RNA–Protein interactions for RNA: ENST00000443217.5

LPP-207, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-207ENST00000443217 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
LPP-207ENST00000443217 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
LPP-207ENST00000443217 ABCC9O60706 1549 aa31.23■■■□□ 2.59
LPP-207ENST00000443217 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
LPP-207ENST00000443217 NACADO15069 1562 aa29.73■■■□□ 2.35
LPP-207ENST00000443217 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
LPP-207ENST00000443217 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
LPP-207ENST00000443217 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
LPP-207ENST00000443217 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
LPP-207ENST00000443217 UNC13AQ9UPW8 1703 aa29.09■■■□□ 2.25
LPP-207ENST00000443217 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
LPP-207ENST00000443217 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
LPP-207ENST00000443217 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
LPP-207ENST00000443217 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
LPP-207ENST00000443217 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
LPP-207ENST00000443217 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
LPP-207ENST00000443217 CC2D2AQ9P2K1 1620 aa28.22■■■□□ 2.11
LPP-207ENST00000443217 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.09
LPP-207ENST00000443217 NCAPD3P42695 1498 aa27.46■■□□□ 1.99
LPP-207ENST00000443217 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
LPP-207ENST00000443217 ATAD2BQ9ULI0 1458 aa27.39■■□□□ 1.98
LPP-207ENST00000443217 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
LPP-207ENST00000443217 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
LPP-207ENST00000443217 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
LPP-207ENST00000443217 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
LPP-207ENST00000443217 BAZ1BQ9UIG0 1483 aaKnown RBP27.12■■□□□ 1.93
LPP-207ENST00000443217 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
LPP-207ENST00000443217 ERCC6Q03468 1493 aa26.95■■□□□ 1.91
LPP-207ENST00000443217 CUX2O14529 1486 aa26.89■■□□□ 1.9
LPP-207ENST00000443217 NESP48681 1621 aa26.88■■□□□ 1.89
LPP-207ENST00000443217 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
LPP-207ENST00000443217 WIZO95785 1651 aa26.75■■□□□ 1.87
LPP-207ENST00000443217 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
LPP-207ENST00000443217 PDS5BQ9NTI5 1447 aa26.63■■□□□ 1.85
LPP-207ENST00000443217 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
LPP-207ENST00000443217 THOC2Q8NI27 1593 aaKnown RBP26.61■■□□□ 1.85
LPP-207ENST00000443217 DNAJC5Q9H3Z4 198 aa26.57■■□□□ 1.84
LPP-207ENST00000443217 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
LPP-207ENST00000443217 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
LPP-207ENST00000443217 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
LPP-207ENST00000443217 CFTRP13569 1480 aa26.37■■□□□ 1.81
LPP-207ENST00000443217 WDR62O43379 1518 aa26.32■■□□□ 1.8
LPP-207ENST00000443217 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
LPP-207ENST00000443217 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
LPP-207ENST00000443217 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
LPP-207ENST00000443217 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
LPP-207ENST00000443217 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
LPP-207ENST00000443217 TOPBP1Q92547 1522 aa25.83■■□□□ 1.73
LPP-207ENST00000443217 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
LPP-207ENST00000443217 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
LPP-207ENST00000443217 DNMBPQ6XZF7 1577 aa25.76■■□□□ 1.71
LPP-207ENST00000443217 ZNF608Q9ULD9 1512 aaPredicted RBP25.69■■□□□ 1.7
LPP-207ENST00000443217 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
LPP-207ENST00000443217 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
LPP-207ENST00000443217 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
LPP-207ENST00000443217 TARBP1Q13395 1621 aaKnown RBP25.57■■□□□ 1.68
LPP-207ENST00000443217 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
LPP-207ENST00000443217 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
LPP-207ENST00000443217 CUX1P39880 1505 aa25.46■■□□□ 1.67
LPP-207ENST00000443217 SOGA1O94964 1423 aa25.46■■□□□ 1.67
LPP-207ENST00000443217 FGD5Q6ZNL6 1462 aa25.45■■□□□ 1.66
LPP-207ENST00000443217 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.66
LPP-207ENST00000443217 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
LPP-207ENST00000443217 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
LPP-207ENST00000443217 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
LPP-207ENST00000443217 CHD1O14646 1710 aa25.28■■□□□ 1.64
LPP-207ENST00000443217 RIMBP3CA6NJZ7 1639 aa25.27■■□□□ 1.64
LPP-207ENST00000443217 RIMBP3BA6NNM3 1639 aa25.27■■□□□ 1.64
LPP-207ENST00000443217 RIMBP3Q9UFD9 1639 aa25.27■■□□□ 1.64
LPP-207ENST00000443217 SNAPC4Q5SXM2 1469 aa25.26■■□□□ 1.63
LPP-207ENST00000443217 ARHGEF11O15085 1522 aa25.25■■□□□ 1.63
LPP-207ENST00000443217 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
LPP-207ENST00000443217 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
LPP-207ENST00000443217 FBLN2P98095 1184 aa25.21■■□□□ 1.63
LPP-207ENST00000443217 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.62
LPP-207ENST00000443217 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
LPP-207ENST00000443217 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
LPP-207ENST00000443217 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
LPP-207ENST00000443217 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
LPP-207ENST00000443217 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
LPP-207ENST00000443217 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
LPP-207ENST00000443217 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
LPP-207ENST00000443217 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
LPP-207ENST00000443217 CLASP1Q7Z460 1538 aa25.08■■□□□ 1.61
LPP-207ENST00000443217 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
LPP-207ENST00000443217 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
LPP-207ENST00000443217 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
LPP-207ENST00000443217 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
LPP-207ENST00000443217 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
LPP-207ENST00000443217 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.57
LPP-207ENST00000443217 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
LPP-207ENST00000443217 NUP160Q12769 1436 aa24.84■■□□□ 1.57
LPP-207ENST00000443217 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
LPP-207ENST00000443217 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
LPP-207ENST00000443217 ERCC6L2Q5T890 1561 aa24.66■■□□□ 1.54
LPP-207ENST00000443217 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
LPP-207ENST00000443217 TRHP20396 242 aaPredicted RBP24.61■■□□□ 1.53
LPP-207ENST00000443217 IGF1RP08069 1367 aa24.6■■□□□ 1.53
LPP-207ENST00000443217 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
LPP-207ENST00000443217 CUL7Q14999 1698 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms