RNA–Protein interactions for RNA: ENST00000489432.6

REPIN1-214, Transcript of replication initiator 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene REPIN1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-214ENST00000489432 NISCHQ9Y2I1 1504 aa50.02■■■■■ 5.6
REPIN1-214ENST00000489432 CCDC180Q9P1Z9 1646 aa43.97■■■■■ 4.63
REPIN1-214ENST00000489432 ABCC9O60706 1549 aa42.42■■■■■ 4.38
REPIN1-214ENST00000489432 ZCCHC6Q5VYS8 1495 aaKnown RBP41.83■■■■■ 4.29
REPIN1-214ENST00000489432 DCAF8L2P0C7V8 631 aa41.75■■■■■ 4.27
REPIN1-214ENST00000489432 DCAF1Q9Y4B6 1507 aa41.3■■■■■ 4.2
REPIN1-214ENST00000489432 NACADO15069 1562 aa41.17■■■■■ 4.18
REPIN1-214ENST00000489432 MYO15BQ96JP2 1530 aa41.12■■■■■ 4.17
REPIN1-214ENST00000489432 RB1CC1Q8TDY2 1594 aa41.04■■■■■ 4.16
REPIN1-214ENST00000489432 SCRIBQ14160 1630 aa40.4■■■■■ 4.06
REPIN1-214ENST00000489432 SHROOM4Q9ULL8 1493 aa40.35■■■■■ 4.05
REPIN1-214ENST00000489432 UNC13AQ9UPW8 1703 aa40.2■■■■■ 4.03
REPIN1-214ENST00000489432 PABPN1Q86U42 306 aaKnown RBP eCLIP39.88■■■■□ 3.97
REPIN1-214ENST00000489432 BICRAQ9NZM4 1560 aa39.79■■■■□ 3.96
REPIN1-214ENST00000489432 CECR2Q9BXF3 1484 aa38.96■■■■□ 3.83
REPIN1-214ENST00000489432 EIF4G1Q04637 1599 aaKnown RBP38.69■■■■□ 3.78
REPIN1-214ENST00000489432 BAZ1AQ9NRL2 1556 aaPredicted RBP38.69■■■■□ 3.78
REPIN1-214ENST00000489432 SUPT5HO00267 1087 aaKnown RBP38.69■■■■□ 3.78
REPIN1-214ENST00000489432 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
REPIN1-214ENST00000489432 MROH2BQ7Z745 1585 aa38.63■■■■□ 3.77
REPIN1-214ENST00000489432 RSF1Q96T23 1441 aaPredicted RBP38.49■■■■□ 3.75
REPIN1-214ENST00000489432 CC2D2AQ9P2K1 1620 aa38.35■■■■□ 3.73
REPIN1-214ENST00000489432 WIZO95785 1651 aa38.29■■■■□ 3.72
REPIN1-214ENST00000489432 ATAD2BQ9ULI0 1458 aa38.21■■■■□ 3.71
REPIN1-214ENST00000489432 DNAJC5BQ9UF47 199 aa38.19■■■■□ 3.7
REPIN1-214ENST00000489432 SMARCA2P51531 1590 aa38.16■■■■□ 3.7
REPIN1-214ENST00000489432 PEG3Q9GZU2 1588 aa38.16■■■■□ 3.7
REPIN1-214ENST00000489432 NCAPD3P42695 1498 aa38■■■■□ 3.67
REPIN1-214ENST00000489432 BAZ1BQ9UIG0 1483 aaKnown RBP37.97■■■■□ 3.67
REPIN1-214ENST00000489432 HMGXB3Q12766 1538 aa37.87■■■■□ 3.65
REPIN1-214ENST00000489432 TOP2AP11388 1531 aaKnown RBP37.83■■■■□ 3.65
REPIN1-214ENST00000489432 CCDC88BA6NC98 1476 aa37.46■■■■□ 3.59
REPIN1-214ENST00000489432 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.51
REPIN1-214ENST00000489432 NESP48681 1621 aa36.97■■■■□ 3.51
REPIN1-214ENST00000489432 CFTRP13569 1480 aa36.94■■■■□ 3.5
REPIN1-214ENST00000489432 CHIC1Q5VXU3 224 aa36.9■■■■□ 3.5
REPIN1-214ENST00000489432 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
REPIN1-214ENST00000489432 PRDM2Q13029 1718 aa36.69■■■■□ 3.46
REPIN1-214ENST00000489432 PDS5BQ9NTI5 1447 aa36.63■■■■□ 3.45
REPIN1-214ENST00000489432 FANCD2Q9BXW9 1451 aa36.6■■■■□ 3.45
REPIN1-214ENST00000489432 KIF21AQ7Z4S6 1674 aa36.51■■■■□ 3.44
REPIN1-214ENST00000489432 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
REPIN1-214ENST00000489432 CEP164Q9UPV0 1460 aa36.45■■■■□ 3.43
REPIN1-214ENST00000489432 ABCC8Q09428 1581 aa36.43■■■■□ 3.42
REPIN1-214ENST00000489432 TRIM41Q8WV44 630 aa36.33■■■■□ 3.41
REPIN1-214ENST00000489432 WRNQ14191 1432 aaPredicted RBP eCLIP36.28■■■■□ 3.47e-10■■■■■ 33.4
REPIN1-214ENST00000489432 MRC2Q9UBG0 1479 aa36.18■■■■□ 3.38
REPIN1-214ENST00000489432 URB2Q14146 1524 aaKnown RBP36.17■■■■□ 3.38
REPIN1-214ENST00000489432 CUX1P39880 1505 aa36.17■■■■□ 3.38
REPIN1-214ENST00000489432 SYNJ1O43426 1573 aa36.15■■■■□ 3.38
REPIN1-214ENST00000489432 TOPBP1Q92547 1522 aa36.09■■■■□ 3.37
REPIN1-214ENST00000489432 THOC2Q8NI27 1593 aaKnown RBP36.09■■■■□ 3.37
REPIN1-214ENST00000489432 DNMBPQ6XZF7 1577 aa36.09■■■■□ 3.37
REPIN1-214ENST00000489432 TOP2BQ02880 1626 aa36.05■■■■□ 3.36
REPIN1-214ENST00000489432 WDR62O43379 1518 aa36.01■■■■□ 3.36
REPIN1-214ENST00000489432 BIVM-ERCC5R4GMW8 1640 aa36.01■■■■□ 3.35
REPIN1-214ENST00000489432 FGD5Q6ZNL6 1462 aa35.92■■■■□ 3.34
REPIN1-214ENST00000489432 POLA1P09884 1462 aaPredicted RBP35.87■■■■□ 3.33
REPIN1-214ENST00000489432 RAD54L2Q9Y4B4 1467 aa35.77■■■■□ 3.32
REPIN1-214ENST00000489432 SOGA1O94964 1423 aa35.76■■■■□ 3.31
REPIN1-214ENST00000489432 FAM9AQ8IZU1 332 aaPredicted RBP35.76■■■■□ 3.31
REPIN1-214ENST00000489432 CUX2O14529 1486 aa35.74■■■■□ 3.31
REPIN1-214ENST00000489432 HRCP23327 699 aa35.63■■■■□ 3.29
REPIN1-214ENST00000489432 TARBP1Q13395 1621 aaKnown RBP35.61■■■■□ 3.29
REPIN1-214ENST00000489432 IFT140Q96RY7 1462 aa35.61■■■■□ 3.29
REPIN1-214ENST00000489432 LOC105371045A0A1W2PR82 267 aa35.56■■■■□ 3.28
REPIN1-214ENST00000489432 ABCA10Q8WWZ4 1543 aa35.56■■■■□ 3.28
REPIN1-214ENST00000489432 RUSC2Q8N2Y8 1516 aa35.52■■■■□ 3.28
REPIN1-214ENST00000489432 TDRD9Q8NDG6 1382 aaKnown RBP35.51■■■■□ 3.28
REPIN1-214ENST00000489432 WDR97A6NE52 1622 aa35.49■■■■□ 3.27
REPIN1-214ENST00000489432 ZNF608Q9ULD9 1512 aaPredicted RBP35.48■■■■□ 3.27
REPIN1-214ENST00000489432 KIF27Q86VH2 1401 aa35.43■■■■□ 3.26
REPIN1-214ENST00000489432 AQRO60306 1485 aaKnown RBP eCLIP35.42■■■■□ 3.262e-10■■■■■ 52.5
REPIN1-214ENST00000489432 GAPVD1Q14C86 1478 aa35.34■■■■□ 3.25
REPIN1-214ENST00000489432 EEA1Q15075 1411 aa35.33■■■■□ 3.25
REPIN1-214ENST00000489432 EHMT2Q96KQ7 1210 aa35.33■■■■□ 3.25
REPIN1-214ENST00000489432 ABCA5Q8WWZ7 1642 aa35.32■■■■□ 3.25
REPIN1-214ENST00000489432 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
REPIN1-214ENST00000489432 PCGF6Q9BYE7 350 aa35.31■■■■□ 3.24
REPIN1-214ENST00000489432 CSRNP3Q8WYN3 585 aa35.27■■■■□ 3.24
REPIN1-214ENST00000489432 IGF1RP08069 1367 aa35.2■■■■□ 3.23
REPIN1-214ENST00000489432 PBRM1Q86U86 1689 aa35.19■■■■□ 3.22
REPIN1-214ENST00000489432 GRIN2BQ13224 1484 aa35.18■■■■□ 3.22
REPIN1-214ENST00000489432 ERICH3Q5RHP9 1530 aa35.13■■■■□ 3.21
REPIN1-214ENST00000489432 SNAPC4Q5SXM2 1469 aa35.06■■■■□ 3.2
REPIN1-214ENST00000489432 CARMIL1Q5VZK9 1371 aa35.02■■■■□ 3.2
REPIN1-214ENST00000489432 CUL7Q14999 1698 aa34.98■■■■□ 3.19
REPIN1-214ENST00000489432 MAGI1Q96QZ7 1491 aaPredicted RBP34.97■■■■□ 3.19
REPIN1-214ENST00000489432 PRXQ9BXM0 1461 aa34.95■■■■□ 3.19
REPIN1-214ENST00000489432 FBLN2P98095 1184 aa34.94■■■■□ 3.18
REPIN1-214ENST00000489432 KIF21BO75037 1637 aa34.93■■■■□ 3.18
REPIN1-214ENST00000489432 ADAMTS12P58397 1594 aa34.93■■■■□ 3.18
REPIN1-214ENST00000489432 FHAD1B1AJZ9 1412 aa34.92■■■■□ 3.18
REPIN1-214ENST00000489432 GOLGA3Q08378 1498 aa34.9■■■■□ 3.18
REPIN1-214ENST00000489432 CHMP7Q8WUX9 453 aaPredicted RBP34.88■■■■□ 3.17
REPIN1-214ENST00000489432 RAPGEF2Q9Y4G8 1499 aa34.88■■■■□ 3.17
REPIN1-214ENST00000489432 SYNJ2O15056 1496 aa34.85■■■■□ 3.17
REPIN1-214ENST00000489432 UBTFP17480 764 aaKnown RBP34.83■■■■□ 3.17
REPIN1-214ENST00000489432 TRIM26Q12899 539 aaPredicted RBP34.82■■■■□ 3.16
REPIN1-214ENST00000489432 TNIKQ9UKE5 1360 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms