RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
MBD1-225ENST00000591535 CCDC180Q9P1Z9 1646 aa29.81■■■□□ 2.36
MBD1-225ENST00000591535 ABCC9O60706 1549 aa29.03■■■□□ 2.24
MBD1-225ENST00000591535 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
MBD1-225ENST00000591535 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
MBD1-225ENST00000591535 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
MBD1-225ENST00000591535 NACADO15069 1562 aa27.99■■■□□ 2.07
MBD1-225ENST00000591535 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
MBD1-225ENST00000591535 DCAF1Q9Y4B6 1507 aa27.81■■■□□ 2.04
MBD1-225ENST00000591535 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
MBD1-225ENST00000591535 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
MBD1-225ENST00000591535 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.95
MBD1-225ENST00000591535 BICRAQ9NZM4 1560 aa27.1■■□□□ 1.93
MBD1-225ENST00000591535 SHROOM4Q9ULL8 1493 aa26.84■■□□□ 1.89
MBD1-225ENST00000591535 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
MBD1-225ENST00000591535 EIF4G1Q04637 1599 aaKnown RBP26.39■■□□□ 1.82
MBD1-225ENST00000591535 CC2D2AQ9P2K1 1620 aa26.24■■□□□ 1.79
MBD1-225ENST00000591535 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
MBD1-225ENST00000591535 BAZ1AQ9NRL2 1556 aaPredicted RBP26.08■■□□□ 1.77
MBD1-225ENST00000591535 SMARCA4P51532 1647 aa26.08■■□□□ 1.77
MBD1-225ENST00000591535 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
MBD1-225ENST00000591535 ATAD2BQ9ULI0 1458 aa25.87■■□□□ 1.73
MBD1-225ENST00000591535 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
MBD1-225ENST00000591535 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
MBD1-225ENST00000591535 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
MBD1-225ENST00000591535 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
MBD1-225ENST00000591535 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
MBD1-225ENST00000591535 WIZO95785 1651 aa25.71■■□□□ 1.71
MBD1-225ENST00000591535 HMGXB3Q12766 1538 aa25.7■■□□□ 1.7
MBD1-225ENST00000591535 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
MBD1-225ENST00000591535 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
MBD1-225ENST00000591535 NESP48681 1621 aa25.17■■□□□ 1.62
MBD1-225ENST00000591535 CCDC88BA6NC98 1476 aa25.14■■□□□ 1.62
MBD1-225ENST00000591535 LAMC3Q9Y6N6 1575 aa25.11■■□□□ 1.61
MBD1-225ENST00000591535 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
MBD1-225ENST00000591535 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
MBD1-225ENST00000591535 CFTRP13569 1480 aa24.97■■□□□ 1.59
MBD1-225ENST00000591535 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
MBD1-225ENST00000591535 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.57
MBD1-225ENST00000591535 PRDM2Q13029 1718 aa24.83■■□□□ 1.56
MBD1-225ENST00000591535 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
MBD1-225ENST00000591535 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
MBD1-225ENST00000591535 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
MBD1-225ENST00000591535 MRC2Q9UBG0 1479 aa24.68■■□□□ 1.54
MBD1-225ENST00000591535 CUX2O14529 1486 aa24.61■■□□□ 1.53
MBD1-225ENST00000591535 WDR62O43379 1518 aa24.56■■□□□ 1.52
MBD1-225ENST00000591535 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
MBD1-225ENST00000591535 ABCC8Q09428 1581 aa24.45■■□□□ 1.51
MBD1-225ENST00000591535 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
MBD1-225ENST00000591535 DNMBPQ6XZF7 1577 aa24.43■■□□□ 1.5
MBD1-225ENST00000591535 CUX1P39880 1505 aa24.33■■□□□ 1.49
MBD1-225ENST00000591535 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
MBD1-225ENST00000591535 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
MBD1-225ENST00000591535 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
MBD1-225ENST00000591535 IFT140Q96RY7 1462 aa24.23■■□□□ 1.47
MBD1-225ENST00000591535 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
MBD1-225ENST00000591535 SOGA1O94964 1423 aa24.18■■□□□ 1.46
MBD1-225ENST00000591535 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
MBD1-225ENST00000591535 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
MBD1-225ENST00000591535 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
MBD1-225ENST00000591535 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.45
MBD1-225ENST00000591535 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
MBD1-225ENST00000591535 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
MBD1-225ENST00000591535 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.446e-7■■■□□ 18.9
MBD1-225ENST00000591535 EIF4G3O43432 1585 aaKnown RBP24.02■■□□□ 1.44
MBD1-225ENST00000591535 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
MBD1-225ENST00000591535 ABCA10Q8WWZ4 1543 aa23.98■■□□□ 1.43
MBD1-225ENST00000591535 TRIM41Q8WV44 630 aa23.95■■□□□ 1.43
MBD1-225ENST00000591535 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
MBD1-225ENST00000591535 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
MBD1-225ENST00000591535 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
MBD1-225ENST00000591535 PBRM1Q86U86 1689 aa23.83■■□□□ 1.41
MBD1-225ENST00000591535 FBLN2P98095 1184 aa23.8■■□□□ 1.4
MBD1-225ENST00000591535 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
MBD1-225ENST00000591535 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
MBD1-225ENST00000591535 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
MBD1-225ENST00000591535 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
MBD1-225ENST00000591535 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
MBD1-225ENST00000591535 OSCARQ8IYS5 282 aa23.71■■□□□ 1.39
MBD1-225ENST00000591535 CHD1O14646 1710 aa23.71■■□□□ 1.39
MBD1-225ENST00000591535 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
MBD1-225ENST00000591535 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
MBD1-225ENST00000591535 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.38
MBD1-225ENST00000591535 IGF1RP08069 1367 aa23.63■■□□□ 1.37
MBD1-225ENST00000591535 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
MBD1-225ENST00000591535 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
MBD1-225ENST00000591535 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
MBD1-225ENST00000591535 CUL7Q14999 1698 aa23.55■■□□□ 1.36
MBD1-225ENST00000591535 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
MBD1-225ENST00000591535 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
MBD1-225ENST00000591535 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
MBD1-225ENST00000591535 EEA1Q15075 1411 aa23.43■■□□□ 1.34
MBD1-225ENST00000591535 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
MBD1-225ENST00000591535 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
MBD1-225ENST00000591535 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
MBD1-225ENST00000591535 NUP160Q12769 1436 aa23.39■■□□□ 1.34
MBD1-225ENST00000591535 RAPGEF2Q9Y4G8 1499 aa23.39■■□□□ 1.33
MBD1-225ENST00000591535 PRXQ9BXM0 1461 aa23.32■■□□□ 1.32
MBD1-225ENST00000591535 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
MBD1-225ENST00000591535 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms