RNA–Protein interactions for RNA: ENST00000455029.3

RRBP1-206, Transcript of ribosome binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene RRBP1, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRBP1-206ENST00000455029 NISCHQ9Y2I1 1504 aa26.94■■□□□ 1.9
RRBP1-206ENST00000455029 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
RRBP1-206ENST00000455029 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
RRBP1-206ENST00000455029 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
RRBP1-206ENST00000455029 CCDC180Q9P1Z9 1646 aa22.77■■□□□ 1.24
RRBP1-206ENST00000455029 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
RRBP1-206ENST00000455029 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
RRBP1-206ENST00000455029 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
RRBP1-206ENST00000455029 HRCP23327 699 aa22.17■■□□□ 1.14
RRBP1-206ENST00000455029 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
RRBP1-206ENST00000455029 PCGF6Q9BYE7 350 aa22.01■■□□□ 1.11
RRBP1-206ENST00000455029 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
RRBP1-206ENST00000455029 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
RRBP1-206ENST00000455029 ABCC9O60706 1549 aa21.64■■□□□ 1.05
RRBP1-206ENST00000455029 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
RRBP1-206ENST00000455029 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
RRBP1-206ENST00000455029 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
RRBP1-206ENST00000455029 TRIM41Q8WV44 630 aa21.32■■□□□ 1
RRBP1-206ENST00000455029 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
RRBP1-206ENST00000455029 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
RRBP1-206ENST00000455029 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
RRBP1-206ENST00000455029 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
RRBP1-206ENST00000455029 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
RRBP1-206ENST00000455029 NACADO15069 1562 aa20.99■□□□□ 0.95
RRBP1-206ENST00000455029 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
RRBP1-206ENST00000455029 WIZO95785 1651 aa20.9■□□□□ 0.94
RRBP1-206ENST00000455029 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
RRBP1-206ENST00000455029 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
RRBP1-206ENST00000455029 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
RRBP1-206ENST00000455029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
RRBP1-206ENST00000455029 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
RRBP1-206ENST00000455029 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
RRBP1-206ENST00000455029 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
RRBP1-206ENST00000455029 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
RRBP1-206ENST00000455029 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
RRBP1-206ENST00000455029 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
RRBP1-206ENST00000455029 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
RRBP1-206ENST00000455029 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
RRBP1-206ENST00000455029 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
RRBP1-206ENST00000455029 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
RRBP1-206ENST00000455029 SOGA1O94964 1423 aa20.39■□□□□ 0.85
RRBP1-206ENST00000455029 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
RRBP1-206ENST00000455029 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
RRBP1-206ENST00000455029 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
RRBP1-206ENST00000455029 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
RRBP1-206ENST00000455029 EEA1Q15075 1411 aa20.31■□□□□ 0.84
RRBP1-206ENST00000455029 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
RRBP1-206ENST00000455029 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
RRBP1-206ENST00000455029 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
RRBP1-206ENST00000455029 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.84
RRBP1-206ENST00000455029 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
RRBP1-206ENST00000455029 CENPBP07199 599 aaPredicted RBP20.2■□□□□ 0.82
RRBP1-206ENST00000455029 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
RRBP1-206ENST00000455029 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
RRBP1-206ENST00000455029 ZNF316A6NFI3 1004 aaPredicted RBP20.08■□□□□ 0.81
RRBP1-206ENST00000455029 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.88e-10■■□□□ 11.5
RRBP1-206ENST00000455029 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
RRBP1-206ENST00000455029 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
RRBP1-206ENST00000455029 KIF21BO75037 1637 aa20.04■□□□□ 0.8
RRBP1-206ENST00000455029 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
RRBP1-206ENST00000455029 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
RRBP1-206ENST00000455029 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
RRBP1-206ENST00000455029 CLIP1P30622 1438 aa20■□□□□ 0.79
RRBP1-206ENST00000455029 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
RRBP1-206ENST00000455029 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
RRBP1-206ENST00000455029 APLP2Q06481 763 aa19.91■□□□□ 0.78
RRBP1-206ENST00000455029 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
RRBP1-206ENST00000455029 RAPGEF2Q9Y4G8 1499 aa19.89■□□□□ 0.77
RRBP1-206ENST00000455029 ATAD2BQ9ULI0 1458 aa19.87■□□□□ 0.77
RRBP1-206ENST00000455029 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
RRBP1-206ENST00000455029 MIER1Q8N108 512 aa19.83■□□□□ 0.77
RRBP1-206ENST00000455029 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
RRBP1-206ENST00000455029 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
RRBP1-206ENST00000455029 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
RRBP1-206ENST00000455029 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
RRBP1-206ENST00000455029 PRXQ9BXM0 1461 aa19.62■□□□□ 0.73
RRBP1-206ENST00000455029 CLSPNQ9HAW4 1339 aa19.62■□□□□ 0.73
RRBP1-206ENST00000455029 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
RRBP1-206ENST00000455029 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
RRBP1-206ENST00000455029 MYT1Q01538 1121 aa19.53■□□□□ 0.72
RRBP1-206ENST00000455029 CUX1P39880 1505 aa19.51■□□□□ 0.71
RRBP1-206ENST00000455029 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
RRBP1-206ENST00000455029 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
RRBP1-206ENST00000455029 HMGXB3Q12766 1538 aa19.45■□□□□ 0.7
RRBP1-206ENST00000455029 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
RRBP1-206ENST00000455029 CUX2O14529 1486 aa19.41■□□□□ 0.7
RRBP1-206ENST00000455029 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
RRBP1-206ENST00000455029 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
RRBP1-206ENST00000455029 ITGAEP38570 1179 aa19.4■□□□□ 0.7
RRBP1-206ENST00000455029 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
RRBP1-206ENST00000455029 CFTRP13569 1480 aa19.35■□□□□ 0.69
RRBP1-206ENST00000455029 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
RRBP1-206ENST00000455029 RAB3GAP2Q9H2M9 1393 aa19.29■□□□□ 0.68
RRBP1-206ENST00000455029 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
RRBP1-206ENST00000455029 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
RRBP1-206ENST00000455029 IGF1RP08069 1367 aa19.23■□□□□ 0.67
RRBP1-206ENST00000455029 MAP3K1Q13233 1512 aa19.22■□□□□ 0.67
RRBP1-206ENST00000455029 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
RRBP1-206ENST00000455029 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
RRBP1-206ENST00000455029 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms