RNA–Protein interactions for RNA: ENST00000558780.5

IPO4-207, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 3,540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-207ENST00000558780 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
IPO4-207ENST00000558780 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
IPO4-207ENST00000558780 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
IPO4-207ENST00000558780 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
IPO4-207ENST00000558780 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
IPO4-207ENST00000558780 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.85
IPO4-207ENST00000558780 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
IPO4-207ENST00000558780 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
IPO4-207ENST00000558780 PPARGC1BQ86YN6 1023 aaKnown RBP19.73■□□□□ 0.75
IPO4-207ENST00000558780 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
IPO4-207ENST00000558780 HRCP23327 699 aa19.71■□□□□ 0.75
IPO4-207ENST00000558780 ABCC9O60706 1549 aa19.68■□□□□ 0.74
IPO4-207ENST00000558780 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
IPO4-207ENST00000558780 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
IPO4-207ENST00000558780 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
IPO4-207ENST00000558780 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
IPO4-207ENST00000558780 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.71
IPO4-207ENST00000558780 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
IPO4-207ENST00000558780 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
IPO4-207ENST00000558780 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
IPO4-207ENST00000558780 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.66
IPO4-207ENST00000558780 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
IPO4-207ENST00000558780 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
IPO4-207ENST00000558780 NACADO15069 1562 aa19.04■□□□□ 0.64
IPO4-207ENST00000558780 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■■■□□ 18.5
IPO4-207ENST00000558780 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
IPO4-207ENST00000558780 WIZO95785 1651 aa18.93■□□□□ 0.62
IPO4-207ENST00000558780 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
IPO4-207ENST00000558780 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
IPO4-207ENST00000558780 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
IPO4-207ENST00000558780 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
IPO4-207ENST00000558780 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
IPO4-207ENST00000558780 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
IPO4-207ENST00000558780 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
IPO4-207ENST00000558780 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
IPO4-207ENST00000558780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
IPO4-207ENST00000558780 SOGA1O94964 1423 aa18.48■□□□□ 0.55
IPO4-207ENST00000558780 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
IPO4-207ENST00000558780 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
IPO4-207ENST00000558780 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
IPO4-207ENST00000558780 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
IPO4-207ENST00000558780 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
IPO4-207ENST00000558780 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
IPO4-207ENST00000558780 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
IPO4-207ENST00000558780 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
IPO4-207ENST00000558780 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
IPO4-207ENST00000558780 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.53
IPO4-207ENST00000558780 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
IPO4-207ENST00000558780 ACIN1Q9UKV3 1341 aaKnown RBP18.29■□□□□ 0.52
IPO4-207ENST00000558780 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
IPO4-207ENST00000558780 MYT1Q01538 1121 aa18.26■□□□□ 0.51
IPO4-207ENST00000558780 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
IPO4-207ENST00000558780 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
IPO4-207ENST00000558780 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
IPO4-207ENST00000558780 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
IPO4-207ENST00000558780 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
IPO4-207ENST00000558780 YTHDC1Q96MU7 727 aaKnown RBP18.11■□□□□ 0.49
IPO4-207ENST00000558780 APLP2Q06481 763 aa18.07■□□□□ 0.48
IPO4-207ENST00000558780 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
IPO4-207ENST00000558780 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
IPO4-207ENST00000558780 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
IPO4-207ENST00000558780 EEA1Q15075 1411 aa18■□□□□ 0.47
IPO4-207ENST00000558780 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
IPO4-207ENST00000558780 CLIP1P30622 1438 aa17.98■□□□□ 0.47
IPO4-207ENST00000558780 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
IPO4-207ENST00000558780 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
IPO4-207ENST00000558780 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
IPO4-207ENST00000558780 ITGAEP38570 1179 aa17.86■□□□□ 0.45
IPO4-207ENST00000558780 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
IPO4-207ENST00000558780 KANK4Q5T7N3 995 aaPredicted RBP17.78■□□□□ 0.44
IPO4-207ENST00000558780 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
IPO4-207ENST00000558780 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
IPO4-207ENST00000558780 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
IPO4-207ENST00000558780 KIF21BO75037 1637 aa17.71■□□□□ 0.43
IPO4-207ENST00000558780 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
IPO4-207ENST00000558780 CUX1P39880 1505 aa17.69■□□□□ 0.42
IPO4-207ENST00000558780 ZNF316A6NFI3 1004 aaPredicted RBP17.68■□□□□ 0.42
IPO4-207ENST00000558780 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
IPO4-207ENST00000558780 CUX2O14529 1486 aa17.62■□□□□ 0.41
IPO4-207ENST00000558780 CFTRP13569 1480 aa17.6■□□□□ 0.41
IPO4-207ENST00000558780 PRXQ9BXM0 1461 aa17.59■□□□□ 0.41
IPO4-207ENST00000558780 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
IPO4-207ENST00000558780 HMGXB3Q12766 1538 aa17.58■□□□□ 0.4
IPO4-207ENST00000558780 MIER1Q8N108 512 aa17.56■□□□□ 0.4
IPO4-207ENST00000558780 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
IPO4-207ENST00000558780 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
IPO4-207ENST00000558780 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
IPO4-207ENST00000558780 IGF1RP08069 1367 aa17.52■□□□□ 0.4
IPO4-207ENST00000558780 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
IPO4-207ENST00000558780 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
IPO4-207ENST00000558780 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
IPO4-207ENST00000558780 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
IPO4-207ENST00000558780 NESP48681 1621 aa17.46■□□□□ 0.39
IPO4-207ENST00000558780 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.38
IPO4-207ENST00000558780 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
IPO4-207ENST00000558780 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
IPO4-207ENST00000558780 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
IPO4-207ENST00000558780 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
IPO4-207ENST00000558780 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.38
IPO4-207ENST00000558780 CCNB3Q8WWL7 1395 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms