RNA–Protein interactions for RNA: ENST00000257700.6

RINT1-201, Transcript of RAD50 interactor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RINT1, Length 2,976 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RINT1-201ENST00000257700 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
RINT1-201ENST00000257700 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
RINT1-201ENST00000257700 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
RINT1-201ENST00000257700 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
RINT1-201ENST00000257700 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
RINT1-201ENST00000257700 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
RINT1-201ENST00000257700 ABCC9O60706 1549 aa21.98■■□□□ 1.11
RINT1-201ENST00000257700 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.09
RINT1-201ENST00000257700 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
RINT1-201ENST00000257700 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
RINT1-201ENST00000257700 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
RINT1-201ENST00000257700 NACADO15069 1562 aa21.37■■□□□ 1.01
RINT1-201ENST00000257700 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
RINT1-201ENST00000257700 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
RINT1-201ENST00000257700 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
RINT1-201ENST00000257700 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
RINT1-201ENST00000257700 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
RINT1-201ENST00000257700 LOC105371045A0A1W2PR82 267 aa20.9■□□□□ 0.94
RINT1-201ENST00000257700 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
RINT1-201ENST00000257700 FAM9AQ8IZU1 332 aaPredicted RBP20.85■□□□□ 0.93
RINT1-201ENST00000257700 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
RINT1-201ENST00000257700 WIZO95785 1651 aa20.82■□□□□ 0.92
RINT1-201ENST00000257700 UNC13AQ9UPW8 1703 aa20.74■□□□□ 0.91
RINT1-201ENST00000257700 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
RINT1-201ENST00000257700 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
RINT1-201ENST00000257700 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
RINT1-201ENST00000257700 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
RINT1-201ENST00000257700 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
RINT1-201ENST00000257700 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
RINT1-201ENST00000257700 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
RINT1-201ENST00000257700 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
RINT1-201ENST00000257700 ATAD2BQ9ULI0 1458 aa20.19■□□□□ 0.82
RINT1-201ENST00000257700 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
RINT1-201ENST00000257700 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
RINT1-201ENST00000257700 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
RINT1-201ENST00000257700 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
RINT1-201ENST00000257700 SOGA1O94964 1423 aa20.04■□□□□ 0.8
RINT1-201ENST00000257700 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
RINT1-201ENST00000257700 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
RINT1-201ENST00000257700 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
RINT1-201ENST00000257700 HRCP23327 699 aa20.01■□□□□ 0.79
RINT1-201ENST00000257700 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
RINT1-201ENST00000257700 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
RINT1-201ENST00000257700 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
RINT1-201ENST00000257700 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
RINT1-201ENST00000257700 SYNJ1O43426 1573 aa19.82■□□□□ 0.76
RINT1-201ENST00000257700 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
RINT1-201ENST00000257700 CEP162Q5TB80 1403 aa19.73■□□□□ 0.75
RINT1-201ENST00000257700 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
RINT1-201ENST00000257700 EEA1Q15075 1411 aa19.71■□□□□ 0.75
RINT1-201ENST00000257700 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
RINT1-201ENST00000257700 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
RINT1-201ENST00000257700 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
RINT1-201ENST00000257700 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
RINT1-201ENST00000257700 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
RINT1-201ENST00000257700 CFTRP13569 1480 aa19.56■□□□□ 0.72
RINT1-201ENST00000257700 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
RINT1-201ENST00000257700 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
RINT1-201ENST00000257700 CUX1P39880 1505 aa19.52■□□□□ 0.71
RINT1-201ENST00000257700 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.71
RINT1-201ENST00000257700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
RINT1-201ENST00000257700 CLIP1P30622 1438 aa19.49■□□□□ 0.71
RINT1-201ENST00000257700 APLP2Q06481 763 aa19.48■□□□□ 0.71
RINT1-201ENST00000257700 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
RINT1-201ENST00000257700 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
RINT1-201ENST00000257700 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
RINT1-201ENST00000257700 KIF21BO75037 1637 aa19.4■□□□□ 0.7
RINT1-201ENST00000257700 NESP48681 1621 aa19.4■□□□□ 0.7
RINT1-201ENST00000257700 CUX2O14529 1486 aa19.37■□□□□ 0.69
RINT1-201ENST00000257700 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
RINT1-201ENST00000257700 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
RINT1-201ENST00000257700 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
RINT1-201ENST00000257700 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
RINT1-201ENST00000257700 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
RINT1-201ENST00000257700 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
RINT1-201ENST00000257700 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
RINT1-201ENST00000257700 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
RINT1-201ENST00000257700 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
RINT1-201ENST00000257700 IGF1RP08069 1367 aa19.22■□□□□ 0.67
RINT1-201ENST00000257700 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
RINT1-201ENST00000257700 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
RINT1-201ENST00000257700 ERICH3Q5RHP9 1530 aa19.17■□□□□ 0.66
RINT1-201ENST00000257700 KANK4Q5T7N3 995 aaPredicted RBP19.13■□□□□ 0.65
RINT1-201ENST00000257700 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
RINT1-201ENST00000257700 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
RINT1-201ENST00000257700 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
RINT1-201ENST00000257700 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
RINT1-201ENST00000257700 ITGAEP38570 1179 aa19.09■□□□□ 0.65
RINT1-201ENST00000257700 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
RINT1-201ENST00000257700 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
RINT1-201ENST00000257700 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
RINT1-201ENST00000257700 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
RINT1-201ENST00000257700 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.63
RINT1-201ENST00000257700 ABCA10Q8WWZ4 1543 aa18.96■□□□□ 0.63
RINT1-201ENST00000257700 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
RINT1-201ENST00000257700 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
RINT1-201ENST00000257700 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
RINT1-201ENST00000257700 FAM50AQ14320 339 aaKnown RBP18.86■□□□□ 0.61
RINT1-201ENST00000257700 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.613e-7■■■■■ 33.2
RINT1-201ENST00000257700 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms