RNA–Protein interactions for RNA: ENST00000519397.1

REPIN1-218, Transcript of replication initiator 1, humanhuman

TSL 4

Gene REPIN1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-218ENST00000519397 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
REPIN1-218ENST00000519397 ABCC9O60706 1549 aa35.5■■■■□ 3.27
REPIN1-218ENST00000519397 CCDC180Q9P1Z9 1646 aa34.8■■■■□ 3.16
REPIN1-218ENST00000519397 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
REPIN1-218ENST00000519397 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
REPIN1-218ENST00000519397 DCAF8L2P0C7V8 631 aa33.38■■■□□ 2.93
REPIN1-218ENST00000519397 PABPN1Q86U42 306 aaKnown RBP eCLIP33.11■■■□□ 2.89
REPIN1-218ENST00000519397 NACADO15069 1562 aa33.11■■■□□ 2.89
REPIN1-218ENST00000519397 UNC13AQ9UPW8 1703 aa32.54■■■□□ 2.8
REPIN1-218ENST00000519397 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
REPIN1-218ENST00000519397 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
REPIN1-218ENST00000519397 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
REPIN1-218ENST00000519397 CC2D2AQ9P2K1 1620 aa31.92■■■□□ 2.7
REPIN1-218ENST00000519397 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
REPIN1-218ENST00000519397 SHROOM4Q9ULL8 1493 aa31.9■■■□□ 2.7
REPIN1-218ENST00000519397 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
REPIN1-218ENST00000519397 DCAF1Q9Y4B6 1507 aa31.81■■■□□ 2.68
REPIN1-218ENST00000519397 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
REPIN1-218ENST00000519397 DNAJC5Q9H3Z4 198 aa31.28■■■□□ 2.6
REPIN1-218ENST00000519397 ERCC6Q03468 1493 aa30.78■■■□□ 2.52
REPIN1-218ENST00000519397 CUX2O14529 1486 aa30.67■■■□□ 2.5
REPIN1-218ENST00000519397 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
REPIN1-218ENST00000519397 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
REPIN1-218ENST00000519397 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
REPIN1-218ENST00000519397 NESP48681 1621 aa30.29■■■□□ 2.44
REPIN1-218ENST00000519397 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
REPIN1-218ENST00000519397 HMGXB3Q12766 1538 aa30.24■■■□□ 2.43
REPIN1-218ENST00000519397 BAZ1BQ9UIG0 1483 aaKnown RBP30.21■■■□□ 2.43
REPIN1-218ENST00000519397 BAZ1AQ9NRL2 1556 aaPredicted RBP30.09■■■□□ 2.41
REPIN1-218ENST00000519397 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
REPIN1-218ENST00000519397 LAMC3Q9Y6N6 1575 aa29.95■■■□□ 2.39
REPIN1-218ENST00000519397 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
REPIN1-218ENST00000519397 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
REPIN1-218ENST00000519397 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
REPIN1-218ENST00000519397 MROH2BQ7Z745 1585 aa29.81■■■□□ 2.36
REPIN1-218ENST00000519397 KIF21AQ7Z4S6 1674 aa29.8■■■□□ 2.36
REPIN1-218ENST00000519397 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
REPIN1-218ENST00000519397 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
REPIN1-218ENST00000519397 WDR62O43379 1518 aa29.46■■■□□ 2.31
REPIN1-218ENST00000519397 CEP164Q9UPV0 1460 aa29.46■■■□□ 2.31
REPIN1-218ENST00000519397 WIZO95785 1651 aa29.44■■■□□ 2.3
REPIN1-218ENST00000519397 OSCARQ8IYS5 282 aa29.43■■■□□ 2.3
REPIN1-218ENST00000519397 FANCD2Q9BXW9 1451 aa29.37■■■□□ 2.29
REPIN1-218ENST00000519397 CFTRP13569 1480 aa29.19■■■□□ 2.26
REPIN1-218ENST00000519397 URB2Q14146 1524 aaKnown RBP29.08■■■□□ 2.25
REPIN1-218ENST00000519397 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
REPIN1-218ENST00000519397 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
REPIN1-218ENST00000519397 IFT140Q96RY7 1462 aa28.86■■■□□ 2.21
REPIN1-218ENST00000519397 RIMBP3CA6NJZ7 1639 aa28.86■■■□□ 2.21
REPIN1-218ENST00000519397 RIMBP3BA6NNM3 1639 aa28.86■■■□□ 2.21
REPIN1-218ENST00000519397 RIMBP3Q9UFD9 1639 aa28.86■■■□□ 2.21
REPIN1-218ENST00000519397 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
REPIN1-218ENST00000519397 CYB5RLQ6IPT4 315 aa28.83■■■□□ 2.21
REPIN1-218ENST00000519397 TRHP20396 242 aaPredicted RBP28.79■■■□□ 2.2
REPIN1-218ENST00000519397 FBLN2P98095 1184 aa28.79■■■□□ 2.2
REPIN1-218ENST00000519397 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
REPIN1-218ENST00000519397 PRDM2Q13029 1718 aa28.74■■■□□ 2.19
REPIN1-218ENST00000519397 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
REPIN1-218ENST00000519397 TOPBP1Q92547 1522 aa28.72■■■□□ 2.19
REPIN1-218ENST00000519397 ABCC8Q09428 1581 aa28.69■■■□□ 2.18
REPIN1-218ENST00000519397 AQRO60306 1485 aaKnown RBP eCLIP28.6■■■□□ 2.172e-10■■■■■ 52.5
REPIN1-218ENST00000519397 EIF4G3O43432 1585 aaKnown RBP28.6■■■□□ 2.17
REPIN1-218ENST00000519397 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
REPIN1-218ENST00000519397 CHD1O14646 1710 aa28.47■■■□□ 2.15
REPIN1-218ENST00000519397 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
REPIN1-218ENST00000519397 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
REPIN1-218ENST00000519397 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
REPIN1-218ENST00000519397 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
REPIN1-218ENST00000519397 SOGA1O94964 1423 aa28.39■■■□□ 2.14
REPIN1-218ENST00000519397 POLA1P09884 1462 aaPredicted RBP28.39■■■□□ 2.13
REPIN1-218ENST00000519397 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
REPIN1-218ENST00000519397 AEBP2Q6ZN18 517 aaPredicted RBP28.33■■■□□ 2.13
REPIN1-218ENST00000519397 SNAPC4Q5SXM2 1469 aa28.25■■■□□ 2.11
REPIN1-218ENST00000519397 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
REPIN1-218ENST00000519397 SYNJ1O43426 1573 aa28.17■■■□□ 2.1
REPIN1-218ENST00000519397 GRIN2BQ13224 1484 aa28.13■■■□□ 2.09
REPIN1-218ENST00000519397 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
REPIN1-218ENST00000519397 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.08
REPIN1-218ENST00000519397 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
REPIN1-218ENST00000519397 SYNJ2O15056 1496 aa28.06■■■□□ 2.08
REPIN1-218ENST00000519397 CUX1P39880 1505 aa28.02■■■□□ 2.08
REPIN1-218ENST00000519397 GAPVD1Q14C86 1478 aa27.98■■■□□ 2.07
REPIN1-218ENST00000519397 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
REPIN1-218ENST00000519397 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
REPIN1-218ENST00000519397 ABCA10Q8WWZ4 1543 aa27.78■■■□□ 2.04
REPIN1-218ENST00000519397 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.037e-10■■■■■ 33.4
REPIN1-218ENST00000519397 GRIN2AQ12879 1464 aa27.72■■■□□ 2.03
REPIN1-218ENST00000519397 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.03
REPIN1-218ENST00000519397 ERCC6L2Q5T890 1561 aa27.67■■■□□ 2.02
REPIN1-218ENST00000519397 CEP170Q5SW79 1584 aa27.62■■■□□ 2.01
REPIN1-218ENST00000519397 NPM1P06748 294 aaKnown RBP eCLIP27.61■■■□□ 2.01
REPIN1-218ENST00000519397 FHAD1B1AJZ9 1412 aa27.59■■■□□ 2.01
REPIN1-218ENST00000519397 NUP160Q12769 1436 aa27.58■■■□□ 2
REPIN1-218ENST00000519397 ADAMTS12P58397 1594 aa27.57■■■□□ 2
REPIN1-218ENST00000519397 JPH4Q96JJ6 628 aa27.53■■■□□ 2
REPIN1-218ENST00000519397 PRG4Q92954 1404 aaPredicted RBP27.52■■■□□ 2
REPIN1-218ENST00000519397 FAM69CQ0P6D2 419 aa27.5■■□□□ 1.99
REPIN1-218ENST00000519397 TOP2BQ02880 1626 aa27.45■■□□□ 1.98
REPIN1-218ENST00000519397 ERICH3Q5RHP9 1530 aa27.43■■□□□ 1.98
REPIN1-218ENST00000519397 SHROOM2Q13796 1616 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms