RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
RFC4-207ENST00000433496 CCDC180Q9P1Z9 1646 aa21.39■■□□□ 1.01
RFC4-207ENST00000433496 ABCC9O60706 1549 aa21.11■□□□□ 0.97
RFC4-207ENST00000433496 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
RFC4-207ENST00000433496 NACADO15069 1562 aa20.12■□□□□ 0.81
RFC4-207ENST00000433496 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
RFC4-207ENST00000433496 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
RFC4-207ENST00000433496 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
RFC4-207ENST00000433496 ZCCHC6Q5VYS8 1495 aaKnown RBP19.77■□□□□ 0.76
RFC4-207ENST00000433496 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
RFC4-207ENST00000433496 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
RFC4-207ENST00000433496 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
RFC4-207ENST00000433496 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
RFC4-207ENST00000433496 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
RFC4-207ENST00000433496 SHROOM4Q9ULL8 1493 aa19.4■□□□□ 0.7
RFC4-207ENST00000433496 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
RFC4-207ENST00000433496 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
RFC4-207ENST00000433496 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
RFC4-207ENST00000433496 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
RFC4-207ENST00000433496 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
RFC4-207ENST00000433496 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
RFC4-207ENST00000433496 BAZ1AQ9NRL2 1556 aaPredicted RBP18.52■□□□□ 0.56
RFC4-207ENST00000433496 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
RFC4-207ENST00000433496 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
RFC4-207ENST00000433496 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
RFC4-207ENST00000433496 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
RFC4-207ENST00000433496 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
RFC4-207ENST00000433496 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
RFC4-207ENST00000433496 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
RFC4-207ENST00000433496 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
RFC4-207ENST00000433496 NESP48681 1621 aa18.16■□□□□ 0.5
RFC4-207ENST00000433496 WIZO95785 1651 aa18.16■□□□□ 0.5
RFC4-207ENST00000433496 CUX2O14529 1486 aa18.15■□□□□ 0.5
RFC4-207ENST00000433496 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
RFC4-207ENST00000433496 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
RFC4-207ENST00000433496 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
RFC4-207ENST00000433496 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
RFC4-207ENST00000433496 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
RFC4-207ENST00000433496 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
RFC4-207ENST00000433496 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
RFC4-207ENST00000433496 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
RFC4-207ENST00000433496 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
RFC4-207ENST00000433496 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
RFC4-207ENST00000433496 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
RFC4-207ENST00000433496 CFTRP13569 1480 aa17.79■□□□□ 0.44
RFC4-207ENST00000433496 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
RFC4-207ENST00000433496 WDR62O43379 1518 aa17.78■□□□□ 0.44
RFC4-207ENST00000433496 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
RFC4-207ENST00000433496 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
RFC4-207ENST00000433496 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
RFC4-207ENST00000433496 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
RFC4-207ENST00000433496 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
RFC4-207ENST00000433496 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
RFC4-207ENST00000433496 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
RFC4-207ENST00000433496 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
RFC4-207ENST00000433496 EIF4G3O43432 1585 aaKnown RBP17.35■□□□□ 0.37
RFC4-207ENST00000433496 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
RFC4-207ENST00000433496 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
RFC4-207ENST00000433496 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
RFC4-207ENST00000433496 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
RFC4-207ENST00000433496 CUX1P39880 1505 aa17.22■□□□□ 0.35
RFC4-207ENST00000433496 CHD1O14646 1710 aa17.22■□□□□ 0.35
RFC4-207ENST00000433496 SOGA1O94964 1423 aa17.21■□□□□ 0.35
RFC4-207ENST00000433496 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
RFC4-207ENST00000433496 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
RFC4-207ENST00000433496 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
RFC4-207ENST00000433496 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
RFC4-207ENST00000433496 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
RFC4-207ENST00000433496 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
RFC4-207ENST00000433496 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
RFC4-207ENST00000433496 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
RFC4-207ENST00000433496 FBLN2P98095 1184 aa17.11■□□□□ 0.33
RFC4-207ENST00000433496 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
RFC4-207ENST00000433496 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
RFC4-207ENST00000433496 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
RFC4-207ENST00000433496 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
RFC4-207ENST00000433496 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
RFC4-207ENST00000433496 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
RFC4-207ENST00000433496 TOP2BQ02880 1626 aa17.04■□□□□ 0.32
RFC4-207ENST00000433496 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
RFC4-207ENST00000433496 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
RFC4-207ENST00000433496 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
RFC4-207ENST00000433496 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
RFC4-207ENST00000433496 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
RFC4-207ENST00000433496 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
RFC4-207ENST00000433496 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
RFC4-207ENST00000433496 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
RFC4-207ENST00000433496 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
RFC4-207ENST00000433496 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
RFC4-207ENST00000433496 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
RFC4-207ENST00000433496 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
RFC4-207ENST00000433496 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
RFC4-207ENST00000433496 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
RFC4-207ENST00000433496 CEP170Q5SW79 1584 aa16.78■□□□□ 0.28
RFC4-207ENST00000433496 NUP160Q12769 1436 aa16.75■□□□□ 0.27
RFC4-207ENST00000433496 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
RFC4-207ENST00000433496 CUL7Q14999 1698 aa16.71■□□□□ 0.27
RFC4-207ENST00000433496 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
RFC4-207ENST00000433496 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
RFC4-207ENST00000433496 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms