RNA–Protein interactions for RNA: ENST00000444957.3

REPIN1-203, Transcript of replication initiator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene REPIN1, Length 2,969 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-203ENST00000444957 NISCHQ9Y2I1 1504 aa37.79■■■■□ 3.64
REPIN1-203ENST00000444957 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
REPIN1-203ENST00000444957 DCAF8L2P0C7V8 631 aa31.86■■■□□ 2.69
REPIN1-203ENST00000444957 ABCC9O60706 1549 aa31.69■■■□□ 2.66
REPIN1-203ENST00000444957 ZCCHC6Q5VYS8 1495 aaKnown RBP31.67■■■□□ 2.66
REPIN1-203ENST00000444957 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
REPIN1-203ENST00000444957 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
REPIN1-203ENST00000444957 NACADO15069 1562 aa30.66■■■□□ 2.5
REPIN1-203ENST00000444957 MYO15BQ96JP2 1530 aa30.61■■■□□ 2.49
REPIN1-203ENST00000444957 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
REPIN1-203ENST00000444957 RB1CC1Q8TDY2 1594 aa30.51■■■□□ 2.47
REPIN1-203ENST00000444957 PABPN1Q86U42 306 aaKnown RBP eCLIP30.02■■■□□ 2.4
REPIN1-203ENST00000444957 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
REPIN1-203ENST00000444957 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.38
REPIN1-203ENST00000444957 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.34
REPIN1-203ENST00000444957 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
REPIN1-203ENST00000444957 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
REPIN1-203ENST00000444957 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
REPIN1-203ENST00000444957 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
REPIN1-203ENST00000444957 WIZO95785 1651 aa29.09■■■□□ 2.25
REPIN1-203ENST00000444957 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
REPIN1-203ENST00000444957 EIF4G1Q04637 1599 aaKnown RBP28.83■■■□□ 2.21
REPIN1-203ENST00000444957 HRCP23327 699 aa28.72■■■□□ 2.19
REPIN1-203ENST00000444957 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.18
REPIN1-203ENST00000444957 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
REPIN1-203ENST00000444957 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
REPIN1-203ENST00000444957 BAZ1BQ9UIG0 1483 aaKnown RBP28.55■■■□□ 2.16
REPIN1-203ENST00000444957 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
REPIN1-203ENST00000444957 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
REPIN1-203ENST00000444957 PPARGC1BQ86YN6 1023 aaKnown RBP28.47■■■□□ 2.15
REPIN1-203ENST00000444957 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
REPIN1-203ENST00000444957 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
REPIN1-203ENST00000444957 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
REPIN1-203ENST00000444957 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
REPIN1-203ENST00000444957 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
REPIN1-203ENST00000444957 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
REPIN1-203ENST00000444957 TRIM41Q8WV44 630 aa27.98■■■□□ 2.07
REPIN1-203ENST00000444957 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
REPIN1-203ENST00000444957 NESP48681 1621 aa27.78■■■□□ 2.04
REPIN1-203ENST00000444957 CFTRP13569 1480 aa27.75■■■□□ 2.03
REPIN1-203ENST00000444957 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
REPIN1-203ENST00000444957 FAM9AQ8IZU1 332 aaPredicted RBP27.75■■■□□ 2.03
REPIN1-203ENST00000444957 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
REPIN1-203ENST00000444957 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.017e-10■■■■■ 33.4
REPIN1-203ENST00000444957 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
REPIN1-203ENST00000444957 SYNJ1O43426 1573 aa27.54■■■□□ 2
REPIN1-203ENST00000444957 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
REPIN1-203ENST00000444957 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
REPIN1-203ENST00000444957 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
REPIN1-203ENST00000444957 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
REPIN1-203ENST00000444957 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
REPIN1-203ENST00000444957 CUX1P39880 1505 aa27.39■■□□□ 1.98
REPIN1-203ENST00000444957 SOGA1O94964 1423 aa27.39■■□□□ 1.97
REPIN1-203ENST00000444957 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
REPIN1-203ENST00000444957 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
REPIN1-203ENST00000444957 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
REPIN1-203ENST00000444957 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
REPIN1-203ENST00000444957 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
REPIN1-203ENST00000444957 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
REPIN1-203ENST00000444957 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
REPIN1-203ENST00000444957 FGD5Q6ZNL6 1462 aa27.14■■□□□ 1.94
REPIN1-203ENST00000444957 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
REPIN1-203ENST00000444957 ERCC6Q03468 1493 aa27.11■■□□□ 1.93
REPIN1-203ENST00000444957 TRIM26Q12899 539 aaPredicted RBP27.08■■□□□ 1.93
REPIN1-203ENST00000444957 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
REPIN1-203ENST00000444957 RAD54L2Q9Y4B4 1467 aa27.08■■□□□ 1.93
REPIN1-203ENST00000444957 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
REPIN1-203ENST00000444957 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
REPIN1-203ENST00000444957 CUX2O14529 1486 aa26.98■■□□□ 1.91
REPIN1-203ENST00000444957 MRC2Q9UBG0 1479 aa26.95■■□□□ 1.91
REPIN1-203ENST00000444957 EEA1Q15075 1411 aa26.9■■□□□ 1.9
REPIN1-203ENST00000444957 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
REPIN1-203ENST00000444957 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
REPIN1-203ENST00000444957 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
REPIN1-203ENST00000444957 RANGAP1P46060 587 aaPredicted RBP26.82■■□□□ 1.88
REPIN1-203ENST00000444957 RAPGEF2Q9Y4G8 1499 aa26.78■■□□□ 1.88
REPIN1-203ENST00000444957 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
REPIN1-203ENST00000444957 WDR62O43379 1518 aa26.77■■□□□ 1.88
REPIN1-203ENST00000444957 ABCA10Q8WWZ4 1543 aa26.76■■□□□ 1.87
REPIN1-203ENST00000444957 ZEB1P37275 1124 aaPredicted RBP26.76■■□□□ 1.87
REPIN1-203ENST00000444957 IGF1RP08069 1367 aa26.75■■□□□ 1.87
REPIN1-203ENST00000444957 AQRO60306 1485 aaKnown RBP eCLIP26.7■■□□□ 1.862e-10■■■■■ 52.5
REPIN1-203ENST00000444957 GOLGA3Q08378 1498 aa26.7■■□□□ 1.86
REPIN1-203ENST00000444957 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
REPIN1-203ENST00000444957 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
REPIN1-203ENST00000444957 PRXQ9BXM0 1461 aa26.64■■□□□ 1.86
REPIN1-203ENST00000444957 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
REPIN1-203ENST00000444957 KIF21BO75037 1637 aa26.62■■□□□ 1.85
REPIN1-203ENST00000444957 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
REPIN1-203ENST00000444957 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
REPIN1-203ENST00000444957 NEUROD1Q13562 356 aa26.61■■□□□ 1.85
REPIN1-203ENST00000444957 ACIN1Q9UKV3 1341 aaKnown RBP26.57■■□□□ 1.84
REPIN1-203ENST00000444957 TNIKQ9UKE5 1360 aa26.57■■□□□ 1.84
REPIN1-203ENST00000444957 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
REPIN1-203ENST00000444957 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
REPIN1-203ENST00000444957 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
REPIN1-203ENST00000444957 MYT1Q01538 1121 aa26.52■■□□□ 1.84
REPIN1-203ENST00000444957 GTF3C3Q9Y5Q9 886 aa26.49■■□□□ 1.83
REPIN1-203ENST00000444957 ERICH3Q5RHP9 1530 aa26.45■■□□□ 1.82
REPIN1-203ENST00000444957 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms