRNPA1-204ENST00000547276 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
HNRNPA1-204ENST00000547276 EEA1Q15075 1411 aa13.64□□□□□ -0.23
HNRNPA1-204ENST00000547276 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
HNRNPA1-204ENST00000547276 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
HNRNPA1-204ENST00000547276 IGF1RP08069 1367 aa13.61□□□□□ -0.23
HNRNPA1-204ENST00000547276 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
HNRNPA1-204ENST00000547276 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
HNRNPA1-204ENST00000547276 PBRM1Q86U86 1689 aa13.57□□□□□ -0.24
HNRNPA1-204ENST00000547276 CARMIL1Q5VZK9 1371 aa13.55□□□□□ -0.24
HNRNPA1-204ENST00000547276 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
HNRNPA1-204ENST00000547276 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
HNRNPA1-204ENST00000547276 FBLN2P98095 1184 aa13.53□□□□□ -0.24
HNRNPA1-204ENST00000547276 ADAMTS12P58397 1594 aa13.52□□□□□ -0.24
HNRNPA1-204ENST00000547276 CUL7Q14999 1698 aa13.52□□□□□ -0.25
HNRNPA1-204ENST00000547276 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms