RNA–Protein interactions for RNA: ENST00000504878.1

CCNH-203, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-203ENST00000504878 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
CCNH-203ENST00000504878 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
CCNH-203ENST00000504878 ABCC9O60706 1549 aa25.79■■□□□ 1.72
CCNH-203ENST00000504878 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
CCNH-203ENST00000504878 NACADO15069 1562 aa24.72■■□□□ 1.55
CCNH-203ENST00000504878 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
CCNH-203ENST00000504878 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
CCNH-203ENST00000504878 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
CCNH-203ENST00000504878 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
CCNH-203ENST00000504878 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
CCNH-203ENST00000504878 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
CCNH-203ENST00000504878 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
CCNH-203ENST00000504878 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
CCNH-203ENST00000504878 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
CCNH-203ENST00000504878 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
CCNH-203ENST00000504878 SHROOM4Q9ULL8 1493 aa23.77■■□□□ 1.4
CCNH-203ENST00000504878 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
CCNH-203ENST00000504878 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
CCNH-203ENST00000504878 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
CCNH-203ENST00000504878 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
CCNH-203ENST00000504878 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
CCNH-203ENST00000504878 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
CCNH-203ENST00000504878 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
CCNH-203ENST00000504878 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
CCNH-203ENST00000504878 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
CCNH-203ENST00000504878 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
CCNH-203ENST00000504878 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
CCNH-203ENST00000504878 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
CCNH-203ENST00000504878 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
CCNH-203ENST00000504878 WIZO95785 1651 aa22.51■■□□□ 1.19
CCNH-203ENST00000504878 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
CCNH-203ENST00000504878 NESP48681 1621 aa22.31■■□□□ 1.16
CCNH-203ENST00000504878 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
CCNH-203ENST00000504878 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
CCNH-203ENST00000504878 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
CCNH-203ENST00000504878 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
CCNH-203ENST00000504878 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.13
CCNH-203ENST00000504878 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
CCNH-203ENST00000504878 CUX2O14529 1486 aa22.03■■□□□ 1.12
CCNH-203ENST00000504878 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
CCNH-203ENST00000504878 CFTRP13569 1480 aa21.99■■□□□ 1.11
CCNH-203ENST00000504878 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
CCNH-203ENST00000504878 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
CCNH-203ENST00000504878 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
CCNH-203ENST00000504878 MRC2Q9UBG0 1479 aa21.86■■□□□ 1.09
CCNH-203ENST00000504878 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
CCNH-203ENST00000504878 WDR62O43379 1518 aa21.81■■□□□ 1.08
CCNH-203ENST00000504878 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
CCNH-203ENST00000504878 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
CCNH-203ENST00000504878 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
CCNH-203ENST00000504878 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
CCNH-203ENST00000504878 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
CCNH-203ENST00000504878 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.03
CCNH-203ENST00000504878 IFT140Q96RY7 1462 aa21.39■■□□□ 1.02
CCNH-203ENST00000504878 CUX1P39880 1505 aa21.35■■□□□ 1.01
CCNH-203ENST00000504878 POLA1P09884 1462 aaPredicted RBP21.35■■□□□ 1.01
CCNH-203ENST00000504878 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
CCNH-203ENST00000504878 TARBP1Q13395 1621 aaKnown RBP21.34■■□□□ 1.01
CCNH-203ENST00000504878 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
CCNH-203ENST00000504878 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
CCNH-203ENST00000504878 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
CCNH-203ENST00000504878 SOGA1O94964 1423 aa21.21■□□□□ 0.99
CCNH-203ENST00000504878 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
CCNH-203ENST00000504878 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.981e-6■■□□□ 13.1
CCNH-203ENST00000504878 WDR97A6NE52 1622 aa21.16■□□□□ 0.98
CCNH-203ENST00000504878 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
CCNH-203ENST00000504878 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
CCNH-203ENST00000504878 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
CCNH-203ENST00000504878 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
CCNH-203ENST00000504878 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
CCNH-203ENST00000504878 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
CCNH-203ENST00000504878 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
CCNH-203ENST00000504878 CHD1O14646 1710 aa21.04■□□□□ 0.96
CCNH-203ENST00000504878 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
CCNH-203ENST00000504878 PBRM1Q86U86 1689 aa21■□□□□ 0.95
CCNH-203ENST00000504878 GRIN2BQ13224 1484 aa21■□□□□ 0.95
CCNH-203ENST00000504878 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
CCNH-203ENST00000504878 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
CCNH-203ENST00000504878 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
CCNH-203ENST00000504878 FBLN2P98095 1184 aa20.88■□□□□ 0.93
CCNH-203ENST00000504878 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
CCNH-203ENST00000504878 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
CCNH-203ENST00000504878 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
CCNH-203ENST00000504878 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
CCNH-203ENST00000504878 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
CCNH-203ENST00000504878 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
CCNH-203ENST00000504878 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
CCNH-203ENST00000504878 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
CCNH-203ENST00000504878 CLASP1Q7Z460 1538 aa20.79■□□□□ 0.92
CCNH-203ENST00000504878 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
CCNH-203ENST00000504878 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
CCNH-203ENST00000504878 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
CCNH-203ENST00000504878 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
CCNH-203ENST00000504878 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
CCNH-203ENST00000504878 CEP170Q5SW79 1584 aa20.67■□□□□ 0.9
CCNH-203ENST00000504878 NUP160Q12769 1436 aa20.66■□□□□ 0.9
CCNH-203ENST00000504878 IGF1RP08069 1367 aa20.62■□□□□ 0.89
CCNH-203ENST00000504878 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
CCNH-203ENST00000504878 CUL7Q14999 1698 aa20.61■□□□□ 0.89
CCNH-203ENST00000504878 SHROOM2Q13796 1616 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms