RNA–Protein interactions for RNA: ENST00000256897.8

CCNH-201, Transcript of cyclin H, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNH, Length 1,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-201ENST00000256897 NISCHQ9Y2I1 1504 aa34.19■■■■□ 3.06
CCNH-201ENST00000256897 CCDC180Q9P1Z9 1646 aa30.24■■■□□ 2.43
CCNH-201ENST00000256897 ABCC9O60706 1549 aa29.31■■■□□ 2.28
CCNH-201ENST00000256897 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
CCNH-201ENST00000256897 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
CCNH-201ENST00000256897 NACADO15069 1562 aa28.39■■■□□ 2.14
CCNH-201ENST00000256897 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
CCNH-201ENST00000256897 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
CCNH-201ENST00000256897 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
CCNH-201ENST00000256897 UNC13AQ9UPW8 1703 aa27.63■■■□□ 2.01
CCNH-201ENST00000256897 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
CCNH-201ENST00000256897 PABPN1Q86U42 306 aaKnown RBP eCLIP27.46■■□□□ 1.99
CCNH-201ENST00000256897 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
CCNH-201ENST00000256897 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
CCNH-201ENST00000256897 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
CCNH-201ENST00000256897 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
CCNH-201ENST00000256897 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
CCNH-201ENST00000256897 CC2D2AQ9P2K1 1620 aa26.52■■□□□ 1.84
CCNH-201ENST00000256897 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
CCNH-201ENST00000256897 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
CCNH-201ENST00000256897 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
CCNH-201ENST00000256897 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
CCNH-201ENST00000256897 SMARCA2P51531 1590 aa26.25■■□□□ 1.79
CCNH-201ENST00000256897 NCAPD3P42695 1498 aa26.2■■□□□ 1.79
CCNH-201ENST00000256897 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
CCNH-201ENST00000256897 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
CCNH-201ENST00000256897 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
CCNH-201ENST00000256897 WIZO95785 1651 aa26.06■■□□□ 1.76
CCNH-201ENST00000256897 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
CCNH-201ENST00000256897 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
CCNH-201ENST00000256897 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
CCNH-201ENST00000256897 CCDC88BA6NC98 1476 aa25.52■■□□□ 1.68
CCNH-201ENST00000256897 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
CCNH-201ENST00000256897 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.67
CCNH-201ENST00000256897 NESP48681 1621 aa25.44■■□□□ 1.66
CCNH-201ENST00000256897 CFTRP13569 1480 aa25.36■■□□□ 1.65
CCNH-201ENST00000256897 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
CCNH-201ENST00000256897 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
CCNH-201ENST00000256897 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
CCNH-201ENST00000256897 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
CCNH-201ENST00000256897 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
CCNH-201ENST00000256897 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
CCNH-201ENST00000256897 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
CCNH-201ENST00000256897 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
CCNH-201ENST00000256897 CUX2O14529 1486 aa24.88■■□□□ 1.57
CCNH-201ENST00000256897 WDR62O43379 1518 aa24.88■■□□□ 1.57
CCNH-201ENST00000256897 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
CCNH-201ENST00000256897 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
CCNH-201ENST00000256897 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
CCNH-201ENST00000256897 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
CCNH-201ENST00000256897 CUX1P39880 1505 aa24.69■■□□□ 1.54
CCNH-201ENST00000256897 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
CCNH-201ENST00000256897 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
CCNH-201ENST00000256897 TOP2BQ02880 1626 aa24.58■■□□□ 1.52
CCNH-201ENST00000256897 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.52
CCNH-201ENST00000256897 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
CCNH-201ENST00000256897 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
CCNH-201ENST00000256897 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
CCNH-201ENST00000256897 SOGA1O94964 1423 aa24.52■■□□□ 1.52
CCNH-201ENST00000256897 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
CCNH-201ENST00000256897 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
CCNH-201ENST00000256897 ZNF608Q9ULD9 1512 aaPredicted RBP24.39■■□□□ 1.49
CCNH-201ENST00000256897 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
CCNH-201ENST00000256897 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
CCNH-201ENST00000256897 TDRD9Q8NDG6 1382 aaKnown RBP24.33■■□□□ 1.49
CCNH-201ENST00000256897 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
CCNH-201ENST00000256897 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.481e-6■■□□□ 13.1
CCNH-201ENST00000256897 EIF4G3O43432 1585 aaKnown RBP24.31■■□□□ 1.48
CCNH-201ENST00000256897 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
CCNH-201ENST00000256897 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
CCNH-201ENST00000256897 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
CCNH-201ENST00000256897 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
CCNH-201ENST00000256897 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
CCNH-201ENST00000256897 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
CCNH-201ENST00000256897 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
CCNH-201ENST00000256897 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
CCNH-201ENST00000256897 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
CCNH-201ENST00000256897 FBLN2P98095 1184 aa24.02■■□□□ 1.44
CCNH-201ENST00000256897 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
CCNH-201ENST00000256897 IGF1RP08069 1367 aa24.01■■□□□ 1.43
CCNH-201ENST00000256897 SYNJ2O15056 1496 aa24■■□□□ 1.43
CCNH-201ENST00000256897 RUSC2Q8N2Y8 1516 aa23.98■■□□□ 1.43
CCNH-201ENST00000256897 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
CCNH-201ENST00000256897 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
CCNH-201ENST00000256897 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
CCNH-201ENST00000256897 CHD1O14646 1710 aa23.93■■□□□ 1.42
CCNH-201ENST00000256897 EEA1Q15075 1411 aa23.92■■□□□ 1.42
CCNH-201ENST00000256897 CUL7Q14999 1698 aa23.91■■□□□ 1.42
CCNH-201ENST00000256897 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
CCNH-201ENST00000256897 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
CCNH-201ENST00000256897 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
CCNH-201ENST00000256897 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
CCNH-201ENST00000256897 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
CCNH-201ENST00000256897 RAPGEF2Q9Y4G8 1499 aa23.77■■□□□ 1.4
CCNH-201ENST00000256897 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
CCNH-201ENST00000256897 NUP160Q12769 1436 aa23.75■■□□□ 1.39
CCNH-201ENST00000256897 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
CCNH-201ENST00000256897 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
CCNH-201ENST00000256897 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
CCNH-201ENST00000256897 KIAA0586Q9BVV6 1533 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms