RNA–Protein interactions for RNA: ENST00000488005.5

SEM1-210, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2 BASIC

Gene SEM1, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-210ENST00000488005 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
SEM1-210ENST00000488005 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
SEM1-210ENST00000488005 ZCCHC6Q5VYS8 1495 aaKnown RBP18.35■□□□□ 0.53
SEM1-210ENST00000488005 ABCC9O60706 1549 aa18.34■□□□□ 0.53
SEM1-210ENST00000488005 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
SEM1-210ENST00000488005 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
SEM1-210ENST00000488005 DCAF8L2P0C7V8 631 aa18.06■□□□□ 0.48
SEM1-210ENST00000488005 NACADO15069 1562 aa18.01■□□□□ 0.47
SEM1-210ENST00000488005 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
SEM1-210ENST00000488005 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
SEM1-210ENST00000488005 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
SEM1-210ENST00000488005 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
SEM1-210ENST00000488005 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
SEM1-210ENST00000488005 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
SEM1-210ENST00000488005 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
SEM1-210ENST00000488005 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
SEM1-210ENST00000488005 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
SEM1-210ENST00000488005 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
SEM1-210ENST00000488005 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
SEM1-210ENST00000488005 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
SEM1-210ENST00000488005 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
SEM1-210ENST00000488005 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
SEM1-210ENST00000488005 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
SEM1-210ENST00000488005 WIZO95785 1651 aa16.69■□□□□ 0.26
SEM1-210ENST00000488005 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
SEM1-210ENST00000488005 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
SEM1-210ENST00000488005 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
SEM1-210ENST00000488005 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
SEM1-210ENST00000488005 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
SEM1-210ENST00000488005 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
SEM1-210ENST00000488005 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
SEM1-210ENST00000488005 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
SEM1-210ENST00000488005 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
SEM1-210ENST00000488005 CFTRP13569 1480 aa16.16■□□□□ 0.18
SEM1-210ENST00000488005 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
SEM1-210ENST00000488005 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
SEM1-210ENST00000488005 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
SEM1-210ENST00000488005 NESP48681 1621 aa16.01■□□□□ 0.15
SEM1-210ENST00000488005 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
SEM1-210ENST00000488005 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
SEM1-210ENST00000488005 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
SEM1-210ENST00000488005 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
SEM1-210ENST00000488005 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
SEM1-210ENST00000488005 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
SEM1-210ENST00000488005 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
SEM1-210ENST00000488005 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.13
SEM1-210ENST00000488005 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
SEM1-210ENST00000488005 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
SEM1-210ENST00000488005 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
SEM1-210ENST00000488005 CUX1P39880 1505 aa15.79■□□□□ 0.12
SEM1-210ENST00000488005 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
SEM1-210ENST00000488005 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
SEM1-210ENST00000488005 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
SEM1-210ENST00000488005 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
SEM1-210ENST00000488005 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
SEM1-210ENST00000488005 WDR62O43379 1518 aa15.69■□□□□ 0.1
SEM1-210ENST00000488005 THOC2Q8NI27 1593 aaKnown RBP15.68■□□□□ 0.1
SEM1-210ENST00000488005 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
SEM1-210ENST00000488005 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
SEM1-210ENST00000488005 SOGA1O94964 1423 aa15.6■□□□□ 0.09
SEM1-210ENST00000488005 EEA1Q15075 1411 aa15.6■□□□□ 0.09
SEM1-210ENST00000488005 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SEM1-210ENST00000488005 CUX2O14529 1486 aa15.55■□□□□ 0.08
SEM1-210ENST00000488005 RAD54L2Q9Y4B4 1467 aa15.55■□□□□ 0.08
SEM1-210ENST00000488005 IFT140Q96RY7 1462 aa15.54■□□□□ 0.08
SEM1-210ENST00000488005 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
SEM1-210ENST00000488005 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
SEM1-210ENST00000488005 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
SEM1-210ENST00000488005 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
SEM1-210ENST00000488005 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
SEM1-210ENST00000488005 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
SEM1-210ENST00000488005 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
SEM1-210ENST00000488005 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
SEM1-210ENST00000488005 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
SEM1-210ENST00000488005 IGF1RP08069 1367 aa15.4■□□□□ 0.06
SEM1-210ENST00000488005 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
SEM1-210ENST00000488005 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
SEM1-210ENST00000488005 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEM1-210ENST00000488005 GRIN2BQ13224 1484 aa15.36■□□□□ 0.05
SEM1-210ENST00000488005 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
SEM1-210ENST00000488005 KIF21BO75037 1637 aa15.35■□□□□ 0.05
SEM1-210ENST00000488005 PRXQ9BXM0 1461 aa15.35■□□□□ 0.05
SEM1-210ENST00000488005 CUL7Q14999 1698 aa15.34■□□□□ 0.05
SEM1-210ENST00000488005 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
SEM1-210ENST00000488005 CARMIL1Q5VZK9 1371 aa15.34■□□□□ 0.05
SEM1-210ENST00000488005 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
SEM1-210ENST00000488005 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
SEM1-210ENST00000488005 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
SEM1-210ENST00000488005 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
SEM1-210ENST00000488005 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.04
SEM1-210ENST00000488005 ADAMTS12P58397 1594 aa15.25■□□□□ 0.03
SEM1-210ENST00000488005 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
SEM1-210ENST00000488005 TNIKQ9UKE5 1360 aa15.23■□□□□ 0.03
SEM1-210ENST00000488005 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
SEM1-210ENST00000488005 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
SEM1-210ENST00000488005 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
SEM1-210ENST00000488005 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
SEM1-210ENST00000488005 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
SEM1-210ENST00000488005 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
SEM1-210ENST00000488005 NUP160Q12769 1436 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms