RNA–Protein interactions for RNA: ENST00000486714.2

REPIN1-211, Transcript of replication initiator 1, humanhuman

TSL 5

Gene REPIN1, Length 824 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-211ENST00000486714 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
REPIN1-211ENST00000486714 ABCC9O60706 1549 aa31.08■■■□□ 2.57
REPIN1-211ENST00000486714 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
REPIN1-211ENST00000486714 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
REPIN1-211ENST00000486714 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
REPIN1-211ENST00000486714 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
REPIN1-211ENST00000486714 NACADO15069 1562 aa28.75■■■□□ 2.19
REPIN1-211ENST00000486714 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
REPIN1-211ENST00000486714 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
REPIN1-211ENST00000486714 DCAF8L2P0C7V8 631 aa28.32■■■□□ 2.12
REPIN1-211ENST00000486714 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
REPIN1-211ENST00000486714 CECR2Q9BXF3 1484 aa28.05■■■□□ 2.08
REPIN1-211ENST00000486714 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
REPIN1-211ENST00000486714 DNAJC5Q9H3Z4 198 aa28.04■■■□□ 2.08
REPIN1-211ENST00000486714 SHROOM4Q9ULL8 1493 aa27.84■■■□□ 2.05
REPIN1-211ENST00000486714 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
REPIN1-211ENST00000486714 SCRIBQ14160 1630 aa27.52■■■□□ 2
REPIN1-211ENST00000486714 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
REPIN1-211ENST00000486714 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
REPIN1-211ENST00000486714 CUX2O14529 1486 aa27.09■■□□□ 1.93
REPIN1-211ENST00000486714 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
REPIN1-211ENST00000486714 NCAPD3P42695 1498 aa26.56■■□□□ 1.84
REPIN1-211ENST00000486714 NESP48681 1621 aa26.5■■□□□ 1.83
REPIN1-211ENST00000486714 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
REPIN1-211ENST00000486714 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
REPIN1-211ENST00000486714 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
REPIN1-211ENST00000486714 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
REPIN1-211ENST00000486714 SMARCA2P51531 1590 aa26.21■■□□□ 1.79
REPIN1-211ENST00000486714 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
REPIN1-211ENST00000486714 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
REPIN1-211ENST00000486714 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
REPIN1-211ENST00000486714 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
REPIN1-211ENST00000486714 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
REPIN1-211ENST00000486714 PDS5BQ9NTI5 1447 aa25.91■■□□□ 1.74
REPIN1-211ENST00000486714 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
REPIN1-211ENST00000486714 WDR62O43379 1518 aa25.81■■□□□ 1.72
REPIN1-211ENST00000486714 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
REPIN1-211ENST00000486714 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
REPIN1-211ENST00000486714 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
REPIN1-211ENST00000486714 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
REPIN1-211ENST00000486714 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
REPIN1-211ENST00000486714 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
REPIN1-211ENST00000486714 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
REPIN1-211ENST00000486714 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
REPIN1-211ENST00000486714 FANCD2Q9BXW9 1451 aa25.43■■□□□ 1.66
REPIN1-211ENST00000486714 ARHGEF11O15085 1522 aa25.35■■□□□ 1.65
REPIN1-211ENST00000486714 WIZO95785 1651 aa25.34■■□□□ 1.65
REPIN1-211ENST00000486714 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
REPIN1-211ENST00000486714 CFTRP13569 1480 aa25.26■■□□□ 1.63
REPIN1-211ENST00000486714 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
REPIN1-211ENST00000486714 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
REPIN1-211ENST00000486714 TRHP20396 242 aaPredicted RBP25.08■■□□□ 1.61
REPIN1-211ENST00000486714 ARAP1Q96P48 1450 aa25.07■■□□□ 1.6
REPIN1-211ENST00000486714 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
REPIN1-211ENST00000486714 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
REPIN1-211ENST00000486714 CHD1O14646 1710 aa24.96■■□□□ 1.59
REPIN1-211ENST00000486714 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
REPIN1-211ENST00000486714 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
REPIN1-211ENST00000486714 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
REPIN1-211ENST00000486714 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
REPIN1-211ENST00000486714 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
REPIN1-211ENST00000486714 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.564e-10■■■■■ 46.8
REPIN1-211ENST00000486714 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
REPIN1-211ENST00000486714 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
REPIN1-211ENST00000486714 FBLN2P98095 1184 aa24.68■■□□□ 1.54
REPIN1-211ENST00000486714 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
REPIN1-211ENST00000486714 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
REPIN1-211ENST00000486714 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.53
REPIN1-211ENST00000486714 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
REPIN1-211ENST00000486714 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
REPIN1-211ENST00000486714 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
REPIN1-211ENST00000486714 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
REPIN1-211ENST00000486714 TDRD9Q8NDG6 1382 aaKnown RBP24.47■■□□□ 1.51
REPIN1-211ENST00000486714 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
REPIN1-211ENST00000486714 SOGA1O94964 1423 aa24.38■■□□□ 1.49
REPIN1-211ENST00000486714 MAGI1Q96QZ7 1491 aaPredicted RBP24.36■■□□□ 1.49
REPIN1-211ENST00000486714 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
REPIN1-211ENST00000486714 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
REPIN1-211ENST00000486714 SYNJ2O15056 1496 aa24.31■■□□□ 1.48
REPIN1-211ENST00000486714 FGD5Q6ZNL6 1462 aa24.29■■□□□ 1.48
REPIN1-211ENST00000486714 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
REPIN1-211ENST00000486714 ERCC6L2Q5T890 1561 aa24.26■■□□□ 1.47
REPIN1-211ENST00000486714 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
REPIN1-211ENST00000486714 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
REPIN1-211ENST00000486714 CUX1P39880 1505 aa24.16■■□□□ 1.46
REPIN1-211ENST00000486714 ILDR1Q86SU0 546 aaPredicted RBP24.09■■□□□ 1.45
REPIN1-211ENST00000486714 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
REPIN1-211ENST00000486714 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
REPIN1-211ENST00000486714 GRIN2AQ12879 1464 aa24■■□□□ 1.43
REPIN1-211ENST00000486714 SHROOM2Q13796 1616 aa23.99■■□□□ 1.43
REPIN1-211ENST00000486714 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
REPIN1-211ENST00000486714 NUP160Q12769 1436 aa23.96■■□□□ 1.43
REPIN1-211ENST00000486714 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
REPIN1-211ENST00000486714 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
REPIN1-211ENST00000486714 ABCC10Q5T3U5 1492 aa23.86■■□□□ 1.41
REPIN1-211ENST00000486714 DIP2BQ9P265 1576 aa23.82■■□□□ 1.4
REPIN1-211ENST00000486714 FAM69CQ0P6D2 419 aa23.81■■□□□ 1.4
REPIN1-211ENST00000486714 KDM6BO15054 1643 aa23.8■■□□□ 1.4
REPIN1-211ENST00000486714 MAPKBP1O60336 1514 aa23.77■■□□□ 1.4
REPIN1-211ENST00000486714 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms