RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.87
MBD1-212ENST00000585672 HRCP23327 699 aa25.51■■□□□ 1.67
MBD1-212ENST00000585672 PELP1Q8IZL8 1130 aaKnown RBP25.3■■□□□ 1.64
MBD1-212ENST00000585672 PPARGC1BQ86YN6 1023 aaKnown RBP24.96■■□□□ 1.59
MBD1-212ENST00000585672 PCGF6Q9BYE7 350 aa24.7■■□□□ 1.54
MBD1-212ENST00000585672 MYT1Q01538 1121 aa24.44■■□□□ 1.5
MBD1-212ENST00000585672 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
MBD1-212ENST00000585672 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
MBD1-212ENST00000585672 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
MBD1-212ENST00000585672 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
MBD1-212ENST00000585672 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
MBD1-212ENST00000585672 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
MBD1-212ENST00000585672 TRIM26Q12899 539 aaPredicted RBP23.78■■□□□ 1.4
MBD1-212ENST00000585672 ZEB1P37275 1124 aaPredicted RBP23.73■■□□□ 1.39
MBD1-212ENST00000585672 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.39
MBD1-212ENST00000585672 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
MBD1-212ENST00000585672 NEUROD1Q13562 356 aa23.57■■□□□ 1.36
MBD1-212ENST00000585672 LOC105371045A0A1W2PR82 267 aa23.54■■□□□ 1.36
MBD1-212ENST00000585672 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
MBD1-212ENST00000585672 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
MBD1-212ENST00000585672 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
MBD1-212ENST00000585672 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
MBD1-212ENST00000585672 BCL11AQ9H165 835 aa22.88■■□□□ 1.25
MBD1-212ENST00000585672 ZCCHC6Q5VYS8 1495 aaKnown RBP22.81■■□□□ 1.24
MBD1-212ENST00000585672 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
MBD1-212ENST00000585672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.72■■□□□ 1.23
MBD1-212ENST00000585672 CCER1Q8TC90 406 aaPredicted RBP22.66■■□□□ 1.22
MBD1-212ENST00000585672 YTHDC1Q96MU7 727 aaKnown RBP22.61■■□□□ 1.21
MBD1-212ENST00000585672 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
MBD1-212ENST00000585672 ANP32EQ9BTT0 268 aa22.56■■□□□ 1.2
MBD1-212ENST00000585672 ZNF316A6NFI3 1004 aaPredicted RBP22.38■■□□□ 1.17
MBD1-212ENST00000585672 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
MBD1-212ENST00000585672 MIER1Q8N108 512 aa22.34■■□□□ 1.17
MBD1-212ENST00000585672 PRKCSHP14314 528 aaPredicted RBP22.32■■□□□ 1.16
MBD1-212ENST00000585672 TSHZ2Q9NRE2 1034 aa22.29■■□□□ 1.16
MBD1-212ENST00000585672 EHMT2Q96KQ7 1210 aa22.28■■□□□ 1.16
MBD1-212ENST00000585672 SUPT16HQ9Y5B9 1047 aaKnown RBP22.23■■□□□ 1.15
MBD1-212ENST00000585672 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
MBD1-212ENST00000585672 CLSPNQ9HAW4 1339 aa22.12■■□□□ 1.13
MBD1-212ENST00000585672 ABCC9O60706 1549 aa21.77■■□□□ 1.08
MBD1-212ENST00000585672 ERICH6Q7L0X2 663 aa21.75■■□□□ 1.07
MBD1-212ENST00000585672 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
MBD1-212ENST00000585672 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
MBD1-212ENST00000585672 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
MBD1-212ENST00000585672 RBM19Q9Y4C8 960 aaKnown RBP21.7■■□□□ 1.06
MBD1-212ENST00000585672 BCANQ96GW7 911 aa21.64■■□□□ 1.06
MBD1-212ENST00000585672 MSH5O43196 834 aa21.6■■□□□ 1.05
MBD1-212ENST00000585672 APLP2Q06481 763 aa21.55■■□□□ 1.04
MBD1-212ENST00000585672 FKBP8Q14318 412 aa21.51■■□□□ 1.03
MBD1-212ENST00000585672 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
MBD1-212ENST00000585672 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
MBD1-212ENST00000585672 ANO8Q9HCE9 1232 aaPredicted RBP21.43■■□□□ 1.02
MBD1-212ENST00000585672 KCNH8Q96L42 1107 aa21.39■■□□□ 1.01
MBD1-212ENST00000585672 ITGAEP38570 1179 aa21.34■■□□□ 1.01
MBD1-212ENST00000585672 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
MBD1-212ENST00000585672 DEKP35659 375 aaKnown RBP21.31■■□□□ 1
MBD1-212ENST00000585672 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
MBD1-212ENST00000585672 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
MBD1-212ENST00000585672 NEFLP07196 543 aa21.23■□□□□ 0.99
MBD1-212ENST00000585672 SALL2Q9Y467 1007 aaPredicted RBP21.16■□□□□ 0.98
MBD1-212ENST00000585672 DHX57Q6P158 1386 aaKnown RBP21.12■□□□□ 0.97
MBD1-212ENST00000585672 UBTFP17480 764 aaKnown RBP21.09■□□□□ 0.97
MBD1-212ENST00000585672 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
MBD1-212ENST00000585672 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
MBD1-212ENST00000585672 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
MBD1-212ENST00000585672 ERICH6BQ5W0A0 696 aa21.05■□□□□ 0.96
MBD1-212ENST00000585672 SOGA1O94964 1423 aa21.04■□□□□ 0.96
MBD1-212ENST00000585672 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
MBD1-212ENST00000585672 CDK11AQ9UQ88 783 aaPredicted RBP21.03■□□□□ 0.96
MBD1-212ENST00000585672 CCDC136Q96JN2 1154 aa21.02■□□□□ 0.95
MBD1-212ENST00000585672 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
MBD1-212ENST00000585672 UBE2Q2Q8WVN8 375 aa20.96■□□□□ 0.95
MBD1-212ENST00000585672 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
MBD1-212ENST00000585672 CECR2Q9BXF3 1484 aa20.93■□□□□ 0.94
MBD1-212ENST00000585672 NBR1Q14596 966 aa20.91■□□□□ 0.94
MBD1-212ENST00000585672 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
MBD1-212ENST00000585672 RUSC2Q8N2Y8 1516 aa20.9■□□□□ 0.94
MBD1-212ENST00000585672 DDX10Q13206 875 aaKnown RBP20.89■□□□□ 0.94
MBD1-212ENST00000585672 WIZO95785 1651 aa20.88■□□□□ 0.93
MBD1-212ENST00000585672 EEA1Q15075 1411 aa20.87■□□□□ 0.93
MBD1-212ENST00000585672 IL27Q8NEV9 243 aa20.85■□□□□ 0.93
MBD1-212ENST00000585672 CLIP1P30622 1438 aa20.85■□□□□ 0.93
MBD1-212ENST00000585672 NOP58Q9Y2X3 529 aaKnown RBP20.83■□□□□ 0.93
MBD1-212ENST00000585672 IRX6P78412 446 aaPredicted RBP20.83■□□□□ 0.92
MBD1-212ENST00000585672 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
MBD1-212ENST00000585672 PAK3O75914 559 aaPredicted RBP20.81■□□□□ 0.92
MBD1-212ENST00000585672 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.81■□□□□ 0.92
MBD1-212ENST00000585672 CCER2I3L3R5 266 aa20.8■□□□□ 0.92
MBD1-212ENST00000585672 PPP1R15AO75807 674 aaPredicted RBP20.79■□□□□ 0.92
MBD1-212ENST00000585672 NACADO15069 1562 aa20.79■□□□□ 0.92
MBD1-212ENST00000585672 RTN4Q9NQC3 1192 aaKnown RBP20.78■□□□□ 0.92
MBD1-212ENST00000585672 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
MBD1-212ENST00000585672 ANP32CO43423 234 aa20.68■□□□□ 0.9
MBD1-212ENST00000585672 PPP4R2Q9NY27 417 aa20.67■□□□□ 0.9
MBD1-212ENST00000585672 RTL5Q5HYW3 569 aaPredicted RBP20.65■□□□□ 0.9
MBD1-212ENST00000585672 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
MBD1-212ENST00000585672 CUX2O14529 1486 aa20.62■□□□□ 0.89
MBD1-212ENST00000585672 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
MBD1-212ENST00000585672 HNRNPUQ00839 825 aaKnown RBP eCLIP20.58■□□□□ 0.88
MBD1-212ENST00000585672 MAPKBP1O60336 1514 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms