RNA–Protein interactions for RNA: ENST00000558046.5

IPO4-203, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 3,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-203ENST00000558046 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
IPO4-203ENST00000558046 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
IPO4-203ENST00000558046 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
IPO4-203ENST00000558046 DCAF8L2P0C7V8 631 aa20.65■□□□□ 0.9
IPO4-203ENST00000558046 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
IPO4-203ENST00000558046 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
IPO4-203ENST00000558046 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
IPO4-203ENST00000558046 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
IPO4-203ENST00000558046 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.74
IPO4-203ENST00000558046 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
IPO4-203ENST00000558046 HRCP23327 699 aa19.63■□□□□ 0.73
IPO4-203ENST00000558046 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
IPO4-203ENST00000558046 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
IPO4-203ENST00000558046 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
IPO4-203ENST00000558046 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
IPO4-203ENST00000558046 TRIM26Q12899 539 aaPredicted RBP19.07■□□□□ 0.64
IPO4-203ENST00000558046 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
IPO4-203ENST00000558046 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
IPO4-203ENST00000558046 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
IPO4-203ENST00000558046 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
IPO4-203ENST00000558046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
IPO4-203ENST00000558046 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
IPO4-203ENST00000558046 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
IPO4-203ENST00000558046 ABCC9O60706 1549 aa18.59■□□□□ 0.57
IPO4-203ENST00000558046 RB1CC1Q8TDY2 1594 aa18.45■□□□□ 0.54
IPO4-203ENST00000558046 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
IPO4-203ENST00000558046 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
IPO4-203ENST00000558046 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
IPO4-203ENST00000558046 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
IPO4-203ENST00000558046 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
IPO4-203ENST00000558046 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
IPO4-203ENST00000558046 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
IPO4-203ENST00000558046 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■■□□ 18.5
IPO4-203ENST00000558046 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
IPO4-203ENST00000558046 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
IPO4-203ENST00000558046 WIZO95785 1651 aa18.1■□□□□ 0.49
IPO4-203ENST00000558046 GTF3C3Q9Y5Q9 886 aa18.1■□□□□ 0.49
IPO4-203ENST00000558046 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
IPO4-203ENST00000558046 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
IPO4-203ENST00000558046 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
IPO4-203ENST00000558046 ABCC8Q09428 1581 aa18.01■□□□□ 0.47
IPO4-203ENST00000558046 APLP2Q06481 763 aa18■□□□□ 0.47
IPO4-203ENST00000558046 SOGA1O94964 1423 aa17.99■□□□□ 0.47
IPO4-203ENST00000558046 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
IPO4-203ENST00000558046 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
IPO4-203ENST00000558046 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
IPO4-203ENST00000558046 NACADO15069 1562 aa17.89■□□□□ 0.45
IPO4-203ENST00000558046 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
IPO4-203ENST00000558046 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
IPO4-203ENST00000558046 ITGAEP38570 1179 aa17.81■□□□□ 0.44
IPO4-203ENST00000558046 MIER1Q8N108 512 aa17.79■□□□□ 0.44
IPO4-203ENST00000558046 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
IPO4-203ENST00000558046 TNIKQ9UKE5 1360 aa17.73■□□□□ 0.43
IPO4-203ENST00000558046 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
IPO4-203ENST00000558046 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
IPO4-203ENST00000558046 CLIP1P30622 1438 aa17.6■□□□□ 0.41
IPO4-203ENST00000558046 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
IPO4-203ENST00000558046 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
IPO4-203ENST00000558046 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
IPO4-203ENST00000558046 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
IPO4-203ENST00000558046 EEA1Q15075 1411 aa17.48■□□□□ 0.39
IPO4-203ENST00000558046 KANK4Q5T7N3 995 aaPredicted RBP17.47■□□□□ 0.39
IPO4-203ENST00000558046 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
IPO4-203ENST00000558046 RAPGEF2Q9Y4G8 1499 aa17.43■□□□□ 0.38
IPO4-203ENST00000558046 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
IPO4-203ENST00000558046 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
IPO4-203ENST00000558046 BCANQ96GW7 911 aa17.38■□□□□ 0.37
IPO4-203ENST00000558046 VPS8Q8N3P4 1428 aa17.36■□□□□ 0.37
IPO4-203ENST00000558046 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
IPO4-203ENST00000558046 FAM50AQ14320 339 aaKnown RBP17.35■□□□□ 0.37
IPO4-203ENST00000558046 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
IPO4-203ENST00000558046 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
IPO4-203ENST00000558046 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
IPO4-203ENST00000558046 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
IPO4-203ENST00000558046 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
IPO4-203ENST00000558046 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
IPO4-203ENST00000558046 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
IPO4-203ENST00000558046 KIF21BO75037 1637 aa17.18■□□□□ 0.34
IPO4-203ENST00000558046 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
IPO4-203ENST00000558046 UNC13AQ9UPW8 1703 aa17.17■□□□□ 0.34
IPO4-203ENST00000558046 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
IPO4-203ENST00000558046 BICRAQ9NZM4 1560 aa17.12■□□□□ 0.33
IPO4-203ENST00000558046 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
IPO4-203ENST00000558046 FKBP8Q14318 412 aa17.09■□□□□ 0.33
IPO4-203ENST00000558046 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
IPO4-203ENST00000558046 ARAP1Q96P48 1450 aa17.07■□□□□ 0.32
IPO4-203ENST00000558046 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
IPO4-203ENST00000558046 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
IPO4-203ENST00000558046 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
IPO4-203ENST00000558046 MYT1Q01538 1121 aa17.01■□□□□ 0.31
IPO4-203ENST00000558046 NEFLP07196 543 aa17.01■□□□□ 0.31
IPO4-203ENST00000558046 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
IPO4-203ENST00000558046 CUX2O14529 1486 aa16.97■□□□□ 0.31
IPO4-203ENST00000558046 ANP32CO43423 234 aa16.94■□□□□ 0.3
IPO4-203ENST00000558046 IRX6P78412 446 aaPredicted RBP16.94■□□□□ 0.3
IPO4-203ENST00000558046 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
IPO4-203ENST00000558046 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
IPO4-203ENST00000558046 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
IPO4-203ENST00000558046 CARMIL1Q5VZK9 1371 aa16.91■□□□□ 0.3
IPO4-203ENST00000558046 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms