RNA–Protein interactions for RNA: ENST00000397281.6

REPIN1-201, Transcript of replication initiator 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene REPIN1, Length 3,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-201ENST00000397281 NISCHQ9Y2I1 1504 aa31.33■■■□□ 2.61
REPIN1-201ENST00000397281 SHROOM4Q9ULL8 1493 aa27.11■■□□□ 1.93
REPIN1-201ENST00000397281 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
REPIN1-201ENST00000397281 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
REPIN1-201ENST00000397281 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
REPIN1-201ENST00000397281 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.79
REPIN1-201ENST00000397281 ABCC9O60706 1549 aa26.1■■□□□ 1.77
REPIN1-201ENST00000397281 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
REPIN1-201ENST00000397281 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
REPIN1-201ENST00000397281 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
REPIN1-201ENST00000397281 HRCP23327 699 aa25.73■■□□□ 1.71
REPIN1-201ENST00000397281 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
REPIN1-201ENST00000397281 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
REPIN1-201ENST00000397281 LOC105371045A0A1W2PR82 267 aa25.4■■□□□ 1.66
REPIN1-201ENST00000397281 SCRIBQ14160 1630 aa25.38■■□□□ 1.65
REPIN1-201ENST00000397281 NACADO15069 1562 aa25.08■■□□□ 1.61
REPIN1-201ENST00000397281 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
REPIN1-201ENST00000397281 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
REPIN1-201ENST00000397281 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
REPIN1-201ENST00000397281 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
REPIN1-201ENST00000397281 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
REPIN1-201ENST00000397281 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
REPIN1-201ENST00000397281 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
REPIN1-201ENST00000397281 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
REPIN1-201ENST00000397281 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
REPIN1-201ENST00000397281 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
REPIN1-201ENST00000397281 ZEB1P37275 1124 aaPredicted RBP24.38■■□□□ 1.49
REPIN1-201ENST00000397281 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
REPIN1-201ENST00000397281 WIZO95785 1651 aa24.24■■□□□ 1.47
REPIN1-201ENST00000397281 TTBK1Q5TCY1 1321 aaPredicted RBP24.13■■□□□ 1.45
REPIN1-201ENST00000397281 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
REPIN1-201ENST00000397281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.09■■□□□ 1.45
REPIN1-201ENST00000397281 SCAF1Q9H7N4 1312 aaKnown RBP24.06■■□□□ 1.44
REPIN1-201ENST00000397281 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
REPIN1-201ENST00000397281 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
REPIN1-201ENST00000397281 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
REPIN1-201ENST00000397281 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
REPIN1-201ENST00000397281 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
REPIN1-201ENST00000397281 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
REPIN1-201ENST00000397281 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
REPIN1-201ENST00000397281 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
REPIN1-201ENST00000397281 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.37
REPIN1-201ENST00000397281 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
REPIN1-201ENST00000397281 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
REPIN1-201ENST00000397281 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
REPIN1-201ENST00000397281 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
REPIN1-201ENST00000397281 SMARCA2P51531 1590 aa23.59■■□□□ 1.37
REPIN1-201ENST00000397281 GTF3C3Q9Y5Q9 886 aa23.51■■□□□ 1.35
REPIN1-201ENST00000397281 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
REPIN1-201ENST00000397281 SOGA1O94964 1423 aa23.51■■□□□ 1.35
REPIN1-201ENST00000397281 CENPBP07199 599 aaPredicted RBP23.46■■□□□ 1.35
REPIN1-201ENST00000397281 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
REPIN1-201ENST00000397281 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
REPIN1-201ENST00000397281 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.34
REPIN1-201ENST00000397281 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
REPIN1-201ENST00000397281 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
REPIN1-201ENST00000397281 RANGAP1P46060 587 aaPredicted RBP23.36■■□□□ 1.33
REPIN1-201ENST00000397281 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.337e-10■■■■■ 33.4
REPIN1-201ENST00000397281 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.32
REPIN1-201ENST00000397281 TNIKQ9UKE5 1360 aa23.32■■□□□ 1.32
REPIN1-201ENST00000397281 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
REPIN1-201ENST00000397281 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
REPIN1-201ENST00000397281 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
REPIN1-201ENST00000397281 GOLGA3Q08378 1498 aa23.14■■□□□ 1.29
REPIN1-201ENST00000397281 MIER1Q8N108 512 aa23.12■■□□□ 1.29
REPIN1-201ENST00000397281 EEA1Q15075 1411 aa23.11■■□□□ 1.29
REPIN1-201ENST00000397281 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
REPIN1-201ENST00000397281 APLP2Q06481 763 aa23.1■■□□□ 1.29
REPIN1-201ENST00000397281 CLIP1P30622 1438 aa23.01■■□□□ 1.27
REPIN1-201ENST00000397281 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
REPIN1-201ENST00000397281 NESP48681 1621 aa22.95■■□□□ 1.26
REPIN1-201ENST00000397281 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
REPIN1-201ENST00000397281 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
REPIN1-201ENST00000397281 CFTRP13569 1480 aa22.89■■□□□ 1.26
REPIN1-201ENST00000397281 RAPGEF2Q9Y4G8 1499 aa22.86■■□□□ 1.25
REPIN1-201ENST00000397281 VPS8Q8N3P4 1428 aa22.85■■□□□ 1.25
REPIN1-201ENST00000397281 CUX1P39880 1505 aa22.76■■□□□ 1.23
REPIN1-201ENST00000397281 KIF21BO75037 1637 aa22.75■■□□□ 1.23
REPIN1-201ENST00000397281 ITGAEP38570 1179 aa22.73■■□□□ 1.23
REPIN1-201ENST00000397281 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
REPIN1-201ENST00000397281 KANK4Q5T7N3 995 aaPredicted RBP22.69■■□□□ 1.22
REPIN1-201ENST00000397281 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
REPIN1-201ENST00000397281 DHX57Q6P158 1386 aaKnown RBP22.6■■□□□ 1.21
REPIN1-201ENST00000397281 CUX2O14529 1486 aa22.55■■□□□ 1.2
REPIN1-201ENST00000397281 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
REPIN1-201ENST00000397281 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
REPIN1-201ENST00000397281 MYT1Q01538 1121 aa22.51■■□□□ 1.19
REPIN1-201ENST00000397281 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
REPIN1-201ENST00000397281 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
REPIN1-201ENST00000397281 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
REPIN1-201ENST00000397281 SUPT16HQ9Y5B9 1047 aaKnown RBP22.45■■□□□ 1.18
REPIN1-201ENST00000397281 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
REPIN1-201ENST00000397281 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
REPIN1-201ENST00000397281 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
REPIN1-201ENST00000397281 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
REPIN1-201ENST00000397281 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
REPIN1-201ENST00000397281 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
REPIN1-201ENST00000397281 PRXQ9BXM0 1461 aa22.39■■□□□ 1.18
REPIN1-201ENST00000397281 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
REPIN1-201ENST00000397281 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms