RNA–Protein interactions for RNA: ENST00000413316.1

ACSL3-204, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 4

Gene ACSL3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-204ENST00000413316 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
ACSL3-204ENST00000413316 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
ACSL3-204ENST00000413316 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
ACSL3-204ENST00000413316 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
ACSL3-204ENST00000413316 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
ACSL3-204ENST00000413316 FOXD1Q16676 465 aa22.18■■□□□ 1.14
ACSL3-204ENST00000413316 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
ACSL3-204ENST00000413316 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
ACSL3-204ENST00000413316 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
ACSL3-204ENST00000413316 MSH5O43196 834 aa20.63■□□□□ 0.89
ACSL3-204ENST00000413316 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
ACSL3-204ENST00000413316 ADRA2BP18089 450 aa20.59■□□□□ 0.89
ACSL3-204ENST00000413316 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
ACSL3-204ENST00000413316 ABCC9O60706 1549 aa20.26■□□□□ 0.83
ACSL3-204ENST00000413316 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
ACSL3-204ENST00000413316 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
ACSL3-204ENST00000413316 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
ACSL3-204ENST00000413316 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
ACSL3-204ENST00000413316 NACADO15069 1562 aa19.78■□□□□ 0.76
ACSL3-204ENST00000413316 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
ACSL3-204ENST00000413316 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
ACSL3-204ENST00000413316 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
ACSL3-204ENST00000413316 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
ACSL3-204ENST00000413316 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
ACSL3-204ENST00000413316 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
ACSL3-204ENST00000413316 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
ACSL3-204ENST00000413316 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
ACSL3-204ENST00000413316 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
ACSL3-204ENST00000413316 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
ACSL3-204ENST00000413316 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
ACSL3-204ENST00000413316 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
ACSL3-204ENST00000413316 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
ACSL3-204ENST00000413316 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
ACSL3-204ENST00000413316 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
ACSL3-204ENST00000413316 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
ACSL3-204ENST00000413316 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
ACSL3-204ENST00000413316 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
ACSL3-204ENST00000413316 WIZO95785 1651 aa18.38■□□□□ 0.53
ACSL3-204ENST00000413316 NCAPD3P42695 1498 aa18.33■□□□□ 0.53
ACSL3-204ENST00000413316 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
ACSL3-204ENST00000413316 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
ACSL3-204ENST00000413316 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
ACSL3-204ENST00000413316 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
ACSL3-204ENST00000413316 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
ACSL3-204ENST00000413316 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
ACSL3-204ENST00000413316 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
ACSL3-204ENST00000413316 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
ACSL3-204ENST00000413316 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
ACSL3-204ENST00000413316 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
ACSL3-204ENST00000413316 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
ACSL3-204ENST00000413316 CFTRP13569 1480 aa17.82■□□□□ 0.44
ACSL3-204ENST00000413316 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
ACSL3-204ENST00000413316 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
ACSL3-204ENST00000413316 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
ACSL3-204ENST00000413316 NESP48681 1621 aa17.72■□□□□ 0.43
ACSL3-204ENST00000413316 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
ACSL3-204ENST00000413316 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
ACSL3-204ENST00000413316 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
ACSL3-204ENST00000413316 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
ACSL3-204ENST00000413316 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
ACSL3-204ENST00000413316 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
ACSL3-204ENST00000413316 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
ACSL3-204ENST00000413316 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
ACSL3-204ENST00000413316 CUX1P39880 1505 aa17.43■□□□□ 0.38
ACSL3-204ENST00000413316 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
ACSL3-204ENST00000413316 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
ACSL3-204ENST00000413316 URB2Q14146 1524 aaKnown RBP17.4■□□□□ 0.38
ACSL3-204ENST00000413316 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
ACSL3-204ENST00000413316 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
ACSL3-204ENST00000413316 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
ACSL3-204ENST00000413316 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
ACSL3-204ENST00000413316 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
ACSL3-204ENST00000413316 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
ACSL3-204ENST00000413316 C1QBPQ07021 282 aaKnown RBP17.34■□□□□ 0.37
ACSL3-204ENST00000413316 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
ACSL3-204ENST00000413316 DNMBPQ6XZF7 1577 aa17.33■□□□□ 0.37
ACSL3-204ENST00000413316 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
ACSL3-204ENST00000413316 WDR62O43379 1518 aa17.29■□□□□ 0.36
ACSL3-204ENST00000413316 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
ACSL3-204ENST00000413316 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
ACSL3-204ENST00000413316 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
ACSL3-204ENST00000413316 CUX2O14529 1486 aa17.22■□□□□ 0.35
ACSL3-204ENST00000413316 SOGA1O94964 1423 aa17.19■□□□□ 0.34
ACSL3-204ENST00000413316 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
ACSL3-204ENST00000413316 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
ACSL3-204ENST00000413316 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
ACSL3-204ENST00000413316 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
ACSL3-204ENST00000413316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
ACSL3-204ENST00000413316 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
ACSL3-204ENST00000413316 EEA1Q15075 1411 aa17.05■□□□□ 0.32
ACSL3-204ENST00000413316 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
ACSL3-204ENST00000413316 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
ACSL3-204ENST00000413316 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
ACSL3-204ENST00000413316 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
ACSL3-204ENST00000413316 IGF1RP08069 1367 aa17.03■□□□□ 0.32
ACSL3-204ENST00000413316 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
ACSL3-204ENST00000413316 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
ACSL3-204ENST00000413316 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.314e-6■□□□□ 10.2
ACSL3-204ENST00000413316 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
ACSL3-204ENST00000413316 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms