RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
CDK12-201ENST00000430627 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
CDK12-201ENST00000430627 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
CDK12-201ENST00000430627 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
CDK12-201ENST00000430627 APLP2Q06481 763 aa21.37■■□□□ 1.01
CDK12-201ENST00000430627 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
CDK12-201ENST00000430627 SHROOM4Q9ULL8 1493 aa21.28■■□□□ 1
CDK12-201ENST00000430627 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
CDK12-201ENST00000430627 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
CDK12-201ENST00000430627 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
CDK12-201ENST00000430627 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
CDK12-201ENST00000430627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
CDK12-201ENST00000430627 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
CDK12-201ENST00000430627 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
CDK12-201ENST00000430627 PELP1Q8IZL8 1130 aaKnown RBP20.55■□□□□ 0.88
CDK12-201ENST00000430627 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
CDK12-201ENST00000430627 POLR3GLQ9BT43 218 aa20.19■□□□□ 0.82
CDK12-201ENST00000430627 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
CDK12-201ENST00000430627 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
CDK12-201ENST00000430627 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
CDK12-201ENST00000430627 BCANQ96GW7 911 aa20.04■□□□□ 0.8
CDK12-201ENST00000430627 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
CDK12-201ENST00000430627 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
CDK12-201ENST00000430627 FBLN2P98095 1184 aa19.93■□□□□ 0.78
CDK12-201ENST00000430627 SLC24A1O60721 1099 aa19.91■□□□□ 0.78
CDK12-201ENST00000430627 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
CDK12-201ENST00000430627 ITGAEP38570 1179 aa19.84■□□□□ 0.77
CDK12-201ENST00000430627 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
CDK12-201ENST00000430627 ESF1Q9H501 851 aaKnown RBP19.67■□□□□ 0.74
CDK12-201ENST00000430627 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
CDK12-201ENST00000430627 A0A0G2JS52 829 aa19.53■□□□□ 0.72
CDK12-201ENST00000430627 NEFLP07196 543 aa19.52■□□□□ 0.72
CDK12-201ENST00000430627 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
CDK12-201ENST00000430627 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
CDK12-201ENST00000430627 DAXXQ9UER7 740 aaPredicted RBP19.47■□□□□ 0.71
CDK12-201ENST00000430627 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
CDK12-201ENST00000430627 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
CDK12-201ENST00000430627 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
CDK12-201ENST00000430627 ARID3CA6NKF2 412 aa19.3■□□□□ 0.68
CDK12-201ENST00000430627 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
CDK12-201ENST00000430627 TRIM52Q96A61 297 aa19.28■□□□□ 0.68
CDK12-201ENST00000430627 PLEKHG5O94827 1062 aa19.27■□□□□ 0.68
CDK12-201ENST00000430627 CLSPNQ9HAW4 1339 aa19.24■□□□□ 0.67
CDK12-201ENST00000430627 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
CDK12-201ENST00000430627 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
CDK12-201ENST00000430627 ZBTB47Q9UFB7 747 aaPredicted RBP19.19■□□□□ 0.66
CDK12-201ENST00000430627 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
CDK12-201ENST00000430627 ABCC9O60706 1549 aa19.16■□□□□ 0.66
CDK12-201ENST00000430627 MYT1Q01538 1121 aa19.16■□□□□ 0.66
CDK12-201ENST00000430627 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
CDK12-201ENST00000430627 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
CDK12-201ENST00000430627 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
CDK12-201ENST00000430627 NEFMP07197 916 aa19.08■□□□□ 0.64
CDK12-201ENST00000430627 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
CDK12-201ENST00000430627 ZNF777Q9ULD5 760 aaPredicted RBP19.03■□□□□ 0.64
CDK12-201ENST00000430627 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
CDK12-201ENST00000430627 HAP1P54257 671 aaPredicted RBP19.02■□□□□ 0.64
CDK12-201ENST00000430627 ARID4BQ4LE39 1312 aaPredicted RBP18.94■□□□□ 0.62
CDK12-201ENST00000430627 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
CDK12-201ENST00000430627 AEBP2Q6ZN18 517 aaPredicted RBP18.89■□□□□ 0.62
CDK12-201ENST00000430627 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
CDK12-201ENST00000430627 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
CDK12-201ENST00000430627 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
CDK12-201ENST00000430627 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
CDK12-201ENST00000430627 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.59
CDK12-201ENST00000430627 ARXQ96QS3 562 aa18.73■□□□□ 0.59
CDK12-201ENST00000430627 NPHP1O15259 732 aa18.7■□□□□ 0.58
CDK12-201ENST00000430627 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
CDK12-201ENST00000430627 TULP1O00294 542 aaPredicted RBP18.62■□□□□ 0.57
CDK12-201ENST00000430627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.575e-7■■□□□ 12.2
CDK12-201ENST00000430627 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
CDK12-201ENST00000430627 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
CDK12-201ENST00000430627 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
CDK12-201ENST00000430627 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
CDK12-201ENST00000430627 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
CDK12-201ENST00000430627 CDK11BP21127 795 aaKnown RBP18.42■□□□□ 0.54
CDK12-201ENST00000430627 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
CDK12-201ENST00000430627 MLECQ14165 292 aa18.3■□□□□ 0.52
CDK12-201ENST00000430627 CCDC9Q9Y3X0 531 aaKnown RBP18.3■□□□□ 0.52
CDK12-201ENST00000430627 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
CDK12-201ENST00000430627 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
CDK12-201ENST00000430627 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
CDK12-201ENST00000430627 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
CDK12-201ENST00000430627 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.15■□□□□ 0.5
CDK12-201ENST00000430627 ANP32CO43423 234 aa18.13■□□□□ 0.49
CDK12-201ENST00000430627 HSP90AA1P07900 732 aaKnown RBP18.13■□□□□ 0.49
CDK12-201ENST00000430627 TAOK2Q9UL54 1235 aa18.11■□□□□ 0.49
CDK12-201ENST00000430627 CLSTN1O94985 981 aa18.1■□□□□ 0.49
CDK12-201ENST00000430627 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
CDK12-201ENST00000430627 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
CDK12-201ENST00000430627 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
CDK12-201ENST00000430627 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
CDK12-201ENST00000430627 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
CDK12-201ENST00000430627 SALL2Q9Y467 1007 aaPredicted RBP18.07■□□□□ 0.48
CDK12-201ENST00000430627 HRCP23327 699 aa18.06■□□□□ 0.48
CDK12-201ENST00000430627 TSPY4P0CV99 314 aa18.06■□□□□ 0.48
CDK12-201ENST00000430627 TSPY10P0CW01 314 aa18.06■□□□□ 0.48
CDK12-201ENST00000430627 MEX3CQ5U5Q3 659 aaKnown RBP18.04■□□□□ 0.48
CDK12-201ENST00000430627 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
CDK12-201ENST00000430627 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms