RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
MBD1-224ENST00000591416 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
MBD1-224ENST00000591416 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
MBD1-224ENST00000591416 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
MBD1-224ENST00000591416 EHMT2Q96KQ7 1210 aa25.11■■□□□ 1.61
MBD1-224ENST00000591416 ABCC9O60706 1549 aa24.93■■□□□ 1.58
MBD1-224ENST00000591416 FAM9AQ8IZU1 332 aaPredicted RBP24.87■■□□□ 1.57
MBD1-224ENST00000591416 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
MBD1-224ENST00000591416 APLP2Q06481 763 aa24.66■■□□□ 1.54
MBD1-224ENST00000591416 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.49
MBD1-224ENST00000591416 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
MBD1-224ENST00000591416 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
MBD1-224ENST00000591416 RANGAP1P46060 587 aaPredicted RBP24.26■■□□□ 1.47
MBD1-224ENST00000591416 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
MBD1-224ENST00000591416 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
MBD1-224ENST00000591416 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
MBD1-224ENST00000591416 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
MBD1-224ENST00000591416 ATP1B4Q9UN42 357 aaPredicted RBP23.99■■□□□ 1.43
MBD1-224ENST00000591416 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
MBD1-224ENST00000591416 LOC105371045A0A1W2PR82 267 aa23.7■■□□□ 1.38
MBD1-224ENST00000591416 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
MBD1-224ENST00000591416 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
MBD1-224ENST00000591416 PPARGC1BQ86YN6 1023 aaKnown RBP23.55■■□□□ 1.36
MBD1-224ENST00000591416 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
MBD1-224ENST00000591416 NACADO15069 1562 aa23.53■■□□□ 1.36
MBD1-224ENST00000591416 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
MBD1-224ENST00000591416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.38■■□□□ 1.33
MBD1-224ENST00000591416 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
MBD1-224ENST00000591416 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
MBD1-224ENST00000591416 ITGAEP38570 1179 aa23.18■■□□□ 1.3
MBD1-224ENST00000591416 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
MBD1-224ENST00000591416 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
MBD1-224ENST00000591416 FBLN2P98095 1184 aa23.01■■□□□ 1.27
MBD1-224ENST00000591416 MYT1LQ9UL68 1186 aa23.01■■□□□ 1.27
MBD1-224ENST00000591416 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
MBD1-224ENST00000591416 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
MBD1-224ENST00000591416 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
MBD1-224ENST00000591416 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
MBD1-224ENST00000591416 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.24
MBD1-224ENST00000591416 HRCP23327 699 aa22.82■■□□□ 1.24
MBD1-224ENST00000591416 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
MBD1-224ENST00000591416 CENPBP07199 599 aaPredicted RBP22.79■■□□□ 1.24
MBD1-224ENST00000591416 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
MBD1-224ENST00000591416 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
MBD1-224ENST00000591416 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
MBD1-224ENST00000591416 ARID3CA6NKF2 412 aa22.54■■□□□ 1.2
MBD1-224ENST00000591416 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
MBD1-224ENST00000591416 CDK11AQ9UQ88 783 aaPredicted RBP22.53■■□□□ 1.2
MBD1-224ENST00000591416 EEA1Q15075 1411 aa22.52■■□□□ 1.2
MBD1-224ENST00000591416 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
MBD1-224ENST00000591416 YTHDC1Q96MU7 727 aaKnown RBP22.44■■□□□ 1.18
MBD1-224ENST00000591416 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
MBD1-224ENST00000591416 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
MBD1-224ENST00000591416 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
MBD1-224ENST00000591416 NEUROD1Q13562 356 aa22.34■■□□□ 1.17
MBD1-224ENST00000591416 CLIP1P30622 1438 aa22.33■■□□□ 1.16
MBD1-224ENST00000591416 ZNF777Q9ULD5 760 aaPredicted RBP22.32■■□□□ 1.16
MBD1-224ENST00000591416 GOLGA3Q08378 1498 aa22.31■■□□□ 1.16
MBD1-224ENST00000591416 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
MBD1-224ENST00000591416 NEFLP07196 543 aa22.3■■□□□ 1.16
MBD1-224ENST00000591416 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
MBD1-224ENST00000591416 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
MBD1-224ENST00000591416 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
MBD1-224ENST00000591416 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
MBD1-224ENST00000591416 WIZO95785 1651 aa22.19■■□□□ 1.14
MBD1-224ENST00000591416 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
MBD1-224ENST00000591416 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
MBD1-224ENST00000591416 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
MBD1-224ENST00000591416 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
MBD1-224ENST00000591416 CNGB1Q14028 1251 aaPredicted RBP22.14■■□□□ 1.13
MBD1-224ENST00000591416 DIEXFQ68CQ4 756 aaKnown RBP22.14■■□□□ 1.13
MBD1-224ENST00000591416 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
MBD1-224ENST00000591416 ZNF326Q5BKZ1 582 aaKnown RBP22.11■■□□□ 1.13
MBD1-224ENST00000591416 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
MBD1-224ENST00000591416 CUX2O14529 1486 aa22.06■■□□□ 1.12
MBD1-224ENST00000591416 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
MBD1-224ENST00000591416 SOGA1O94964 1423 aa22.04■■□□□ 1.12
MBD1-224ENST00000591416 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
MBD1-224ENST00000591416 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
MBD1-224ENST00000591416 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
MBD1-224ENST00000591416 TSPY4P0CV99 314 aa21.96■■□□□ 1.11
MBD1-224ENST00000591416 TSPY10P0CW01 314 aa21.96■■□□□ 1.11
MBD1-224ENST00000591416 CHIC2Q9UKJ5 165 aa21.96■■□□□ 1.11
MBD1-224ENST00000591416 PLEKHD1A6NEE1 506 aa21.94■■□□□ 1.1
MBD1-224ENST00000591416 ZNF316A6NFI3 1004 aaPredicted RBP21.93■■□□□ 1.1
MBD1-224ENST00000591416 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
MBD1-224ENST00000591416 ESF1Q9H501 851 aaKnown RBP21.85■■□□□ 1.09
MBD1-224ENST00000591416 ANP32CO43423 234 aa21.83■■□□□ 1.09
MBD1-224ENST00000591416 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
MBD1-224ENST00000591416 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
MBD1-224ENST00000591416 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
MBD1-224ENST00000591416 ERICH6Q7L0X2 663 aa21.77■■□□□ 1.08
MBD1-224ENST00000591416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.76■■□□□ 1.07
MBD1-224ENST00000591416 BCANQ96GW7 911 aa21.75■■□□□ 1.07
MBD1-224ENST00000591416 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
MBD1-224ENST00000591416 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
MBD1-224ENST00000591416 CFDP1Q9UEE9 299 aaPredicted RBP21.73■■□□□ 1.07
MBD1-224ENST00000591416 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
MBD1-224ENST00000591416 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
MBD1-224ENST00000591416 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms