RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 NISCHQ9Y2I1 1504 aa27.78■■■□□ 2.04
MBD1-201ENST00000269468 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
MBD1-201ENST00000269468 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
MBD1-201ENST00000269468 HRCP23327 699 aa24.2■■□□□ 1.47
MBD1-201ENST00000269468 PCGF6Q9BYE7 350 aa24.02■■□□□ 1.44
MBD1-201ENST00000269468 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
MBD1-201ENST00000269468 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
MBD1-201ENST00000269468 PPARGC1BQ86YN6 1023 aaKnown RBP23.9■■□□□ 1.42
MBD1-201ENST00000269468 DCAF8L2P0C7V8 631 aa23.64■■□□□ 1.37
MBD1-201ENST00000269468 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
MBD1-201ENST00000269468 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
MBD1-201ENST00000269468 DCAF1Q9Y4B6 1507 aa23.24■■□□□ 1.31
MBD1-201ENST00000269468 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
MBD1-201ENST00000269468 CCDC180Q9P1Z9 1646 aa23.06■■□□□ 1.28
MBD1-201ENST00000269468 ZEB1P37275 1124 aaPredicted RBP22.83■■□□□ 1.25
MBD1-201ENST00000269468 PELP1Q8IZL8 1130 aaKnown RBP22.83■■□□□ 1.24
MBD1-201ENST00000269468 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
MBD1-201ENST00000269468 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
MBD1-201ENST00000269468 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
MBD1-201ENST00000269468 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
MBD1-201ENST00000269468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
MBD1-201ENST00000269468 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
MBD1-201ENST00000269468 ABCC9O60706 1549 aa22.33■■□□□ 1.17
MBD1-201ENST00000269468 NEUROD1Q13562 356 aa22.31■■□□□ 1.16
MBD1-201ENST00000269468 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
MBD1-201ENST00000269468 ACIN1Q9UKV3 1341 aaKnown RBP22.3■■□□□ 1.16
MBD1-201ENST00000269468 RB1CC1Q8TDY2 1594 aa22.23■■□□□ 1.15
MBD1-201ENST00000269468 GTF3C3Q9Y5Q9 886 aa22.19■■□□□ 1.14
MBD1-201ENST00000269468 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
MBD1-201ENST00000269468 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
MBD1-201ENST00000269468 DIEXFQ68CQ4 756 aaKnown RBP22.14■■□□□ 1.13
MBD1-201ENST00000269468 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
MBD1-201ENST00000269468 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
MBD1-201ENST00000269468 CECR2Q9BXF3 1484 aa21.85■■□□□ 1.09
MBD1-201ENST00000269468 MYT1Q01538 1121 aa21.79■■□□□ 1.08
MBD1-201ENST00000269468 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
MBD1-201ENST00000269468 ZNF316A6NFI3 1004 aaPredicted RBP21.73■■□□□ 1.07
MBD1-201ENST00000269468 WIZO95785 1651 aa21.69■■□□□ 1.06
MBD1-201ENST00000269468 MIER1Q8N108 512 aa21.61■■□□□ 1.05
MBD1-201ENST00000269468 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
MBD1-201ENST00000269468 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
MBD1-201ENST00000269468 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
MBD1-201ENST00000269468 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
MBD1-201ENST00000269468 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
MBD1-201ENST00000269468 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
MBD1-201ENST00000269468 SOGA1O94964 1423 aa21.47■■□□□ 1.03
MBD1-201ENST00000269468 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
MBD1-201ENST00000269468 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
MBD1-201ENST00000269468 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
MBD1-201ENST00000269468 EIF4G1Q04637 1599 aaKnown RBP21.38■■□□□ 1.01
MBD1-201ENST00000269468 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
MBD1-201ENST00000269468 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
MBD1-201ENST00000269468 NACADO15069 1562 aa21.3■■□□□ 1
MBD1-201ENST00000269468 APLP2Q06481 763 aa21.21■□□□□ 0.99
MBD1-201ENST00000269468 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
MBD1-201ENST00000269468 TOP2AP11388 1531 aaKnown RBP21.17■□□□□ 0.98
MBD1-201ENST00000269468 EEA1Q15075 1411 aa21.14■□□□□ 0.98
MBD1-201ENST00000269468 SMARCA2P51531 1590 aa21.14■□□□□ 0.97
MBD1-201ENST00000269468 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
MBD1-201ENST00000269468 CLIP1P30622 1438 aa21.08■□□□□ 0.96
MBD1-201ENST00000269468 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
MBD1-201ENST00000269468 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
MBD1-201ENST00000269468 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
MBD1-201ENST00000269468 TSHZ2Q9NRE2 1034 aa20.95■□□□□ 0.94
MBD1-201ENST00000269468 BCANQ96GW7 911 aa20.92■□□□□ 0.94
MBD1-201ENST00000269468 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
MBD1-201ENST00000269468 DHX57Q6P158 1386 aaKnown RBP20.89■□□□□ 0.93
MBD1-201ENST00000269468 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
MBD1-201ENST00000269468 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
MBD1-201ENST00000269468 ITGAEP38570 1179 aa20.86■□□□□ 0.93
MBD1-201ENST00000269468 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
MBD1-201ENST00000269468 ANP32EQ9BTT0 268 aa20.84■□□□□ 0.93
MBD1-201ENST00000269468 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
MBD1-201ENST00000269468 KIF21BO75037 1637 aa20.81■□□□□ 0.92
MBD1-201ENST00000269468 KANK4Q5T7N3 995 aaPredicted RBP20.8■□□□□ 0.92
MBD1-201ENST00000269468 FKBP8Q14318 412 aa20.72■□□□□ 0.91
MBD1-201ENST00000269468 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
MBD1-201ENST00000269468 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
MBD1-201ENST00000269468 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
MBD1-201ENST00000269468 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
MBD1-201ENST00000269468 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
MBD1-201ENST00000269468 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
MBD1-201ENST00000269468 NEFLP07196 543 aa20.56■□□□□ 0.88
MBD1-201ENST00000269468 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
MBD1-201ENST00000269468 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
MBD1-201ENST00000269468 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
MBD1-201ENST00000269468 RBM19Q9Y4C8 960 aaKnown RBP20.51■□□□□ 0.87
MBD1-201ENST00000269468 RRBP1Q9P2E9 1410 aaKnown RBP20.5■□□□□ 0.87
MBD1-201ENST00000269468 RAB3GAP2Q9H2M9 1393 aa20.49■□□□□ 0.87
MBD1-201ENST00000269468 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
MBD1-201ENST00000269468 PRXQ9BXM0 1461 aa20.41■□□□□ 0.86
MBD1-201ENST00000269468 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
MBD1-201ENST00000269468 TOP2BQ02880 1626 aa20.39■□□□□ 0.85
MBD1-201ENST00000269468 MAPKBP1O60336 1514 aa20.37■□□□□ 0.85
MBD1-201ENST00000269468 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
MBD1-201ENST00000269468 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
MBD1-201ENST00000269468 CUX2O14529 1486 aa20.37■□□□□ 0.85
MBD1-201ENST00000269468 ANP32CO43423 234 aa20.37■□□□□ 0.85
MBD1-201ENST00000269468 ERICH3Q5RHP9 1530 aa20.36■□□□□ 0.85
MBD1-201ENST00000269468 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms