RNA–Protein interactions for RNA: ENST00000487455.1

REPIN1-212, Transcript of replication initiator 1, humanhuman

TSL 4

Gene REPIN1, Length 464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-212ENST00000487455 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
REPIN1-212ENST00000487455 ABCC9O60706 1549 aa22.03■■□□□ 1.12
REPIN1-212ENST00000487455 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
REPIN1-212ENST00000487455 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.96
REPIN1-212ENST00000487455 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
REPIN1-212ENST00000487455 NACADO15069 1562 aa20.51■□□□□ 0.87
REPIN1-212ENST00000487455 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
REPIN1-212ENST00000487455 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
REPIN1-212ENST00000487455 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
REPIN1-212ENST00000487455 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
REPIN1-212ENST00000487455 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
REPIN1-212ENST00000487455 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
REPIN1-212ENST00000487455 CC2D2AQ9P2K1 1620 aa19.86■□□□□ 0.77
REPIN1-212ENST00000487455 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
REPIN1-212ENST00000487455 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
REPIN1-212ENST00000487455 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
REPIN1-212ENST00000487455 SCRIBQ14160 1630 aa19.71■□□□□ 0.75
REPIN1-212ENST00000487455 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
REPIN1-212ENST00000487455 DNAJC5Q9H3Z4 198 aa19.55■□□□□ 0.72
REPIN1-212ENST00000487455 CUX2O14529 1486 aa19.1■□□□□ 0.65
REPIN1-212ENST00000487455 ERCC6Q03468 1493 aa19.04■□□□□ 0.64
REPIN1-212ENST00000487455 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
REPIN1-212ENST00000487455 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
REPIN1-212ENST00000487455 NESP48681 1621 aa18.82■□□□□ 0.6
REPIN1-212ENST00000487455 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
REPIN1-212ENST00000487455 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
REPIN1-212ENST00000487455 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
REPIN1-212ENST00000487455 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
REPIN1-212ENST00000487455 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
REPIN1-212ENST00000487455 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
REPIN1-212ENST00000487455 LAMC3Q9Y6N6 1575 aa18.58■□□□□ 0.56
REPIN1-212ENST00000487455 BAZ1AQ9NRL2 1556 aaPredicted RBP18.57■□□□□ 0.56
REPIN1-212ENST00000487455 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
REPIN1-212ENST00000487455 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
REPIN1-212ENST00000487455 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
REPIN1-212ENST00000487455 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
REPIN1-212ENST00000487455 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
REPIN1-212ENST00000487455 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
REPIN1-212ENST00000487455 WDR62O43379 1518 aa18.33■□□□□ 0.52
REPIN1-212ENST00000487455 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
REPIN1-212ENST00000487455 WIZO95785 1651 aa18.2■□□□□ 0.5
REPIN1-212ENST00000487455 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
REPIN1-212ENST00000487455 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
REPIN1-212ENST00000487455 CFTRP13569 1480 aa18.07■□□□□ 0.48
REPIN1-212ENST00000487455 URB2Q14146 1524 aaKnown RBP18.05■□□□□ 0.48
REPIN1-212ENST00000487455 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
REPIN1-212ENST00000487455 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
REPIN1-212ENST00000487455 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
REPIN1-212ENST00000487455 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
REPIN1-212ENST00000487455 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
REPIN1-212ENST00000487455 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
REPIN1-212ENST00000487455 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
REPIN1-212ENST00000487455 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
REPIN1-212ENST00000487455 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
REPIN1-212ENST00000487455 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
REPIN1-212ENST00000487455 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
REPIN1-212ENST00000487455 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
REPIN1-212ENST00000487455 TRHP20396 242 aaPredicted RBP17.75■□□□□ 0.43
REPIN1-212ENST00000487455 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
REPIN1-212ENST00000487455 CHD1O14646 1710 aa17.72■□□□□ 0.43
REPIN1-212ENST00000487455 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
REPIN1-212ENST00000487455 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.426e-14■■■■■ 61.6
REPIN1-212ENST00000487455 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
REPIN1-212ENST00000487455 FBLN2P98095 1184 aa17.68■□□□□ 0.42
REPIN1-212ENST00000487455 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
REPIN1-212ENST00000487455 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
REPIN1-212ENST00000487455 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
REPIN1-212ENST00000487455 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
REPIN1-212ENST00000487455 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
REPIN1-212ENST00000487455 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
REPIN1-212ENST00000487455 SOGA1O94964 1423 aa17.49■□□□□ 0.39
REPIN1-212ENST00000487455 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
REPIN1-212ENST00000487455 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
REPIN1-212ENST00000487455 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
REPIN1-212ENST00000487455 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
REPIN1-212ENST00000487455 FGD5Q6ZNL6 1462 aa17.42■□□□□ 0.38
REPIN1-212ENST00000487455 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
REPIN1-212ENST00000487455 MAGI1Q96QZ7 1491 aaPredicted RBP17.4■□□□□ 0.38
REPIN1-212ENST00000487455 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
REPIN1-212ENST00000487455 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
REPIN1-212ENST00000487455 CUX1P39880 1505 aa17.34■□□□□ 0.37
REPIN1-212ENST00000487455 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
REPIN1-212ENST00000487455 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
REPIN1-212ENST00000487455 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
REPIN1-212ENST00000487455 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
REPIN1-212ENST00000487455 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
REPIN1-212ENST00000487455 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
REPIN1-212ENST00000487455 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
REPIN1-212ENST00000487455 NUP160Q12769 1436 aa17.11■□□□□ 0.33
REPIN1-212ENST00000487455 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
REPIN1-212ENST00000487455 KIF13AQ9H1H9 1805 aa17.08■□□□□ 0.33
REPIN1-212ENST00000487455 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
REPIN1-212ENST00000487455 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
REPIN1-212ENST00000487455 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
REPIN1-212ENST00000487455 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
REPIN1-212ENST00000487455 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
REPIN1-212ENST00000487455 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
REPIN1-212ENST00000487455 ERICH3Q5RHP9 1530 aa16.95■□□□□ 0.3
REPIN1-212ENST00000487455 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
REPIN1-212ENST00000487455 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms