RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
PFDN6-204ENST00000395131 ABCC9O60706 1549 aa33.66■■■□□ 2.98
PFDN6-204ENST00000395131 CCDC180Q9P1Z9 1646 aa32.83■■■□□ 2.85
PFDN6-204ENST00000395131 DNAJC5BQ9UF47 199 aa32.55■■■□□ 2.8
PFDN6-204ENST00000395131 RB1CC1Q8TDY2 1594 aa31.69■■■□□ 2.66
PFDN6-204ENST00000395131 NACADO15069 1562 aa31.26■■■□□ 2.6
PFDN6-204ENST00000395131 PABPN1Q86U42 306 aaKnown RBP eCLIP31.16■■■□□ 2.58
PFDN6-204ENST00000395131 UNC13AQ9UPW8 1703 aa31.02■■■□□ 2.56
PFDN6-204ENST00000395131 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
PFDN6-204ENST00000395131 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
PFDN6-204ENST00000395131 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
PFDN6-204ENST00000395131 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.49
PFDN6-204ENST00000395131 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
PFDN6-204ENST00000395131 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
PFDN6-204ENST00000395131 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
PFDN6-204ENST00000395131 EIF4G1Q04637 1599 aaKnown RBP30.13■■■□□ 2.41
PFDN6-204ENST00000395131 DCAF1Q9Y4B6 1507 aa29.78■■■□□ 2.36
PFDN6-204ENST00000395131 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
PFDN6-204ENST00000395131 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
PFDN6-204ENST00000395131 CUX2O14529 1486 aa29.53■■■□□ 2.32
PFDN6-204ENST00000395131 ERCC6Q03468 1493 aa29.13■■■□□ 2.25
PFDN6-204ENST00000395131 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
PFDN6-204ENST00000395131 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
PFDN6-204ENST00000395131 NESP48681 1621 aa28.65■■■□□ 2.18
PFDN6-204ENST00000395131 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
PFDN6-204ENST00000395131 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
PFDN6-204ENST00000395131 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
PFDN6-204ENST00000395131 SMARCA2P51531 1590 aa28.47■■■□□ 2.15
PFDN6-204ENST00000395131 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
PFDN6-204ENST00000395131 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
PFDN6-204ENST00000395131 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
PFDN6-204ENST00000395131 BAZ1BQ9UIG0 1483 aaKnown RBP28.22■■■□□ 2.11
PFDN6-204ENST00000395131 PDS5BQ9NTI5 1447 aa28.21■■■□□ 2.11
PFDN6-204ENST00000395131 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
PFDN6-204ENST00000395131 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
PFDN6-204ENST00000395131 WDR62O43379 1518 aa28.02■■■□□ 2.08
PFDN6-204ENST00000395131 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
PFDN6-204ENST00000395131 OSCARQ8IYS5 282 aa27.99■■■□□ 2.07
PFDN6-204ENST00000395131 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
PFDN6-204ENST00000395131 RIMBP3CA6NJZ7 1639 aa27.73■■■□□ 2.03
PFDN6-204ENST00000395131 RIMBP3BA6NNM3 1639 aa27.73■■■□□ 2.03
PFDN6-204ENST00000395131 RIMBP3Q9UFD9 1639 aa27.73■■■□□ 2.03
PFDN6-204ENST00000395131 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
PFDN6-204ENST00000395131 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
PFDN6-204ENST00000395131 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
PFDN6-204ENST00000395131 ARHGEF11O15085 1522 aa27.53■■■□□ 2
PFDN6-204ENST00000395131 URB2Q14146 1524 aaKnown RBP27.41■■□□□ 1.98
PFDN6-204ENST00000395131 CFTRP13569 1480 aa27.4■■□□□ 1.98
PFDN6-204ENST00000395131 CYB5RLQ6IPT4 315 aa27.34■■□□□ 1.97
PFDN6-204ENST00000395131 WIZO95785 1651 aa27.33■■□□□ 1.97
PFDN6-204ENST00000395131 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
PFDN6-204ENST00000395131 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
PFDN6-204ENST00000395131 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
PFDN6-204ENST00000395131 IFT140Q96RY7 1462 aa27.2■■□□□ 1.95
PFDN6-204ENST00000395131 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
PFDN6-204ENST00000395131 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
PFDN6-204ENST00000395131 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
PFDN6-204ENST00000395131 CHD1O14646 1710 aa27.04■■□□□ 1.92
PFDN6-204ENST00000395131 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
PFDN6-204ENST00000395131 TOPBP1Q92547 1522 aa26.95■■□□□ 1.9
PFDN6-204ENST00000395131 TOP2AP11388 1531 aaKnown RBP26.94■■□□□ 1.9
PFDN6-204ENST00000395131 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
PFDN6-204ENST00000395131 AQRO60306 1485 aaKnown RBP eCLIP26.84■■□□□ 1.89
PFDN6-204ENST00000395131 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
PFDN6-204ENST00000395131 FBLN2P98095 1184 aa26.78■■□□□ 1.88
PFDN6-204ENST00000395131 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
PFDN6-204ENST00000395131 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
PFDN6-204ENST00000395131 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
PFDN6-204ENST00000395131 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
PFDN6-204ENST00000395131 SYNJ1O43426 1573 aa26.59■■□□□ 1.85
PFDN6-204ENST00000395131 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
PFDN6-204ENST00000395131 SNAPC4Q5SXM2 1469 aa26.52■■□□□ 1.84
PFDN6-204ENST00000395131 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
PFDN6-204ENST00000395131 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
PFDN6-204ENST00000395131 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
PFDN6-204ENST00000395131 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
PFDN6-204ENST00000395131 MAGI1Q96QZ7 1491 aaPredicted RBP26.48■■□□□ 1.83
PFDN6-204ENST00000395131 SOGA1O94964 1423 aa26.45■■□□□ 1.82
PFDN6-204ENST00000395131 SYNJ2O15056 1496 aa26.39■■□□□ 1.82
PFDN6-204ENST00000395131 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
PFDN6-204ENST00000395131 ILDR1Q86SU0 546 aaPredicted RBP26.28■■□□□ 1.8
PFDN6-204ENST00000395131 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
PFDN6-204ENST00000395131 KIF13AQ9H1H9 1805 aa26.25■■□□□ 1.79
PFDN6-204ENST00000395131 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
PFDN6-204ENST00000395131 ERCC6L2Q5T890 1561 aa26.18■■□□□ 1.78
PFDN6-204ENST00000395131 CUX1P39880 1505 aa26.09■■□□□ 1.77
PFDN6-204ENST00000395131 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
PFDN6-204ENST00000395131 KDM4FA0A1W2PPD8 638 aa26.07■■□□□ 1.76
PFDN6-204ENST00000395131 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
PFDN6-204ENST00000395131 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
PFDN6-204ENST00000395131 ABCA5Q8WWZ7 1642 aa26.01■■□□□ 1.75
PFDN6-204ENST00000395131 NUP160Q12769 1436 aa25.99■■□□□ 1.75
PFDN6-204ENST00000395131 ABCA10Q8WWZ4 1543 aa25.96■■□□□ 1.75
PFDN6-204ENST00000395131 ABCC10Q5T3U5 1492 aa25.94■■□□□ 1.74
PFDN6-204ENST00000395131 FAM69CQ0P6D2 419 aa25.89■■□□□ 1.74
PFDN6-204ENST00000395131 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
PFDN6-204ENST00000395131 KDM6BO15054 1643 aa25.85■■□□□ 1.73
PFDN6-204ENST00000395131 MAPKBP1O60336 1514 aa25.84■■□□□ 1.73
PFDN6-204ENST00000395131 DIP2BQ9P265 1576 aa25.83■■□□□ 1.73
PFDN6-204ENST00000395131 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms