RNA–Protein interactions for RNA: ENST00000561199.5

IPO4-218, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 3,249 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-218ENST00000561199 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
IPO4-218ENST00000561199 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
IPO4-218ENST00000561199 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
IPO4-218ENST00000561199 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
IPO4-218ENST00000561199 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
IPO4-218ENST00000561199 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
IPO4-218ENST00000561199 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
IPO4-218ENST00000561199 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
IPO4-218ENST00000561199 MYO15BQ96JP2 1530 aa20.17■□□□□ 0.82
IPO4-218ENST00000561199 ABCC9O60706 1549 aa20.05■□□□□ 0.8
IPO4-218ENST00000561199 SCRIBQ14160 1630 aa19.86■□□□□ 0.77
IPO4-218ENST00000561199 LOC105371045A0A1W2PR82 267 aa19.7■□□□□ 0.74
IPO4-218ENST00000561199 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
IPO4-218ENST00000561199 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
IPO4-218ENST00000561199 HRCP23327 699 aa19.62■□□□□ 0.73
IPO4-218ENST00000561199 NACADO15069 1562 aa19.55■□□□□ 0.72
IPO4-218ENST00000561199 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
IPO4-218ENST00000561199 TRIM41Q8WV44 630 aa19.46■□□□□ 0.7
IPO4-218ENST00000561199 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
IPO4-218ENST00000561199 MROH2BQ7Z745 1585 aa19.35■□□□□ 0.69
IPO4-218ENST00000561199 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
IPO4-218ENST00000561199 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.68
IPO4-218ENST00000561199 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
IPO4-218ENST00000561199 WIZO95785 1651 aa19.24■□□□□ 0.67
IPO4-218ENST00000561199 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
IPO4-218ENST00000561199 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.661e-6■■■□□ 18.5
IPO4-218ENST00000561199 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
IPO4-218ENST00000561199 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
IPO4-218ENST00000561199 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
IPO4-218ENST00000561199 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
IPO4-218ENST00000561199 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
IPO4-218ENST00000561199 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
IPO4-218ENST00000561199 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
IPO4-218ENST00000561199 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
IPO4-218ENST00000561199 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
IPO4-218ENST00000561199 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
IPO4-218ENST00000561199 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
IPO4-218ENST00000561199 SOGA1O94964 1423 aa18.67■□□□□ 0.58
IPO4-218ENST00000561199 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
IPO4-218ENST00000561199 CEP162Q5TB80 1403 aa18.58■□□□□ 0.56
IPO4-218ENST00000561199 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
IPO4-218ENST00000561199 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
IPO4-218ENST00000561199 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
IPO4-218ENST00000561199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
IPO4-218ENST00000561199 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.56
IPO4-218ENST00000561199 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
IPO4-218ENST00000561199 EEA1Q15075 1411 aa18.52■□□□□ 0.56
IPO4-218ENST00000561199 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
IPO4-218ENST00000561199 ATAD2BQ9ULI0 1458 aa18.5■□□□□ 0.55
IPO4-218ENST00000561199 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
IPO4-218ENST00000561199 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
IPO4-218ENST00000561199 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
IPO4-218ENST00000561199 MYT1Q01538 1121 aa18.42■□□□□ 0.54
IPO4-218ENST00000561199 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
IPO4-218ENST00000561199 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
IPO4-218ENST00000561199 KIF21BO75037 1637 aa18.26■□□□□ 0.51
IPO4-218ENST00000561199 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
IPO4-218ENST00000561199 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
IPO4-218ENST00000561199 CLIP1P30622 1438 aa18.24■□□□□ 0.51
IPO4-218ENST00000561199 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
IPO4-218ENST00000561199 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
IPO4-218ENST00000561199 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
IPO4-218ENST00000561199 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
IPO4-218ENST00000561199 APLP2Q06481 763 aa18.14■□□□□ 0.49
IPO4-218ENST00000561199 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
IPO4-218ENST00000561199 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
IPO4-218ENST00000561199 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
IPO4-218ENST00000561199 HMGXB3Q12766 1538 aa18.07■□□□□ 0.48
IPO4-218ENST00000561199 CUX1P39880 1505 aa18.01■□□□□ 0.47
IPO4-218ENST00000561199 PRXQ9BXM0 1461 aa17.99■□□□□ 0.47
IPO4-218ENST00000561199 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
IPO4-218ENST00000561199 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
IPO4-218ENST00000561199 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
IPO4-218ENST00000561199 CFTRP13569 1480 aa17.95■□□□□ 0.46
IPO4-218ENST00000561199 KIF27Q86VH2 1401 aa17.95■□□□□ 0.46
IPO4-218ENST00000561199 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
IPO4-218ENST00000561199 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
IPO4-218ENST00000561199 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
IPO4-218ENST00000561199 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
IPO4-218ENST00000561199 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
IPO4-218ENST00000561199 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
IPO4-218ENST00000561199 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
IPO4-218ENST00000561199 PRKCSHP14314 528 aaPredicted RBP17.8■□□□□ 0.44
IPO4-218ENST00000561199 CUX2O14529 1486 aa17.8■□□□□ 0.44
IPO4-218ENST00000561199 NESP48681 1621 aa17.79■□□□□ 0.44
IPO4-218ENST00000561199 ARHGAP35Q9NRY4 1499 aa17.77■□□□□ 0.44
IPO4-218ENST00000561199 IGF1RP08069 1367 aa17.75■□□□□ 0.43
IPO4-218ENST00000561199 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
IPO4-218ENST00000561199 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
IPO4-218ENST00000561199 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
IPO4-218ENST00000561199 DHX57Q6P158 1386 aaKnown RBP17.71■□□□□ 0.43
IPO4-218ENST00000561199 FGD5Q6ZNL6 1462 aa17.71■□□□□ 0.43
IPO4-218ENST00000561199 MIER1Q8N108 512 aa17.71■□□□□ 0.43
IPO4-218ENST00000561199 ITGAEP38570 1179 aa17.7■□□□□ 0.42
IPO4-218ENST00000561199 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
IPO4-218ENST00000561199 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
IPO4-218ENST00000561199 CARMIL1Q5VZK9 1371 aa17.69■□□□□ 0.42
IPO4-218ENST00000561199 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
IPO4-218ENST00000561199 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
IPO4-218ENST00000561199 CLSPNQ9HAW4 1339 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms