RNA–Protein interactions for RNA: ENST00000466432.1

SRRT-207, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-207ENST00000466432 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
SRRT-207ENST00000466432 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
SRRT-207ENST00000466432 ABCC9O60706 1549 aa29.76■■■□□ 2.35
SRRT-207ENST00000466432 RB1CC1Q8TDY2 1594 aa28.36■■■□□ 2.13
SRRT-207ENST00000466432 NACADO15069 1562 aa28.18■■■□□ 2.1
SRRT-207ENST00000466432 DNAJC5BQ9UF47 199 aa27.97■■■□□ 2.07
SRRT-207ENST00000466432 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
SRRT-207ENST00000466432 MYO15BQ96JP2 1530 aa27.85■■■□□ 2.05
SRRT-207ENST00000466432 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
SRRT-207ENST00000466432 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
SRRT-207ENST00000466432 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
SRRT-207ENST00000466432 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
SRRT-207ENST00000466432 DCAF1Q9Y4B6 1507 aa27.49■■□□□ 1.99
SRRT-207ENST00000466432 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.95
SRRT-207ENST00000466432 SCRIBQ14160 1630 aa27.14■■□□□ 1.94
SRRT-207ENST00000466432 CC2D2AQ9P2K1 1620 aa26.95■■□□□ 1.91
SRRT-207ENST00000466432 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.9
SRRT-207ENST00000466432 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
SRRT-207ENST00000466432 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
SRRT-207ENST00000466432 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
SRRT-207ENST00000466432 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
SRRT-207ENST00000466432 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
SRRT-207ENST00000466432 SMARCA2P51531 1590 aa25.83■■□□□ 1.73
SRRT-207ENST00000466432 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
SRRT-207ENST00000466432 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
SRRT-207ENST00000466432 CUX2O14529 1486 aa25.67■■□□□ 1.7
SRRT-207ENST00000466432 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
SRRT-207ENST00000466432 MROH2BQ7Z745 1585 aa25.62■■□□□ 1.69
SRRT-207ENST00000466432 DNAJC5Q9H3Z4 198 aa25.62■■□□□ 1.69
SRRT-207ENST00000466432 NESP48681 1621 aa25.62■■□□□ 1.69
SRRT-207ENST00000466432 ERCC6Q03468 1493 aa25.61■■□□□ 1.69
SRRT-207ENST00000466432 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
SRRT-207ENST00000466432 THOC2Q8NI27 1593 aaKnown RBP25.43■■□□□ 1.66
SRRT-207ENST00000466432 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
SRRT-207ENST00000466432 WIZO95785 1651 aa25.31■■□□□ 1.64
SRRT-207ENST00000466432 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.62
SRRT-207ENST00000466432 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
SRRT-207ENST00000466432 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
SRRT-207ENST00000466432 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
SRRT-207ENST00000466432 WDR62O43379 1518 aa25.03■■□□□ 1.6
SRRT-207ENST00000466432 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
SRRT-207ENST00000466432 CFTRP13569 1480 aa24.94■■□□□ 1.58
SRRT-207ENST00000466432 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
SRRT-207ENST00000466432 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
SRRT-207ENST00000466432 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
SRRT-207ENST00000466432 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
SRRT-207ENST00000466432 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
SRRT-207ENST00000466432 TOPBP1Q92547 1522 aa24.46■■□□□ 1.51
SRRT-207ENST00000466432 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
SRRT-207ENST00000466432 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
SRRT-207ENST00000466432 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
SRRT-207ENST00000466432 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
SRRT-207ENST00000466432 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
SRRT-207ENST00000466432 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
SRRT-207ENST00000466432 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.48
SRRT-207ENST00000466432 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
SRRT-207ENST00000466432 RIMBP3CA6NJZ7 1639 aa24.23■■□□□ 1.47
SRRT-207ENST00000466432 RIMBP3BA6NNM3 1639 aa24.23■■□□□ 1.47
SRRT-207ENST00000466432 RIMBP3Q9UFD9 1639 aa24.23■■□□□ 1.47
SRRT-207ENST00000466432 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
SRRT-207ENST00000466432 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.462e-12■■■■□ 20.7
SRRT-207ENST00000466432 CHD1O14646 1710 aa24.15■■□□□ 1.46
SRRT-207ENST00000466432 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
SRRT-207ENST00000466432 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
SRRT-207ENST00000466432 CUX1P39880 1505 aa24.07■■□□□ 1.44
SRRT-207ENST00000466432 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
SRRT-207ENST00000466432 WDR97A6NE52 1622 aa24.03■■□□□ 1.44
SRRT-207ENST00000466432 SOGA1O94964 1423 aa24.03■■□□□ 1.44
SRRT-207ENST00000466432 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
SRRT-207ENST00000466432 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
SRRT-207ENST00000466432 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
SRRT-207ENST00000466432 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
SRRT-207ENST00000466432 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
SRRT-207ENST00000466432 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
SRRT-207ENST00000466432 PBRM1Q86U86 1689 aa23.84■■□□□ 1.41
SRRT-207ENST00000466432 FBLN2P98095 1184 aa23.84■■□□□ 1.41
SRRT-207ENST00000466432 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
SRRT-207ENST00000466432 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
SRRT-207ENST00000466432 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
SRRT-207ENST00000466432 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
SRRT-207ENST00000466432 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
SRRT-207ENST00000466432 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
SRRT-207ENST00000466432 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
SRRT-207ENST00000466432 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
SRRT-207ENST00000466432 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
SRRT-207ENST00000466432 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
SRRT-207ENST00000466432 WRNQ14191 1432 aaPredicted RBP eCLIP23.61■■□□□ 1.37
SRRT-207ENST00000466432 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
SRRT-207ENST00000466432 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
SRRT-207ENST00000466432 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
SRRT-207ENST00000466432 NUP160Q12769 1436 aa23.53■■□□□ 1.36
SRRT-207ENST00000466432 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
SRRT-207ENST00000466432 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
SRRT-207ENST00000466432 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
SRRT-207ENST00000466432 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
SRRT-207ENST00000466432 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
SRRT-207ENST00000466432 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
SRRT-207ENST00000466432 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
SRRT-207ENST00000466432 JPH4Q96JJ6 628 aa23.17■■□□□ 1.3
SRRT-207ENST00000466432 KIF13AQ9H1H9 1805 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms