RNA–Protein interactions for RNA: ENST00000508855.5

CCNH-206, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 2,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-206ENST00000508855 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
CCNH-206ENST00000508855 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
CCNH-206ENST00000508855 CHIC1Q5VXU3 224 aa13.78□□□□□ -0.2
CCNH-206ENST00000508855 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
CCNH-206ENST00000508855 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
CCNH-206ENST00000508855 MSH5O43196 834 aa12.11□□□□□ -0.47
CCNH-206ENST00000508855 FOXD1Q16676 465 aa11.87□□□□□ -0.51
CCNH-206ENST00000508855 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
CCNH-206ENST00000508855 POTEHQ6S545 545 aa10.89□□□□□ -0.67
CCNH-206ENST00000508855 PIAS4Q8N2W9 510 aaPredicted RBP10.78□□□□□ -0.68
CCNH-206ENST00000508855 RNF39Q9H2S5 420 aa9.96□□□□□ -0.81
CCNH-206ENST00000508855 C1QBPQ07021 282 aaKnown RBP9.93□□□□□ -0.82
CCNH-206ENST00000508855 DMRT2Q9Y5R5 561 aa9.87□□□□□ -0.83
CCNH-206ENST00000508855 PPP6R1Q9UPN7 881 aa9.67□□□□□ -0.86
CCNH-206ENST00000508855 ADRA2BP18089 450 aa9.61□□□□□ -0.87
CCNH-206ENST00000508855 PLPPR3Q6T4P5 718 aa9.57□□□□□ -0.88
CCNH-206ENST00000508855 PLSCR2Q9NRY7 297 aa9.57□□□□□ -0.88
CCNH-206ENST00000508855 SP7Q8TDD2 431 aaPredicted RBP9.51□□□□□ -0.89
CCNH-206ENST00000508855 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
CCNH-206ENST00000508855 SCAF1Q9H7N4 1312 aaKnown RBP9.35□□□□□ -0.91
CCNH-206ENST00000508855 MAPK8IP2Q13387 824 aaPredicted RBP9.23□□□□□ -0.93
CCNH-206ENST00000508855 DNAJC5BQ9UF47 199 aa9.22□□□□□ -0.93
CCNH-206ENST00000508855 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
CCNH-206ENST00000508855 CHRDL2Q6WN34 429 aa8.88□□□□□ -0.99
CCNH-206ENST00000508855 LHX8Q68G74 356 aa8.88□□□□□ -0.99
CCNH-206ENST00000508855 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
CCNH-206ENST00000508855 DSG3P32926 999 aa8.75□□□□□ -1.01
CCNH-206ENST00000508855 RBM42Q9BTD8 480 aaKnown RBP8.73□□□□□ -1.01
CCNH-206ENST00000508855 HAX1O00165 279 aa8.61□□□□□ -1.03
CCNH-206ENST00000508855 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
CCNH-206ENST00000508855 CAPN15O75808 1086 aa8.44□□□□□ -1.06
CCNH-206ENST00000508855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.064e-7■■■□□ 15.3
CCNH-206ENST00000508855 RNF216Q9NWF9 866 aaPredicted RBP8.43□□□□□ -1.06
CCNH-206ENST00000508855 KCNA4P22459 653 aa8.43□□□□□ -1.06
CCNH-206ENST00000508855 POTEMA6NI47 508 aa8.39□□□□□ -1.07
CCNH-206ENST00000508855 POTEGQ6S5H5 508 aa8.3□□□□□ -1.08
CCNH-206ENST00000508855 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
CCNH-206ENST00000508855 NCBP3Q53F19 620 aaKnown RBP8.19□□□□□ -1.1
CCNH-206ENST00000508855 NPM3O75607 178 aaKnown RBP8.19□□□□□ -1.1
CCNH-206ENST00000508855 CNKSR2Q8WXI2 1034 aa8.19□□□□□ -1.1
CCNH-206ENST00000508855 SPINK5Q9NQ38 1064 aaPredicted RBP8.17□□□□□ -1.1
CCNH-206ENST00000508855 NISCHQ9Y2I1 1504 aa8.16□□□□□ -1.1
CCNH-206ENST00000508855 APLP2Q06481 763 aa8.15□□□□□ -1.1
CCNH-206ENST00000508855 AKT1S1Q96B36 256 aa8.08□□□□□ -1.12
CCNH-206ENST00000508855 GABBR2O75899 941 aa8.07□□□□□ -1.12
CCNH-206ENST00000508855 FXR2P51116 673 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCNH-206ENST00000508855 EVX2Q03828 476 aa8.06□□□□□ -1.12
CCNH-206ENST00000508855 ZNF219Q9P2Y4 722 aaPredicted RBP8.06□□□□□ -1.12
CCNH-206ENST00000508855 SLC4A1APQ9BWU0 796 aaKnown RBP7.98□□□□□ -1.13
CCNH-206ENST00000508855 EHMT2Q96KQ7 1210 aa7.93□□□□□ -1.14
CCNH-206ENST00000508855 CLCN6P51797 869 aa7.93□□□□□ -1.14
CCNH-206ENST00000508855 U3KPZ7 1027 aaPredicted RBP7.93□□□□□ -1.14
CCNH-206ENST00000508855 ABCB7O75027 752 aa7.92□□□□□ -1.14
CCNH-206ENST00000508855 C19orf67A6NJJ6 358 aa7.88□□□□□ -1.15
CCNH-206ENST00000508855 TRHP20396 242 aaPredicted RBP7.84□□□□□ -1.15
CCNH-206ENST00000508855 REM2Q8IYK8 340 aaPredicted RBP7.82□□□□□ -1.16
CCNH-206ENST00000508855 OTUD5Q96G74 571 aa7.81□□□□□ -1.16
CCNH-206ENST00000508855 ZBTB22O15209 634 aa7.78□□□□□ -1.16
CCNH-206ENST00000508855 SLC4A2P04920 1241 aa7.74□□□□□ -1.17
CCNH-206ENST00000508855 CSRNP3Q8WYN3 585 aa7.74□□□□□ -1.17
CCNH-206ENST00000508855 POTEIP0CG38 1075 aa7.73□□□□□ -1.17
CCNH-206ENST00000508855 PITPNM1O00562 1244 aa7.69□□□□□ -1.18
CCNH-206ENST00000508855 CDAN1Q8IWY9 1227 aa7.67□□□□□ -1.18
CCNH-206ENST00000508855 DCBLD2Q96PD2 775 aa7.64□□□□□ -1.19
CCNH-206ENST00000508855 FOXD4L1Q9NU39 408 aa7.64□□□□□ -1.19
CCNH-206ENST00000508855 MMRN1Q13201 1228 aa7.63□□□□□ -1.19
CCNH-206ENST00000508855 MAMSTRQ6ZN01 415 aa7.61□□□□□ -1.19
CCNH-206ENST00000508855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.6□□□□□ -1.19
CCNH-206ENST00000508855 HNRNPUL2Q1KMD3 747 aaKnown RBP7.6□□□□□ -1.19
CCNH-206ENST00000508855 FAM163AQ96GL9 167 aaPredicted RBP7.53□□□□□ -1.2
CCNH-206ENST00000508855 PRKAR2AP13861 404 aaKnown RBP7.53□□□□□ -1.2
CCNH-206ENST00000508855 MYCNP04198 464 aaPredicted RBP7.48□□□□□ -1.21
CCNH-206ENST00000508855 SPNS2Q8IVW8 549 aa7.47□□□□□ -1.21
CCNH-206ENST00000508855 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
CCNH-206ENST00000508855 ATF5Q9Y2D1 282 aaPredicted RBP7.45□□□□□ -1.22
CCNH-206ENST00000508855 ZBTB12Q9Y330 459 aaPredicted RBP7.45□□□□□ -1.22
CCNH-206ENST00000508855 SAMD1Q6SPF0 538 aaPredicted RBP7.37□□□□□ -1.23
CCNH-206ENST00000508855 POTEB2H3BUK9 544 aa7.35□□□□□ -1.23
CCNH-206ENST00000508855 SCUBE2Q9NQ36 999 aa7.32□□□□□ -1.24
CCNH-206ENST00000508855 ATXN8OSP0DMR3 200 aa7.27□□□□□ -1.25
CCNH-206ENST00000508855 POLA2Q14181 598 aa7.27□□□□□ -1.25
CCNH-206ENST00000508855 CD44P16070 742 aaKnown RBP7.22□□□□□ -1.25
CCNH-206ENST00000508855 SPDYE1Q8NFV5 336 aaPredicted RBP7.19□□□□□ -1.26
CCNH-206ENST00000508855 ZNF579Q8NAF0 562 aaKnown RBP7.13□□□□□ -1.27
CCNH-206ENST00000508855 C7P10643 843 aa7.12□□□□□ -1.27
CCNH-206ENST00000508855 SLC39A7Q92504 469 aa7.11□□□□□ -1.27
CCNH-206ENST00000508855 CCDC180Q9P1Z9 1646 aa7.09□□□□□ -1.27
CCNH-206ENST00000508855 MKRN4PQ13434 485 aaPredicted RBP7.08□□□□□ -1.28
CCNH-206ENST00000508855 OSCARQ8IYS5 282 aa7.04□□□□□ -1.28
CCNH-206ENST00000508855 METRNQ9UJH8 293 aa7.03□□□□□ -1.28
CCNH-206ENST00000508855 TMEM121BQ9BXQ6 578 aaPredicted RBP7.02□□□□□ -1.29
CCNH-206ENST00000508855 CLEC11AQ9Y240 323 aa7.01□□□□□ -1.29
CCNH-206ENST00000508855 FKBP8Q14318 412 aa7.01□□□□□ -1.29
CCNH-206ENST00000508855 POTEJP0CG39 1038 aa6.98□□□□□ -1.29
CCNH-206ENST00000508855 FBLN2P98095 1184 aa6.97□□□□□ -1.29
CCNH-206ENST00000508855 ZCCHC6Q5VYS8 1495 aaKnown RBP6.93□□□□□ -1.3
CCNH-206ENST00000508855 ST18O60284 1047 aa6.93□□□□□ -1.3
CCNH-206ENST00000508855 SPDYE2BA6NHP3 402 aa6.91□□□□□ -1.3
CCNH-206ENST00000508855 SPDYE6P0CI01 402 aa6.91□□□□□ -1.3
CCNH-206ENST00000508855 SPDYE2Q495Y8 402 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms