RNA–Protein interactions for RNA: ENST00000561090.5

IPO4-217, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 3,632 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-217ENST00000561090 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.32
IPO4-217ENST00000561090 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
IPO4-217ENST00000561090 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
IPO4-217ENST00000561090 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
IPO4-217ENST00000561090 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
IPO4-217ENST00000561090 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
IPO4-217ENST00000561090 ABCC9O60706 1549 aa19.11■□□□□ 0.65
IPO4-217ENST00000561090 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
IPO4-217ENST00000561090 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
IPO4-217ENST00000561090 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
IPO4-217ENST00000561090 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
IPO4-217ENST00000561090 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
IPO4-217ENST00000561090 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
IPO4-217ENST00000561090 FAM9AQ8IZU1 332 aaPredicted RBP18.48■□□□□ 0.55
IPO4-217ENST00000561090 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
IPO4-217ENST00000561090 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■■■□□ 18.5
IPO4-217ENST00000561090 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
IPO4-217ENST00000561090 NACADO15069 1562 aa18.41■□□□□ 0.54
IPO4-217ENST00000561090 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
IPO4-217ENST00000561090 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
IPO4-217ENST00000561090 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
IPO4-217ENST00000561090 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
IPO4-217ENST00000561090 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
IPO4-217ENST00000561090 WIZO95785 1651 aa18.12■□□□□ 0.49
IPO4-217ENST00000561090 HRCP23327 699 aa18.1■□□□□ 0.49
IPO4-217ENST00000561090 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
IPO4-217ENST00000561090 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
IPO4-217ENST00000561090 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
IPO4-217ENST00000561090 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
IPO4-217ENST00000561090 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.44
IPO4-217ENST00000561090 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
IPO4-217ENST00000561090 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
IPO4-217ENST00000561090 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.42
IPO4-217ENST00000561090 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
IPO4-217ENST00000561090 RANGAP1P46060 587 aaPredicted RBP17.67■□□□□ 0.42
IPO4-217ENST00000561090 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
IPO4-217ENST00000561090 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
IPO4-217ENST00000561090 SOGA1O94964 1423 aa17.56■□□□□ 0.4
IPO4-217ENST00000561090 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.39
IPO4-217ENST00000561090 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
IPO4-217ENST00000561090 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
IPO4-217ENST00000561090 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
IPO4-217ENST00000561090 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
IPO4-217ENST00000561090 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
IPO4-217ENST00000561090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
IPO4-217ENST00000561090 CEP162Q5TB80 1403 aa17.28■□□□□ 0.36
IPO4-217ENST00000561090 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
IPO4-217ENST00000561090 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
IPO4-217ENST00000561090 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
IPO4-217ENST00000561090 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
IPO4-217ENST00000561090 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
IPO4-217ENST00000561090 TNIKQ9UKE5 1360 aa17.17■□□□□ 0.34
IPO4-217ENST00000561090 APLP2Q06481 763 aa17.15■□□□□ 0.34
IPO4-217ENST00000561090 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
IPO4-217ENST00000561090 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
IPO4-217ENST00000561090 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
IPO4-217ENST00000561090 EEA1Q15075 1411 aa17.12■□□□□ 0.33
IPO4-217ENST00000561090 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
IPO4-217ENST00000561090 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.33
IPO4-217ENST00000561090 CLIP1P30622 1438 aa17.06■□□□□ 0.32
IPO4-217ENST00000561090 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
IPO4-217ENST00000561090 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
IPO4-217ENST00000561090 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
IPO4-217ENST00000561090 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
IPO4-217ENST00000561090 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
IPO4-217ENST00000561090 CUX1P39880 1505 aa16.96■□□□□ 0.3
IPO4-217ENST00000561090 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
IPO4-217ENST00000561090 CFTRP13569 1480 aa16.93■□□□□ 0.3
IPO4-217ENST00000561090 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
IPO4-217ENST00000561090 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
IPO4-217ENST00000561090 ITGAEP38570 1179 aa16.92■□□□□ 0.3
IPO4-217ENST00000561090 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
IPO4-217ENST00000561090 CUX2O14529 1486 aa16.88■□□□□ 0.29
IPO4-217ENST00000561090 NESP48681 1621 aa16.88■□□□□ 0.29
IPO4-217ENST00000561090 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
IPO4-217ENST00000561090 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
IPO4-217ENST00000561090 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
IPO4-217ENST00000561090 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
IPO4-217ENST00000561090 KIF21BO75037 1637 aa16.84■□□□□ 0.29
IPO4-217ENST00000561090 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.28
IPO4-217ENST00000561090 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
IPO4-217ENST00000561090 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
IPO4-217ENST00000561090 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
IPO4-217ENST00000561090 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.27
IPO4-217ENST00000561090 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
IPO4-217ENST00000561090 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
IPO4-217ENST00000561090 IGF1RP08069 1367 aa16.75■□□□□ 0.27
IPO4-217ENST00000561090 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
IPO4-217ENST00000561090 CENPBP07199 599 aaPredicted RBP16.73■□□□□ 0.27
IPO4-217ENST00000561090 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
IPO4-217ENST00000561090 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
IPO4-217ENST00000561090 DIEXFQ68CQ4 756 aaKnown RBP16.69■□□□□ 0.26
IPO4-217ENST00000561090 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
IPO4-217ENST00000561090 FAM50AQ14320 339 aaKnown RBP16.63■□□□□ 0.25
IPO4-217ENST00000561090 ERICH3Q5RHP9 1530 aa16.62■□□□□ 0.25
IPO4-217ENST00000561090 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
IPO4-217ENST00000561090 POLA1P09884 1462 aaPredicted RBP16.58■□□□□ 0.25
IPO4-217ENST00000561090 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
IPO4-217ENST00000561090 FHOD3Q2V2M9 1422 aa16.54■□□□□ 0.24
IPO4-217ENST00000561090 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms