Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.352e-8■■□□□ 12.2
U2AF2P26368 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.352e-8■■□□□ 12.2
U2AF2P26368 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -02e-8■■□□□ 12.2
U2AF2P26368 PFDN6-205ENST00000395134 805 ntTSL 28.96□□□□□ -0.982e-8■■□□□ 12.2
U2AF2P26368 FAM169A-206ENST00000514200 751 ntTSL 420.54■□□□□ 0.885e-7■■□□□ 12.2
U2AF2P26368 FAM169A-205ENST00000513277 803 ntTSL 318.68■□□□□ 0.585e-7■■□□□ 12.2
U2AF2P26368 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.691e-8■■□□□ 12.2
U2AF2P26368 FAM169A-202ENST00000506954 571 ntTSL 410.3□□□□□ -0.765e-7■■□□□ 12.2
U2AF2P26368 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.951e-8■■□□□ 12.2
U2AF2P26368 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21e-6■■□□□ 12.2
U2AF2P26368 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC13.48□□□□□ -0.251e-6■■□□□ 12.2
U2AF2P26368 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.57□□□□□ -1.681e-6■■□□□ 12.2
U2AF2P26368 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.027e-8■■□□□ 12.2
U2AF2P26368 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.227e-8■■□□□ 12.2
U2AF2P26368 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.227e-8■■□□□ 12.2
U2AF2P26368 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.387e-8■■□□□ 12.2
U2AF2P26368 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.192e-7■■□□□ 12.2
U2AF2P26368 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.162e-7■■□□□ 12.2
U2AF2P26368 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.24■□□□□ 0.676e-9■■□□□ 12.2
U2AF2P26368 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC13.71□□□□□ -0.216e-9■■□□□ 12.2
U2AF2P26368 ZMIZ1-204ENST00000478357 4252 ntTSL 211.69□□□□□ -0.546e-9■■□□□ 12.2
U2AF2P26368 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.79■■□□□ 1.723e-7■■□□□ 12.2
U2AF2P26368 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.95■■□□□ 1.263e-7■■□□□ 12.2
U2AF2P26368 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.23e-7■■□□□ 12.2
U2AF2P26368 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.79■■□□□ 1.083e-7■■□□□ 12.2
U2AF2P26368 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.973e-7■■□□□ 12.2
U2AF2P26368 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.1■□□□□ 0.973e-7■■□□□ 12.2
U2AF2P26368 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.41■□□□□ 0.863e-7■■□□□ 12.2
U2AF2P26368 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.09■□□□□ 0.813e-7■■□□□ 12.2
U2AF2P26368 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.91■□□□□ 0.783e-7■■□□□ 12.2
U2AF2P26368 MBD1-213ENST00000586118 1012 ntTSL 319.32■□□□□ 0.683e-7■■□□□ 12.2
U2AF2P26368 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.643e-7■■□□□ 12.2
U2AF2P26368 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.623e-7■■□□□ 12.2
U2AF2P26368 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.623e-7■■□□□ 12.2
U2AF2P26368 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.35■□□□□ 0.533e-7■■□□□ 12.2
U2AF2P26368 MBD1-227ENST00000592060 1952 ntTSL 1 (best)18.29■□□□□ 0.523e-7■■□□□ 12.2
U2AF2P26368 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.04■□□□□ 0.483e-7■■□□□ 12.2
U2AF2P26368 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.89■□□□□ 0.453e-7■■□□□ 12.2
U2AF2P26368 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.453e-7■■□□□ 12.2
U2AF2P26368 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.443e-7■■□□□ 12.2
U2AF2P26368 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.71■□□□□ 0.433e-7■■□□□ 12.2
U2AF2P26368 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.423e-7■■□□□ 12.2
U2AF2P26368 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.373e-7■■□□□ 12.2
U2AF2P26368 MBD1-219ENST00000589733 767 ntTSL 217.19■□□□□ 0.343e-7■■□□□ 12.2
U2AF2P26368 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.333e-7■■□□□ 12.2
U2AF2P26368 RINT1-206ENST00000493041 563 ntTSL 516.88■□□□□ 0.294e-8■■□□□ 12.2
U2AF2P26368 RINT1-205ENST00000482041 578 ntTSL 416.53■□□□□ 0.244e-8■■□□□ 12.2
U2AF2P26368 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.153e-7■■□□□ 12.2
U2AF2P26368 RINT1-202ENST00000467392 837 ntTSL 315.58■□□□□ 0.084e-8■■□□□ 12.2
U2AF2P26368 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.084e-8■■□□□ 12.2
U2AF2P26368 RINT1-208ENST00000497979 2627 ntTSL 513.5□□□□□ -0.254e-8■■□□□ 12.2
U2AF2P26368 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.99□□□□□ -1.613e-7■■□□□ 12.2
U2AF2P26368 SEC62-206ENST00000470355 370 ntTSL 33.65□□□□□ -1.833e-7■■□□□ 12.2
U2AF2P26368 UBE3C-204ENST00000469336 655 ntTSL 25.99□□□□□ -1.454e-7■■□□□ 12.2
U2AF2P26368 CCT6A-205ENST00000466572 686 ntTSL 213.26□□□□□ -0.291e-16■■□□□ 12.2
U2AF2P26368 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.186e-7■■□□□ 12.2
U2AF2P26368 ZNF721-202ENST00000505900 664 ntTSL 1 (best)8.01□□□□□ -1.136e-7■■□□□ 12.2
U2AF2P26368 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.88□□□□□ -1.316e-7■■□□□ 12.2
U2AF2P26368 CPSF3-205ENST00000489629 547 ntTSL 31.3□□□□□ -2.23e-7■■□□□ 12.2
U2AF2P26368 LPP-207ENST00000443217 400 ntTSL 315.67■□□□□ 0.14e-10■■□□□ 12.2
U2AF2P26368 LPP-206ENST00000430340 521 ntTSL 312.82□□□□□ -0.364e-10■■□□□ 12.2
U2AF2P26368 LPP-210ENST00000457242 479 ntTSL 27.57□□□□□ -1.24e-10■■□□□ 12.2
U2AF2P26368 BMP2K-207ENST00000515075 602 ntTSL 32.51□□□□□ -2.013e-6■■□□□ 12.2
U2AF2P26368 SEC31A-241ENST00000515749 829 ntTSL 28.69□□□□□ -1.022e-12■■□□□ 12.2
U2AF2P26368 CLASP1-209ENST00000463621 536 ntTSL 45.91□□□□□ -1.461e-8■■□□□ 12.2
U2AF2P26368 SRRT-207ENST00000466432 378 ntTSL 214.54□□□□□ -0.085e-7■■□□□ 12.2
U2AF2P26368 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC14.47□□□□□ -0.097e-7■■□□□ 12.2
U2AF2P26368 TIMM44-206ENST00000598481 587 ntTSL 219.59■□□□□ 0.736e-8■■□□□ 12.2
U2AF2P26368 ITIH3-209ENST00000493136 2179 ntTSL 216.11■□□□□ 0.179e-9■■□□□ 12.2
U2AF2P26368 REPIN1-205ENST00000467980 899 ntTSL 329.91■■■□□ 2.384e-9■■□□□ 12.2
U2AF2P26368 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.88■■■□□ 2.214e-9■■□□□ 12.2
U2AF2P26368 REPIN1-206ENST00000469309 910 ntTSL 227.22■■□□□ 1.954e-9■■□□□ 12.2
U2AF2P26368 REPIN1-215ENST00000495535 672 ntTSL 326.54■■□□□ 1.844e-9■■□□□ 12.2
U2AF2P26368 REPIN1-219ENST00000522266 480 ntTSL 226.54■■□□□ 1.844e-9■■□□□ 12.2
U2AF2P26368 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.614e-9■■□□□ 12.2
U2AF2P26368 REPIN1-213ENST00000488943 1262 ntTSL 522■■□□□ 1.114e-9■■□□□ 12.2
U2AF2P26368 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.114e-9■■□□□ 12.2
U2AF2P26368 REPIN1-207ENST00000473391 1064 ntTSL 221.87■■□□□ 1.094e-9■■□□□ 12.2
U2AF2P26368 REPIN1-208ENST00000475514 1192 ntTSL 521.82■■□□□ 1.084e-9■■□□□ 12.2
U2AF2P26368 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.37■■□□□ 1.014e-9■■□□□ 12.2
U2AF2P26368 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.94e-9■■□□□ 12.2
U2AF2P26368 REPIN1-216ENST00000518462 621 ntTSL 420.39■□□□□ 0.854e-9■■□□□ 12.2
U2AF2P26368 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.51■□□□□ 0.714e-9■■□□□ 12.2
U2AF2P26368 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.44■□□□□ 0.544e-9■■□□□ 12.2
U2AF2P26368 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.534e-9■■□□□ 12.2
U2AF2P26368 REPIN1-218ENST00000519397 583 ntTSL 416.73■□□□□ 0.274e-9■■□□□ 12.2
U2AF2P26368 REPIN1-211ENST00000486714 824 ntTSL 514.35□□□□□ -0.114e-9■■□□□ 12.2
U2AF2P26368 REPIN1-212ENST00000487455 464 ntTSL 410.18□□□□□ -0.784e-9■■□□□ 12.2
U2AF2P26368 ACSL3-209ENST00000535678 560 ntTSL 321.79■■□□□ 1.082e-8■■□□□ 12.2
U2AF2P26368 ACSL3-204ENST00000413316 650 ntTSL 411.83□□□□□ -0.522e-8■■□□□ 12.2
U2AF2P26368 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.9■□□□□ 0.948e-7■■□□□ 12.2
U2AF2P26368 TNRC6A-205ENST00000464539 1853 ntTSL 1 (best)13.86□□□□□ -0.199e-11■■□□□ 12.2
U2AF2P26368 SRRT-206ENST00000460194 575 ntTSL 214.45□□□□□ -0.11e-7■■□□□ 12.2
U2AF2P26368 BUB1B-205ENST00000558715 580 ntTSL 314.33□□□□□ -0.123e-7■■□□□ 12.2
U2AF2P26368 BUB1B-211ENST00000560120 583 ntTSL 314.25□□□□□ -0.133e-7■■□□□ 12.2
U2AF2P26368 BUB1B-207ENST00000559414 526 ntTSL 413.6□□□□□ -0.233e-7■■□□□ 12.2
U2AF2P26368 MORF4L1-211ENST00000558923 625 ntTSL 36.32□□□□□ -1.43e-8■■□□□ 12.2
U2AF2P26368 AC007038.2-201ENST00000608095 740 ntBASIC2.07□□□□□ -2.082e-7■■□□□ 12.2
U2AF2P26368 WDR27-209ENST00000486490 492 ntTSL 513.33□□□□□ -0.286e-9■■□□□ 12.2
U2AF2P26368 ZNF282-202ENST00000470381 733 ntTSL 235.89■■■■□ 3.347e-7■■□□□ 12.2
Retrieved 100 of 36,523 protein–RNA pairs in 137.6 ms