RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 NISCHQ9Y2I1 1504 aa42.84■■■■■ 4.45
PSMD4-203ENST00000427779 ABCC9O60706 1549 aa38.79■■■■□ 3.8
PSMD4-203ENST00000427779 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
PSMD4-203ENST00000427779 RB1CC1Q8TDY2 1594 aa36.89■■■■□ 3.5
PSMD4-203ENST00000427779 NACADO15069 1562 aa36.57■■■■□ 3.44
PSMD4-203ENST00000427779 DNAJC5BQ9UF47 199 aa36.53■■■■□ 3.44
PSMD4-203ENST00000427779 DCAF8L2P0C7V8 631 aa36.22■■■■□ 3.39
PSMD4-203ENST00000427779 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
PSMD4-203ENST00000427779 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
PSMD4-203ENST00000427779 MYO15BQ96JP2 1530 aa35.98■■■■□ 3.35
PSMD4-203ENST00000427779 BICRAQ9NZM4 1560 aa35.75■■■■□ 3.31
PSMD4-203ENST00000427779 ZCCHC6Q5VYS8 1495 aaKnown RBP35.46■■■■□ 3.27
PSMD4-203ENST00000427779 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
PSMD4-203ENST00000427779 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
PSMD4-203ENST00000427779 SCRIBQ14160 1630 aa35.12■■■■□ 3.21
PSMD4-203ENST00000427779 CC2D2AQ9P2K1 1620 aa35.06■■■■□ 3.2
PSMD4-203ENST00000427779 CECR2Q9BXF3 1484 aa35■■■■□ 3.19
PSMD4-203ENST00000427779 EIF4G1Q04637 1599 aaKnown RBP34.93■■■■□ 3.18
PSMD4-203ENST00000427779 DNAJC5Q9H3Z4 198 aa33.81■■■■□ 3
PSMD4-203ENST00000427779 NCAPD3P42695 1498 aa33.72■■■□□ 2.99
PSMD4-203ENST00000427779 CUX2O14529 1486 aa33.61■■■□□ 2.97
PSMD4-203ENST00000427779 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
PSMD4-203ENST00000427779 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
PSMD4-203ENST00000427779 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
PSMD4-203ENST00000427779 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
PSMD4-203ENST00000427779 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
PSMD4-203ENST00000427779 BAZ1AQ9NRL2 1556 aaPredicted RBP33.31■■■□□ 2.92
PSMD4-203ENST00000427779 BAZ1BQ9UIG0 1483 aaKnown RBP33.26■■■□□ 2.92
PSMD4-203ENST00000427779 NESP48681 1621 aa33.22■■■□□ 2.91
PSMD4-203ENST00000427779 PEG3Q9GZU2 1588 aa33.19■■■□□ 2.9
PSMD4-203ENST00000427779 LAMC3Q9Y6N6 1575 aa33.05■■■□□ 2.88
PSMD4-203ENST00000427779 THOC2Q8NI27 1593 aaKnown RBP33.01■■■□□ 2.88
PSMD4-203ENST00000427779 MROH2BQ7Z745 1585 aa32.97■■■□□ 2.87
PSMD4-203ENST00000427779 KIF21AQ7Z4S6 1674 aa32.87■■■□□ 2.85
PSMD4-203ENST00000427779 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
PSMD4-203ENST00000427779 CADPSQ9ULU8 1353 aa32.67■■■□□ 2.82
PSMD4-203ENST00000427779 WIZO95785 1651 aa32.59■■■□□ 2.81
PSMD4-203ENST00000427779 MRC2Q9UBG0 1479 aa32.57■■■□□ 2.8
PSMD4-203ENST00000427779 WDR62O43379 1518 aa32.51■■■□□ 2.79
PSMD4-203ENST00000427779 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
PSMD4-203ENST00000427779 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
PSMD4-203ENST00000427779 CFTRP13569 1480 aa32.25■■■□□ 2.75
PSMD4-203ENST00000427779 TRIM41Q8WV44 630 aa32.21■■■□□ 2.75
PSMD4-203ENST00000427779 TOP2AP11388 1531 aaKnown RBP32.2■■■□□ 2.74
PSMD4-203ENST00000427779 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
PSMD4-203ENST00000427779 URB2Q14146 1524 aaKnown RBP32.04■■■□□ 2.72
PSMD4-203ENST00000427779 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
PSMD4-203ENST00000427779 OSCARQ8IYS5 282 aa31.98■■■□□ 2.71
PSMD4-203ENST00000427779 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
PSMD4-203ENST00000427779 IFT140Q96RY7 1462 aa31.76■■■□□ 2.67
PSMD4-203ENST00000427779 TOPBP1Q92547 1522 aa31.67■■■□□ 2.66
PSMD4-203ENST00000427779 ZNF608Q9ULD9 1512 aaPredicted RBP31.67■■■□□ 2.66
PSMD4-203ENST00000427779 ABCC8Q09428 1581 aa31.64■■■□□ 2.66
PSMD4-203ENST00000427779 RIMBP3CA6NJZ7 1639 aa31.62■■■□□ 2.65
PSMD4-203ENST00000427779 RIMBP3BA6NNM3 1639 aa31.62■■■□□ 2.65
PSMD4-203ENST00000427779 RIMBP3Q9UFD9 1639 aa31.62■■■□□ 2.65
PSMD4-203ENST00000427779 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
PSMD4-203ENST00000427779 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
PSMD4-203ENST00000427779 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
PSMD4-203ENST00000427779 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
PSMD4-203ENST00000427779 CHD1O14646 1710 aa31.38■■■□□ 2.61
PSMD4-203ENST00000427779 AQRO60306 1485 aaKnown RBP eCLIP31.35■■■□□ 2.61
PSMD4-203ENST00000427779 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
PSMD4-203ENST00000427779 CYB5RLQ6IPT4 315 aa31.22■■■□□ 2.59
PSMD4-203ENST00000427779 FBLN2P98095 1184 aa31.21■■■□□ 2.59
PSMD4-203ENST00000427779 RAD54L2Q9Y4B4 1467 aa31.18■■■□□ 2.58
PSMD4-203ENST00000427779 SOGA1O94964 1423 aa31.17■■■□□ 2.58
PSMD4-203ENST00000427779 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
PSMD4-203ENST00000427779 ARAP1Q96P48 1450 aa31.14■■■□□ 2.57
PSMD4-203ENST00000427779 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
PSMD4-203ENST00000427779 FGD5Q6ZNL6 1462 aa31.09■■■□□ 2.57
PSMD4-203ENST00000427779 SNAPC4Q5SXM2 1469 aa31.06■■■□□ 2.56
PSMD4-203ENST00000427779 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.55
PSMD4-203ENST00000427779 CUX1P39880 1505 aa31■■■□□ 2.55
PSMD4-203ENST00000427779 TRHP20396 242 aaPredicted RBP30.99■■■□□ 2.55
PSMD4-203ENST00000427779 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
PSMD4-203ENST00000427779 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
PSMD4-203ENST00000427779 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
PSMD4-203ENST00000427779 CHMP7Q8WUX9 453 aaPredicted RBP30.96■■■□□ 2.55
PSMD4-203ENST00000427779 SYNJ2O15056 1496 aa30.89■■■□□ 2.54
PSMD4-203ENST00000427779 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
PSMD4-203ENST00000427779 GAPVD1Q14C86 1478 aa30.8■■■□□ 2.52
PSMD4-203ENST00000427779 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
PSMD4-203ENST00000427779 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
PSMD4-203ENST00000427779 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
PSMD4-203ENST00000427779 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
PSMD4-203ENST00000427779 SUPT5HO00267 1087 aaKnown RBP30.54■■■□□ 2.48
PSMD4-203ENST00000427779 ADAMTS12P58397 1594 aa30.53■■■□□ 2.48
PSMD4-203ENST00000427779 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.47
PSMD4-203ENST00000427779 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
PSMD4-203ENST00000427779 NUP160Q12769 1436 aa30.46■■■□□ 2.47
PSMD4-203ENST00000427779 CEP170Q5SW79 1584 aa30.45■■■□□ 2.46
PSMD4-203ENST00000427779 ERCC6L2Q5T890 1561 aa30.43■■■□□ 2.46
PSMD4-203ENST00000427779 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
PSMD4-203ENST00000427779 SHROOM2Q13796 1616 aa30.38■■■□□ 2.45
PSMD4-203ENST00000427779 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
PSMD4-203ENST00000427779 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
PSMD4-203ENST00000427779 PRG4Q92954 1404 aaPredicted RBP30.17■■■□□ 2.42
PSMD4-203ENST00000427779 KIF13AQ9H1H9 1805 aa30.12■■■□□ 2.41
PSMD4-203ENST00000427779 JPH4Q96JJ6 628 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms